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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s128 | supercontig | LSalAtl2s128:850819..857740 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001682 >EMLSAP00000001682 ID=EMLSAP00000001682|Name=EMLSAP00000001682|organism=Lepeophtheirus salmonis|type=polypeptide|length=1470bp
MSINMFKCTQSSLLIFKQLFYLFIISSVILQTLGVVTKIRYGNRERKIKE
TFRLNDKVYKAPFSSSSLTPRAGFGYSSAEPYENETPADEGANRNIKTYS
VLRKSSSPSREKVSKKKXFSSEPVDYCLKSRGQFAYPMDCSSYVNCWDST
AFIQQCFPKYLIFNPITRRCDFSSNVPRSARNCGKRFIQTEDISSSTLTD
NHLSSSRTVPEEPNSKFCTDFEHIGLECVPQEYCHNGIIVKESQGTSHTA
NRIFYGGEPELKICNGHGDICCKNANFRKGRSPDKAQPSLCPSDYTGSIS
YENDCRKFINCWKGISKVQSCAPGTLYNSASGICDFPSKSDCGTPASLIK
NSLDYDYEDEFDYSGIITPRFFLENEENTDYDDNDEDEEEEISRSGGNKV
LPAPPTSGQTIRLRGGKAPYTGYLEMFRNDKWGFVCDEGSWTIQEANLVC
KQLGFVRGLRKTTQVSRIXEERKMTEXVECSGGETSLDKCKIRYSTPGNR
YGSCKPSSNIVSITCVHDSLASCKTEGEVPWGESCYSVHTKEANFHEAQS
ICKGEGKTLLEITSQRENDLVSELLLHNKLSSDLLGEVWTGGLASKTKRS
ASYIWHGSSTFILFQNWWPGWDGRRTASSKNLYRANAKGIKFSRKFPFIE
SSLRRRRDLRLTDYYFWTLEDFSIKLPFICESKKNDIGCIIGNGDSYEGS
ATRGESGVTCLPWKSPFLTTILDKENINKLGPLQDNNFCRNPDGDIGPWC
IAPNGEFDYCDIPTCPENAEIHSDQKIIKHRCPPGHFQCQSGAQCILKEY
VCDGHEDCINGADEKEIVCSENIAFKALEDFNKYSKNRLYVAYTERWLDV
NVEACARHCLEAGDFVCRSFNYHHDKRLCTLNEEDIGSMGMKREDPEWDY
YQNINTGNFCENEELTCPSGKCLKENEICDGKSDCSDNYDERDCSDKPNV
EIRLIGGKAGPHEGRIEIKAFDYPFGGICDDGFNIGEANVVCKSLGYSLG
ASEANLNSFFGYSDGKQILMDELHCIGNETSILNCKFDPWTQHDCSNKEW
AGVRCKISQKECEPEEWRCNDSQECIPLDLLCDGEPDCVDGSDESLKQCK
TPIELRLVNGNNMTSGRVEVLFKGVWGTVCDDNFGEAEGGVVCRNLGFKN
HEALIHGQAAFEAGEGPIWIESIQCEGTESSLKECHSSSWSPSYRCKHME
DVGLECIPKEDSDKGIDRTRFDPFFKVECGKSLIKDSDLPSEPIARVAGG
RQSKPGYQPWVASVRVQGSSNSYHWCGAVILSEFHVLTVPDVQEQEFSIE
DVHFHEEYNMNKYLNNDIALIRIKPNRDESGIKFGSRVVPICLPTKNVVY
SPNLECIISGWGSTSISELGFTRFLKVAKIPYLETSKCINPRVYGEKKLS
NGMFCAGFLDGGVDSCQGDSGGGLICKTGENSSXLLGLTSWGYGCGRPNR
PGVYTKVVNYLDWIQERMTL back to topmRNA from alignment at LSalAtl2s128:850819..857740+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001682-697529 ID=EMLSAT00000001682-697529|Name=EMLSAT00000001682|organism=Lepeophtheirus salmonis|type=mRNA|length=6922bp|location=Sequence derived from alignment at LSalAtl2s128:850819..857740+ (Lepeophtheirus salmonis)
TTTCATCATTTGATTTGTCGTGTCGTCATGCTCCGATCTTATCAGACCGT
AAAGGAATGGAAATAGTTGTGCAAGACTCCATACCTACCCATGAGTGAAT
CAATACAGATTCATATAACTTTAAATATTCCATATAAATATGAATAGCAT
