EMLSAT00000001726, EMLSAT00000001726-697573 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001726
Unique NameEMLSAT00000001726-697573
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1299supercontigLSalAtl2s1299:86750..87422 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001726 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001726EMLSAG00000001726-684492Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007608EMLSAE00000007608-716536Lepeophtheirus salmonisexon
EMLSAE00000007609EMLSAE00000007609-716537Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771785auto771785Lepeophtheirus salmonispolypeptide
EMLSAP00000001726EMLSAP00000001726Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001726

>EMLSAP00000001726 ID=EMLSAP00000001726|Name=EMLSAP00000001726|organism=Lepeophtheirus salmonis|type=polypeptide|length=160bp
MNITNSNPVIRPKTSILDKSLSRGKQEVSSSAFALLFSEIVQYYQSRSST
VSELQNHLHAHGWEIGARCLDLILIRDRPSAKREIKLLNVLLTSEPLLNR
YISVPKDKGSLNCASFAAGIIEAVLDGCNFPAKVSAHWHKGTTFMVKFQD
HVIARDKLID
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mRNA from alignment at LSalAtl2s1299:86750..87422-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001726-697573 ID=EMLSAT00000001726-697573|Name=EMLSAT00000001726|organism=Lepeophtheirus salmonis|type=mRNA|length=673bp|location=Sequence derived from alignment at LSalAtl2s1299:86750..87422- (Lepeophtheirus salmonis)
ATAGAGAAATCCGATATGAATATAACAAATAGTAATCCCGTGATTCGTCC
CAAGACAAGCATTTTGGACAAGAGTCTCAGTCGTGGGAAGCAAGAAGTAT
CTTCATCAGCATTCGCTCTCCTCTTCTCCGAAATTGTTCAGTATTATCAG
TCCCGAAGCTCGACTGTATCAGAACTACAAAACCATTTGCACGCCCATGG
TTGGGAAATCGGTGCTCGTTGCCTGGATTTAATATTGATACGAGATAGAC
CTTCAGCCAAGAGAGAAATCAAGTTACTCAATGTTCTCCTCACTGTGAAG
TCCACACTTTGGAAGGCTCTTTTTGGGAAGGAGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCTGATAAATTGGAGCATGCGAACGATGATGAAAA
GACTTATTACATCATTGAGTCCGAGCCACTTTTAAATCGTTATATATCCG
TACCCAAGGATAAAGGGAGTCTGAACTGCGCATCATTTGCTGCAGGGATC
ATTGAAGCCGTTTTGGACGGTTGTAACTTTCCAGCTAAAGTCAGTGCTCA
TTGGCATAAAGGAACTACTTTTATGGTCAAGTTCCAGGATCATGTCATTG
CTCGTGATAAACTCATTGATTAA
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