EMLSAG00000001644, EMLSAG00000001644-684410 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001644
Unique NameEMLSAG00000001644-684410
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916830|gb|GAXK01041545.1| (TSA: Calanus finmarchicus comp325235_c3_seq6 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 1.272e-82
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  111 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1094
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916831|gb|GAXK01041544.1| (TSA: Calanus finmarchicus comp325235_c3_seq5 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 3.366e-82
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  218 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1201
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916832|gb|GAXK01041543.1| (TSA: Calanus finmarchicus comp325235_c3_seq4 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 4.266e-82
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  244 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1227
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916833|gb|GAXK01041542.1| (TSA: Calanus finmarchicus comp325235_c3_seq3 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 5.121e-82
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  266 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1249
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916834|gb|GAXK01041541.1| (TSA: Calanus finmarchicus comp325235_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 5.121e-82
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  266 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1249
[Close]
BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916835|gb|GAXK01041540.1| (TSA: Calanus finmarchicus comp325235_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 262.307 bits (669), Expect = 1.507e-80
Identity = 168/346 (48.55%), Postives = 231/346 (66.76%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSXXXXXXXXX----XXXAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            + KCC CL+L  G R +GA+L  LTL +++FYL+ IE  R  +L +LYGIIPC+ P ID I D  FEYS++AN LL++ C  GCTRWLL+PWL +Y ++IL LI +++ +FI P+PLI +N M HS             L+LAVA+ Y W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  694 LTKCCCCLSLDQGARVVGAVLLLLTLGLYIFYLIKIEDFRDFILSDLYGIIPCTVPPIDTITDVAFEYSIIANILLVVACV-GCTRWLLLPWLVMYLVNILLLICLALGMFIIPVPLIHQN-MSHSFAYQAIRCLGFIPLILAVAIGYAWLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 1677
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916822|gb|GAXK01041553.1| (TSA: Calanus finmarchicus comp325235_c3_seq14 transcribed RNA sequence)

HSP 1 Score: 142.895 bits (359), Expect = 3.148e-39
Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 0 
Query:  146 WMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  111 WLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 653
[Close]
BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916824|gb|GAXK01041551.1| (TSA: Calanus finmarchicus comp325235_c3_seq12 transcribed RNA sequence)

HSP 1 Score: 142.895 bits (359), Expect = 7.522e-39
Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 0 
Query:  146 WMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  218 WLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 760
[Close]
BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916825|gb|GAXK01041550.1| (TSA: Calanus finmarchicus comp325235_c3_seq11 transcribed RNA sequence)

HSP 1 Score: 142.895 bits (359), Expect = 9.309e-39
Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 0 
Query:  146 WMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  244 WLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 786
[Close]
BLAST of EMLSAG00000001644 vs. C. finmarchicus
Match: gi|592916826|gb|GAXK01041549.1| (TSA: Calanus finmarchicus comp325235_c3_seq10 transcribed RNA sequence)

HSP 1 Score: 142.895 bits (359), Expect = 1.095e-38
Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 0 
Query:  146 WMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLIXXXXXXXXXXXXXXVAAEAXEKPKLLIAR-NPLGFQRL 341
            W+V+R+L+ +M ES   +  P                CCP+K++ GVQILGGIL I+S  +L+  + KLD++I+ +Y  +F  + +      ++  IVL I VNIL+I GG GGRWRR LLLPWL+ YGF I+G    H +FT+LCW EEK+ GLVCL  GF+ LVLW+LVW+V+A+  EK K +I+R +PLGFQRL
Sbjct:  266 WLVIRSLFIKMGESDKAEEDP----------------CCPMKMKTGVQILGGILAIISGVILVLFFAKLDELISRRYLTIFESEISRGTLTWMAGLIVLAILVNILLILGGGGGRWRRCLLLPWLLFYGFAIVGCFVTHIYFTSLCWREEKIIGLVCLGFGFVFLVLWSLVWIVSAQITEKTKTIISRPSPLGFQRL 808
[Close]
BLAST of EMLSAG00000001644 vs. L. salmonis peptides
Match: EMLSAP00000001644 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:1480128:1481226:-1 gene:EMLSAG00000001644 transcript:EMLSAT00000001644 description:"maker-LSalAtl2s128-augustus-gene-14.23")

HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 
Query:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSLLRGIGLIPLLLAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLITGFLGLVLWTLVWLVAAEAXEKPKLLIARNPLGFQRL 341
            MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSLLRGIGLIPLLLAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLITGFLGLVLWTLVWLVAAEAXEKPKLLIARNPLGFQRL
Sbjct:    1 MKKCCFCLTLINGVRSIGAILFTLTLTIFVFYLVFIEYVRLRVLENLYGIIPCSQPRIDIIIDSLFEYSLLANTLLLIVCTTGCTRWLLVPWLTIYALDILTLIAISMYLFIFPMPLISENRMEHSLLRGIGLIPLLLAVALTYCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMGVQILGGILTIVSLNLLIAHYLKLDDVIADKYERLFGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLITGFLGLVLWTLVWLVAAEAXEKPKLLIARNPLGFQRL 341
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BLAST of EMLSAG00000001644 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold993_size72668-snap-gene-0.15 (protein:Tk11415 transcript:maker-scaffold993_size72668-snap-gene-0.15-mRNA-1 annotation:"c-5 sterol desaturase erg3")