TGACATTAATTATAACAAAAATGTTTTATGCGTTTTAAGTTTCTGAACTT
TGACCTCAGAGATTTTCATGTATGGACTAGTTTTGTTTTTTGATTTGTTC
GCAATTCCGCTCATGAAATTTCCCCATGTTTATATATATGCATGTATTTT
CCATATTTGAGAAGCAAGAGAAGGACAGTTATTAAATGGCAATCATGCTA
CGAGTTCCAAGTACTTAATCGAATCTCGTTCACATGTTCAAATGTCAATA
AATATGTTCAAGTGTACTCAAAGTTCATTATTAATATTCAAACAACTCTT
TTACTTATTCATAATTTCTTCCGTGATCCTACAAACACTTGGAGTAGTGA
CAAAGATTCGCTATGGTAATCGAGAGCGGAAAATAAAAGAGACCTTCAGA
CTCAATGACAAAGTTTACAAGGCTCCTTTTTCATCCTCTTCCCTTACTCC
AAGAGCTGGATTCGGCTATTCATCAGCAGAGCCTTATGAAAATGAAACCC
CAGCGGATGAAGGAGCGAATCGGAACATCAAAACATATTCTGTTCTTCGT
AAATCCTCTTCTCCATCCAGAGAAAAAGTGTCGAAGAAGAAAAKTTTTAG
CTCCGAGCCAGTGGACTACTGTCTCAAAAGTCGAGGACAATTTGCATATC
CCATGGACTGCAGTTCCTATGTCAACTGTTGGGACAGTACTGCCTTTATT
CAGCAATGCTTTCCCAAATATTTAATATTTAACCCCATTACTCGAAGATG
TGATTTCTCTTCTAATGTTCCACGTTCGGCTCGTAATTGTGGCAAAAGGT
TTATACAAACTGAGGACATAAGTTCTTCCACTCTCACTGATAATCATTTA
AGTTCCTCAAGGACAGTGCCGGAAGAGCCAAATAGTAAATTTTGTACAGA
TTTCGAGCATATAGGTTTAGAATGTGTTCCTCAAGAGTATTGTCATAATG
GTATAATCGTGAAGGAGAGTCAAGGCACCTCTCATACGGCTAATAGGATA
TTCTACGGAGGAGGTTGAATTTTGTGATCCCTTTATAATATGTATGAGTC
TATATGATTTTTGCACATTTTTTTAGATCATTTTATCTTAAGCGATGTCT
AATTAATTTTATGGTTTTTAATCAGTATGGAATTGTCTAATTATATTTTT
TGCAAAAATATAATTACTGTTTAGTTACTTGAAGTTGAGGATAAATAGTG
CAAATATACCCTCATACATAGTTATAAAATATACCTATTGTTAATTCCCC
CTATCAGAGCCTGAGCTAAAAATTTGTAATGGCCATGGAGATATTTGCTG
TAAAAATGCAAATTTCAGAAAGGGTCGATCTCCAGACAAAGCACAACCTT
CTCTTTGTCCAAGCGATTATACAGGATCCATTTCCTACGAAAATGACTGC
AGGAAATTCATCAATTGTTGGAAAGGGATATCAAAGGTTCAGTCCTGCGC
TCCAGGGACTCTCTATAATTCTGCAAGTGGAATATGCGACTTTCCATCCA
AATCCGACTGTGGAACTCCTGCTTCGCTCATCAAAAATTCGTTAGACTAT
GATTACGAAGATGAATTTGACTACAGTGGAATCATAACCCCACGGTTTTT
CCTTGAGAATGAGGAAAACACGGACTATGATGATAATGATGAGGATGAAG
AAGAAGAGATAAGTCGTTCTGGAGGGAACAAAGTTCTTCCAGCACCTCCA
ACATCTGGGCAAACAATTCGTCTACGCGGTGGTAAAGCACCATATACTGG
ATATTTAGAAATGTTTCGGAATGATAAATGGGGCTTTGTGTGTGATGAAG
GCTCTTGGACGATTCAAGAAGCAAATTTGGTTTGTAAGCAACTCGGATTC
GTTCGAGGACTGAGAAAAACAACTCAGGTATCCAGTACTTTTGAATAAGT
ATTACTCTCTCGAATAACTTGATGTACTTGACCTCAAAAATGAAAGGACA
ATTTTTAATTATGTATGTATGGGTATTTTTTTAAGTACAAAAATCCTACA
ATTGGCAACGCCACTATGTAGTGTGTACGAGATTTCTGAAGAAATCCATC
AATTAATGAGAGAAAAACAAGTTTTTGATTGCAGACCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
AAAAGCAAAATGACTAAATACATGTTAAATGCGTACATAACAGATGATAA
ATCATTATTATAAGAGATGTAGATATTTCGTCTAAATAACGGCTAMWAWM
