EMLSAT00000001647, EMLSAT00000001647-697494 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001647
Unique NameEMLSAT00000001647-697494
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1607377..1608319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001647 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001647EMLSAG00000001647-684413Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007212EMLSAE00000007212-716140Lepeophtheirus salmonisexon
EMLSAE00000007213EMLSAE00000007213-716141Lepeophtheirus salmonisexon
EMLSAE00000007214EMLSAE00000007214-716142Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780832auto780832Lepeophtheirus salmonispolypeptide
EMLSAP00000001647EMLSAP00000001647Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001647

>EMLSAP00000001647 ID=EMLSAP00000001647|Name=EMLSAP00000001647|organism=Lepeophtheirus salmonis|type=polypeptide|length=271bp
MFSFNPDVLLGEDGHEEDEEGSIHDFDRMFDDEEVDKYATYEEYLDSLVS
EEDHRYLEDEDMARIIAELGYRXSGDTLSREGFNKLKYQLEESRNLISRK
KNKAIESEIVAQNNESESGNESSFLKALKTRAPLIQTGKLLSIIFMRTIK
PKKSKCGNYEYKIEISGHIDLAERQLSENWVPYLTGEKSLLPKNNSLTYF
HWNRGAGXFNSSDNFEVVARLPAAYVIHRCTGKKINITDTTEKNGWVNIP
DDTSRIAIYDLYLESDSTPLE
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mRNA from alignment at LSalAtl2s128:1607377..1608319-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001647-697494 ID=EMLSAT00000001647-697494|Name=EMLSAT00000001647|organism=Lepeophtheirus salmonis|type=mRNA|length=943bp|location=Sequence derived from alignment at LSalAtl2s128:1607377..1608319- (Lepeophtheirus salmonis)
AAATGTTTTCATTCAATCCCGATGTCCTCCTTGGTGAGGATGGACATGAG
GAAGACGAAGAAGGATCCATTCATGACTTTGATAGAATGTTTGATGACGA
AGAAGTGGACAAATATGCTACCTATGAAGAATATTTAGACTCCCTTGTAA
GCGAAGAAGATCATCGATACCTTGAGGATGAGGATATGGCGCGGATCATT
GCGGAGTTGGGCTATCGGTGATACATTTTAAAGGACTTGCTTTGTAATAT
TATCTATACATTTCTTTATAGAMCCTCAGGTGATACACTGAGCCGGGAGG
GATTCAATAAGCTCAAATATCAGCTGGAAGAGTCAAGGAATCTCATTTCT
CGAAAAAAGAACAAAGCAATTGAATCGGAAATTGTGGCTCAAAATAATGA
GTCCGAGTCCGGAAAGTATGGACTTTTTCTCCAATATCCTTTGGAATTAA
CTTTTTAATATTTTATTAATCTTTAAATATGTATAGTGAAAGCTCCTTTT
TAAAGGCACTGAAAACCCGTGCACCCCTAATACAAACTGGGAAACTCCTC
TCGATCATATTCATGCGAACCATTAAACCAAAGAAATCCAAATGTGGAAA
CTATGAGTATAAAATAGAGATATCTGGACATATTGACTTGGCAGAGCGAC
AACTATCTGAGAATTGGGTCCCTTATCTTACTGGAGAGAAAAGCCTGTTA
CCAAAAAACAATAGTCTAACCTATTTCCATTGGAATCGAGGGGCAGGAGM
ATTTAACTCATCGGATAATTTTGAAGTCGTTGCACGTTTGCCTGCAGCAT
ATGTGATTCATAGATGCACTGGTAAAAAGATAAATATAACAGATACGACA
GAAAAAAATGGCTGGGTAAATATACCGGATGACACCTCCAGAATCGCCAT
TTATGATTTATATCTTGAGTCTGATTCGACTCCTTTGGAATAG
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