EMLSAT00000001644, EMLSAT00000001644-697491 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001644
Unique NameEMLSAT00000001644-697491
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1480128..1481226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001644 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001644EMLSAG00000001644-684410Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007202EMLSAE00000007202-716130Lepeophtheirus salmonisexon
EMLSAE00000007203EMLSAE00000007203-716131Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780780auto780780Lepeophtheirus salmonispolypeptide
EMLSAP00000001644EMLSAP00000001644Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001644

>EMLSAP00000001644 ID=EMLSAP00000001644|Name=EMLSAP00000001644|organism=Lepeophtheirus salmonis|type=polypeptide|length=341bp
MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGI
IPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDI
LTLIAISMYLFIFPMPLISENRMEHSLLRGIGLIPLLLAVALTYCWMVVR
ALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILT
IVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNI
LVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGL
VCLITGFLGLVLWTLVWLVAAEAXEKPKLLIARNPLGFQRL
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mRNA from alignment at LSalAtl2s128:1480128..1481226-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001644-697491 ID=EMLSAT00000001644-697491|Name=EMLSAT00000001644|organism=Lepeophtheirus salmonis|type=mRNA|length=1099bp|location=Sequence derived from alignment at LSalAtl2s128:1480128..1481226- (Lepeophtheirus salmonis)
ATGAAGAAATGTTGTTTTTGTCTAACACTTATTAATGGAGTTCGCTCCAT
TGGAGCCATTCTCTTTACTCTAACCCTCACGATCTTTGTGTTCTACTTAG
TGTTTATCGAATATGTACGTCTCAGAGTGTTGGAGAACTTATACGGGATA
ATTCCTTGTAGTCAACCGCGGATCGACATCATCATTGATTCCCTCTTTGA
ATATTCGCTCCTTGCCAACACTTTACTTCTAATTGTTTGCACAACAGGAT
GCACAAGATGGCTACTGGTTCCTTGGCTCACAATCTATGCCCTGGACATC
CTCACTCTTATTGCAATCTCCATGTATTTATTCATATTTCCGATGCCACT
CATTTCGGAGAATCGAATGGAACATTCTCTCCTTCGTGGTATTGGCCTCA
TTCCACTTCTACTAGCCGTAGCCTTAACATATTGCTGGATGGTCGTGAGG
GCCTTGTATACGGAAATGAATGAATCTGGGACCAACGATAATGCTCCATC
TGCTTCCATGGGCCCCGTGTCCACGAATAACAATAGTCCAAAAATCTGTT
GTCCACTAAAGCTTCGAATGGGGGTCCAAATCCTAGGAGGGATCCTCACA
ATTGTCAGTCTAAACTTACTTATTGCTCACTACTTGAAACTGGATGACGT
CATTGCGGATAAATATGAAAGACTTTTTGGAGAAAAACCTGCTGCAAGGA
TCCAGGTAAATGTAGCTATTAGGCCTTCGCTAAAAGAGCCATCCTCTTTC
ATATTTTTATTTCCTTCAACATGAATAGGTTATGATATCAAGCTCCATAG
TTTTATGTATATTTGTCAACATTCTCGTCATTTTTGGAGGCTCTGGAGGA
CGATGGAGACGTGCTCTTCTCTTGCCCTGGCTCATTGTCTATGGATTTAT
CATCATGGGTGCCATTGGGGCTCACCAATGGTTCACAACCCTATGTTGGG
TTGAGGAAAAGGTTTATGGACTGGTTTGTCTCATTACAGGATTCTTAGGA
CTTGTTCTATGGACCCTTGTATGGCTCGTTGCTGCAGAAGCGKCTGAGAA
GCCCAAATTACTCATAGCACGGAACCCTTTAGGATTTCAGAGACTGTAA
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