TTTTTYWAATCTCTTTWGGGCCTCMTACATGGAGGAATCAAMGAAGAGCG
AAAAATGACAGAGKCTGTTGAATGTTCCGGAGGCGAAACATCTTTGGACA
AATGTAAGATCCGTTACTCAACTCCTGGGAATCGATACGGATCGTGTAAA
CCCTCTTCTAATATTGTATCTATTACTTGTGTCCATGACAGTCTCGCATC
CTGCAAAACAGAGGGAGAGGTCCCTTGGGGAGAGTCCTGCTACTCTGTGC
ACACAAAGGAAGCAAATTTCCATGAGGCACAGTCAATTTGCAAGGGGGAA
GGGAAGACCCTGTTGGAAATTACGTCACAAAGGGAAAATGATTTGGTGTC
TGAGCTTTTATTGCATAATAAACTCTCTTCGGATCTTCTTGGGGAAGTGT
GGACCGGAGGATTAGCTTCCAAAACAAAGAGATCTGCTTCCTATATATGG
CATGGATCTTCAACTTTTATTTGTAAGTTATTTTTGCTTTTTAATCTCAT
GTCATGGTCGTAGGGATCCATAATTATCCTGTCATCAAACATAATCTACG
TAAGGTAACTCCTATTTTCCCTACCTACTGATGAAAAAGGAAATTTATAC
CTCATGTGACTTCTCTGATCTCTTCCTCAAATGGTTGTTTATCGCTATTC
ACAAATGAGTCAAATTATATGTACATAGAACGTATAAAACAAAAAAGATT
TTGCAACATCGTGTATCACGCAATTTTTTTCTCTCTCTTTAGCTAAAAAA
AAACGACCCACAAATAGCAAGTAGATGCTTTAAAAGTAAATATATCATCT
TTCAAAATTGACACTAAAAATTATTTACTCACATATTGGGTCACTTTTAT
GAAAGGGTTTAGTTTGCATGTCTAAAAGCTATTCCATTATAACTCAAAAT
ACCAGATAATAATTTATCAATTATGTTAGTGAATAAAAGATTAATTTTTA
AACATTCTGTGATTAGTATTTCAGAACTGGTGGCCAGGTTGGGATGGCCG
AAGAACGGCAAGCAGCAAAAATTTATATAGAGCAAATGCAAAGGGTATTA
AATTTAGCCGAAAGTTTCCTTTTATCGAGTCATCCCTTCGACGAAGAAGG
GATCTTCGCTTAACCGACTATTACTTTTGGACCCTTGAAGACTTTTCCAT
TAAACTTCCTTTTATTTGTGAGAGTAAGAAAAATGATATTGGATGCATAA
TTGGTAATGGAGACTCCTATGAGGGATCTGCAACTCGTGGAGAGAGTGGA
GTCACGTGTCTCCCTTGGAAGTCTCCTTTTTTGACAACCATTTTGGATAA
GGTAATGATTGCTTAATATCGCATCGAATTGATTTTATCTTCCTACCACA
TATATAGGAAAATATTAATAAATTAGGACCGCTTCAAGACAATAACTTTT
GTCGTAATCCGGATGGGGATATTGGACCGTGGTGCATAGCTCCAAATGGG
GAATTTGACTATTGTGATATTCCTACATGTCCTGAAAATGCTGAGATCCA
TAGTGATCAGAAAATTATTAAGCATCGGTGTCCTCCCGGACATTTTCAAT
GTCAATCCGGCGCCCAATGTATTTTGAAAGAGTATGTTTGTGATGGACAT
GAGGACTGCATAAATGGTGCAGATGAAAAAGAGATTGTTTGCTCTGAAAA
TATTGCATTCAAAGCCCTTGAAGATTTCAACAAATACTCTAAAAATAGAT
TGTATGTTGCTTACACTGAGAGATGGTTGGATGTGAATGTGGAAGCGTGT
GCAAGGCACTGTTTAGAAGCTGGGGACTTTGTTTGCAGGTCCTTTAACTA
TCATCATGATAAAAGATTATGTACATTAAATGAAGAGGACATTGGATCCA
TGGGAATGAAACGTGAGGATCCAGAATGGGACTACTATCAAAATATCAAC
ACGGGTAACTTTTGTGAAAATGAAGAGTTGACATGCCCATCAGGGAAATG
TCTCAAAGAGAATGAGATCTGTGACGGCAAATCCGACTGCAGTGATAATT
ATGATGAGAGGGATTGTTCAGACAAGCCCAATGTTGAAATACGATTAATT
GGTGGCAAGGCAGGGCCTCATGAAGGTAGAATTGAAATAAAAGCGTTTGA
TTATCCTTTTGGAGGGATTTGTGATGATGGATTCAACATTGGAGAGGCCA
ATGTAGTATGCAAATCCTTGGGATATTCATTGGGAGCCAGTGAAGCAAAC
TTGAATTCCTTTTTTGGCTATTCGGATGGAAAACAAATTCTTATGGATGA