HSP 1 Score: 124.405 bits (311), Expect = 2.047e-34
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 0 
Query:  144 YCWMVVRALYTEMNESGTNDNAPSASMGPVSTNNNSPKICCPLKLRMG--VQILGGILTIVSLNLLIAHYLKLDDVIADKYERL-----FGEKPAARIQVMISSSIVLCIFVNILVIFGGSGGRWRRALLLPWLIVYGFIIMGAIGAHQWFTTLCWVEEKVYGLVCLITGFLGLVLWTLVWLVAAEAXEKPK 328
            Y W ++RA + E+                     NS + C   ++  G  VQ +GGI  I    LL+ +Y KLDDVI  K  ++     F  KP     ++ S        +N+++I GGSG +WRR LL+PWLI YG +++  +G HQWFTTLCWVEEK+YGL+ L+ G L L LWTLVW+VAAEA E  +
Sbjct:   25 YAWAIIRARFEEL---------------CAEEQKNSTQFC---RVSNGFFVQCVGGIFAISCSLLLLGYYAKLDDVIVRKLGQMTKMNDFQFKPIVSSFIISSIV------INLMLIAGGSGSKWRRCLLVPWLIFYGLLVLLCLGVHQWFTTLCWVEEKIYGLISLVFGILLLCLWTLVWIVAAEASETTE 192
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001644 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001644 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592916830|gb|GAXK01041545.1|1.272e-8248.55TSA: Calanus finmarchicus comp325235_c3_seq6 trans... [more]
gi|592916831|gb|GAXK01041544.1|3.366e-8248.55TSA: Calanus finmarchicus comp325235_c3_seq5 trans... [more]
gi|592916832|gb|GAXK01041543.1|4.266e-8248.55TSA: Calanus finmarchicus comp325235_c3_seq4 trans... [more]
gi|592916833|gb|GAXK01041542.1|5.121e-8248.55TSA: Calanus finmarchicus comp325235_c3_seq3 trans... [more]
gi|592916834|gb|GAXK01041541.1|5.121e-8248.55TSA: Calanus finmarchicus comp325235_c3_seq2 trans... [more]
gi|592916835|gb|GAXK01041540.1|1.507e-8048.55TSA: Calanus finmarchicus comp325235_c3_seq1 trans... [more]
gi|592916822|gb|GAXK01041553.1|3.148e-3948.22TSA: Calanus finmarchicus comp325235_c3_seq14 tran... [more]
gi|592916824|gb|GAXK01041551.1|7.522e-3948.22TSA: Calanus finmarchicus comp325235_c3_seq12 tran... [more]
gi|592916825|gb|GAXK01041550.1|9.309e-3948.22TSA: Calanus finmarchicus comp325235_c3_seq11 tran... [more]
gi|592916826|gb|GAXK01041549.1|1.095e-3848.22TSA: Calanus finmarchicus comp325235_c3_seq10 tran... [more]

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BLAST of EMLSAG00000001644 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000016440.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s128:14801... [more]
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BLAST of EMLSAG00000001644 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001644 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001644 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001644 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold993_size72668-snap-gene-0.152.047e-3441.15protein:Tk11415 transcript:maker-scaffold993_size7... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1480128..1481226 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s128-augustus-gene-14.23
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001644 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001644EMLSAT00000001644-697491Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s128:1480128..1481226-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001644-684410 ID=EMLSAG00000001644-684410|Name=EMLSAG00000001644|organism=Lepeophtheirus salmonis|type=gene|length=1099bp|location=Sequence derived from alignment at LSalAtl2s128:1480128..1481226- (Lepeophtheirus salmonis)
ATGAAGAAATGTTGTTTTTGTCTAACACTTATTAATGGAGTTCGCTCCAT
TGGAGCCATTCTCTTTACTCTAACCCTCACGATCTTTGTGTTCTACTTAG
TGTTTATCGAATATGTACGTCTCAGAGTGTTGGAGAACTTATACGGGATA
ATTCCTTGTAGTCAACCGCGGATCGACATCATCATTGATTCCCTCTTTGA
ATATTCGCTCCTTGCCAACACTTTACTTCTAATTGTTTGCACAACAGGAT
GCACAAGATGGCTACTGGTTCCTTGGCTCACAATCTATGCCCTGGACATC
CTCACTCTTATTGCAATCTCCATGTATTTATTCATATTTCCGATGCCACT
CATTTCGGAGAATCGAATGGAACATTCTCTCCTTCGTGGTATTGGCCTCA
TTCCACTTCTACTAGCCGTAGCCTTAACATATTGCTGGATGGTCGTGAGG
GCCTTGTATACGGAAATGAATGAATCTGGGACCAACGATAATGCTCCATC
TGCTTCCATGGGCCCCGTGTCCACGAATAACAATAGTCCAAAAATCTGTT
GTCCACTAAAGCTTCGAATGGGGGTCCAAATCCTAGGAGGGATCCTCACA
ATTGTCAGTCTAAACTTACTTATTGCTCACTACTTGAAACTGGATGACGT
CATTGCGGATAAATATGAAAGACTTTTTGGAGAAAAACCTGCTGCAAGGA
TCCAGGTAAATGTAGCTATTAGGCCTTCGCTAAAAGAGCCATCCTCTTTC
ATATTTTTATTTCCTTCAACATGAATAGGTTATGATATCAAGCTCCATAG
TTTTATGTATATTTGTCAACATTCTCGTCATTTTTGGAGGCTCTGGAGGA
CGATGGAGACGTGCTCTTCTCTTGCCCTGGCTCATTGTCTATGGATTTAT
CATCATGGGTGCCATTGGGGCTCACCAATGGTTCACAACCCTATGTTGGG
TTGAGGAAAAGGTTTATGGACTGGTTTGTCTCATTACAGGATTCTTAGGA
CTTGTTCTATGGACCCTTGTATGGCTCGTTGCTGCAGAAGCGKCTGAGAA
GCCCAAATTACTCATAGCACGGAACCCTTTAGGATTTCAGAGACTGTAA
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