EMLSAT00000001628, EMLSAT00000001628-697475 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001628
Unique NameEMLSAT00000001628-697475
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1093888..1095612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001628 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001628EMLSAG00000001628-684394Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007125EMLSAE00000007125-716053Lepeophtheirus salmonisexon
EMLSAE00000007126EMLSAE00000007126-716054Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780403auto780403Lepeophtheirus salmonispolypeptide
EMLSAP00000001628EMLSAP00000001628Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001628

>EMLSAP00000001628 ID=EMLSAP00000001628|Name=EMLSAP00000001628|organism=Lepeophtheirus salmonis|type=polypeptide|length=150bp
MPSSTKGWDANFNFKIVLLGEGCVGKTSCVLRYVDDQFNERHITTLQASF
LNKRLNVRGKRVNLSIWDTAGQERFHALGPIYYRDANGAILVYDITDLDS
FRKVKVWIKELRKMLGNKIILVIVGNKTDIEEKRHVEPNMAEEXXVSCTY
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mRNA from alignment at LSalAtl2s128:1093888..1095612+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001628-697475 ID=EMLSAT00000001628-697475|Name=EMLSAT00000001628|organism=Lepeophtheirus salmonis|type=mRNA|length=1725bp|location=Sequence derived from alignment at LSalAtl2s128:1093888..1095612+ (Lepeophtheirus salmonis)
CGCGGGCACCTTTAAGGTTTACAGTGGATATTCTTTTATTAATGTTGTTA
CTGACTGTTTTTTGTAATGCATACAGCATGTGCATTGAAGTGCGTGAAAG
AGAAAAGAGTGAGCTCAGCTGCTCTCAAAGACTCTAGGAGCAGCAGCAGT
AGAGAGCATAAATATATTTTACTTTTTCGACTGAGTAAATGATGAATATC
CTAAGAGAAAAGCGACATCTTGTGATTGTTATAAACTGAGAATTAGAAAG
AAGTCCTCTTTTAATACTACAAAGTGAAGTGTGYCCCTAACTACAMCTSC
TGCCATACCTTATTATTAAATTACTTCAACTAATAATAGTACAGGAGCAC
TGGAATAAAGTCCATTGAAGCCTTATCAAGAATGCCTTCATCCACTAAAG
GCTGGGATGCAAATTTCAATTTCAAAATTGTATTACTAGGAGAAGGCTGT
GTTGGAAAGACGAGTTGTGTCCTTCGTTACGTCGACGATCAATTCAATGA
GCGACACATTACGACACTCCAGGTAGCTCTCTAACTCAATGTAGGATCTC
TGGGACTTTAATATGTCATAGATTTGGGTGTTGTACAGAGTTAGTTAAAC
ATATGTTCTGCTATTTGCATTTATTTAAAGTATATTTTTGAATAAAATAA
ACTCTTTTCAAATTCCTTTTGACATATTTTTACCCTCATTCAACAACTAC
AAAATAATATATTTGATAAATAACTAGTATTTAATGTAAATATACGTTTC
TATTGAGAATAGGCTTCCTTTCTGAACAAACGATTAAATGTCAGAGGGAA
AAGAGTGAATCTCTCCATTTGGGACACAGCTGGACAAGAAAGATTCCACG
CACTAGGGCCTATCTACTACCGAGATGCAAATGGAGCCATTTTAGTGTAT
GATATCACGGACTTGGACAGTTTCAGAAAAGTAAAAGTTTGGATCAAGGA
ACTAAGGAAAATGCTGGGAAATAAAATCATTCTTGTTATTGTTGGAAACA
AAACAGATATAGAGGAAAAGAGGCATGTTGAGCCGAATATGGCTGAAGAG
KAAGKAGTCTCATGTACATATTAGCTGTACAAAGATCATTATTCATCTTG
CTTTATTTTCTACTCCAGATATGCCAAGTCTGTTGGAGCTACACATTTCC
ACACATCCGCCAAGTTGAATACAGGTATTGACGAACTTTTCCTAGAACTA
ACGAAACAAATGATAAGTGTAGCTCTAAATAACAAGTCTGACAGCAAGAA
CTCCTCAGGAGAAGGAGGGACTGGAAATAGAATTCATATATTTGACGACA
CAAGTCCATCTTCTCCCAGAAATAGATGTTGCTCAGGTTCATCATGAATC
AGTTTTGAAAAAAAAATGTGTATTCCTTTCAGGTGTAATTGTGGCCTCTA
ATTTGTTTTAAATATGATCGAATATATTCTATAAGATATATAATGTATTT
AAAAGGAAAAATATCTAGTCTTTTTTAAGCCGAATGTATTTGTTGGTTTG
GAATACATGTTAGCACACAATTAAATATCCAATCAGGGATGGATCCCACC
TCTTCAAATAATATGTTATGTATGATAAATCTATATTAATTATATTTTTT
TAATGATTCAATCTGATTTTCTATCATTATATTGATTTTTTTTTTCTTAA
AAAGTATTTCTAAAAACTTAAAAAATATGTGCTGTAGACATCATTTTCAT
ACATTTCTATATATGAATATGTTCA
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