ACTCCATTGCATAGGCAATGAAACATCAATATTGAACTGTAAATTTGATC
CCTGGACCCAACATGATTGTAGTAACAAGGAATGGGCAGGTGTTCGTTGT
AAGATCTCCCAAAAAGAATGTGAACCCGAGGAATGGAGATGTAATGATAG
TCAAGAGTGTATTCCTTTGGACTTACTCTGCGACGGAGAACCAGATTGTG
TTGATGGCAGTGACGAATCTCTAAAACAATGCAAAACTCCAATCGAGCTT
CGATTGGTGAATGGAAATAATATGACCTCCGGGAGAGTTGAAGTACTCTT
TAAAGGTGTTTGGGGAACAGTTTGTGATGACAATTTTGGAGAAGCTGAAG
GAGGAGTGGTCTGTCGAAATTTGGGCTTCAAAAATCATGAAGCCCTTATT
CATGGACAAGCTGCCTTTGAAGCAGGAGAAGGGCCCATTTGGATAGAAAG
TATTCAATGTGAAGGAACAGAGTCCTCTCTAAAAGAATGTCATTCCTCTT
CGTGGTCGCCTTCATATCGATGTAAACATATGGAAGATGTTGGACTTGAG
TGTATACCCAAAGAGGACAGGTAACAAATAGTCAAATTAATCCCTATTTT
TAAGACAAGTATTGATTTTGTGTTTAGCGACAAAGGAATTGACAGAACGA
GGTTTGATCCCTTTTTTAAAGTGGAGTGCGGAAAATCCTTAATCAAAGAC
TCGGATTTACCCAGTGAACCCATTGCTAGAGTGGCTGGAGGACGKCAATC
CAAACCAGGATATCAACCATGGGTTGCAAGTGTTAGAGTTCAAGGATCAT
CTAATAGCTATCACTGGTGTGGAGCTGTGATTTTGTCTGAGTTCCATGTG
TTAACGGTTGGACATTGTATGGAAGATTATCCTAAGGATGTTTATAAAGT
CCGAGTTGGGGATTGGGACATGGAGGKGAGGCCCTTCGAATGATTTTATT
ACGAAAATTCATTCATTTTGAAGCCCCATTTATATATATATATAGAGAGA
GAGAGAGAGCGAAAATGAATGACCCCTTCAGCTCATAGATAATTTAATGC
CTTCCATTCATTTATACATGTATAGGTACCAGATGTTCAAGAACAAGAGT
TCTCCATCGAGGATGTACATTTCCACGAAGAGTATAATATGAACAAATAT
CTCAATAACGACATAGCCCTCATTCGAATTAAACCAAACCGTGACGAAAG
TGGTATTAAATTCGGAAGCCGCGTCGTACCCATTTGTCTCCCCACTAAAA
ATGTAGTCTACTCTCCCAACTTGGAGTGCATTATTTCAGGTTGGGGATCC
ACGAGTATCTCGGAACTAGGATTTACACGGTTCCTTAAGGTGGGTTATTC
CGAGTCTGAGCAAATTTGGAATGTTACTTATAAGATCAAATTAAAAGGGA
TTTGAAAAAAGCGTGACGAATGAATGAAATTGAATCCCTGCCACGTTTTT
TGTGGGTCTAAAAGAGTGGATTTGAGGCTTCTTTGTTCCCTTATTATAGA
AACATATACAAAATATAATTTATGTAAATGGAGTCTTGTTTATTTAGGTG
GCCAAGATCCCATATTTGGAGACGTCCAAATGCATCAATCCTCGTGTCTA
TGGTGAGAAAAAGTTGAGTAATGGTATGTTCTGCGCGGGATTTTTAGACG
GCGGAGTGGATTCTTGTCAGGGAGACTCCGGTGGAGGGCTTATATGTAAA
ACAGGAGAGAATTCTTCAKCACTCTTAGGACTCACATCCTGGGGCTATGG
ATGTGGACGACCCAACCGACCAGGGGTTTATACAAAAGTTGTAAATTACT
TGGATTGGATCCAAGAACGAATGACTTTATAGTCGGAATCATATTTGTGT
GATTATAGCCCGGGAAAGGAGGAAGGGGTTATTCCTTTCGGCCCATTTAC
ATATATATTATACACTACATAGAGGATATTCTGACATACATATATTTATT
CTTACTGAATTCATTAAATTTCAAAGAAAAACGTGATCAAAAATTTAATA
ATCAAATAAAGAAACATAAAGGACTTACATCACACATTATTTATTCCTCT
GTCTGTAGGGATATAGTTTTAATCACTCATAGAAAACGGGGAAACAAATA
TTTGTTACGTATCGGGTGAATATTTACATACACAGGGCACCGCAGAAACA
ACTCCCTGGGTCAAGAGGGAATCAACACACGACTACTCAACTAAAACGAC
TCGAAAGGAACGTAATGTCAAG back to top
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