EMLSAT00000001735, EMLSAT00000001735-697582 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001735
Unique NameEMLSAT00000001735-697582
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12supercontigLSalAtl2s12:1109718..1111195 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001735 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001735EMLSAG00000001735-684501Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007659EMLSAE00000007659-716587Lepeophtheirus salmonisexon
EMLSAE00000007660EMLSAE00000007660-716588Lepeophtheirus salmonisexon
EMLSAE00000007661EMLSAE00000007661-716589Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780431auto780431Lepeophtheirus salmonispolypeptide
EMLSAP00000001735EMLSAP00000001735Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001735

>EMLSAP00000001735 ID=EMLSAP00000001735|Name=EMLSAP00000001735|organism=Lepeophtheirus salmonis|type=polypeptide|length=293bp
MIYLVRNATRSIQLHLRGMSTGVSLNYTKYQGNDELSPLLITHGLLGTSK
NWSAITKKIRKRTDRTVVIFDARNHGKSPWTLSLSYEGMVADLRKLYDSL
NLRKAILMGHSMGGRTLLGFALVYPELVDKLISVDISQIPLERTKNIILD
KYIYVEGLRNVKIPQNISLFDXRSDIKKQLHPYVSEIGIREWLSLNLYKD
SQGVSRWNVNIEALGKDELRNIAEFPKQWIDLKSNVPVLFICGEKSGFIQ
KEDHEAIQTQFFESTITYLPGTSHWLHAEKPNEFTETVLKFIS
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mRNA from alignment at LSalAtl2s12:1109718..1111195+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001735-697582 ID=EMLSAT00000001735-697582|Name=EMLSAT00000001735|organism=Lepeophtheirus salmonis|type=mRNA|length=1478bp|location=Sequence derived from alignment at LSalAtl2s12:1109718..1111195+ (Lepeophtheirus salmonis)
TTAGAGTGAGACAGCTATATAATTTTAATGGGAAGATCCATTCTTGAATG
ACTGATCCAGAATTAAACGCCATTTTATAATAATAAATAAGAGATTTCGC
CTCTTCGTACGGTTTTTGATTTTCTGTTGTTATGATCTATCTTGTTCGGA
ATGCGACTCGATCCATTCAGCTTCATTTGCGTGGAATGAGCACGGGCGTA
AGTCTTAACTACACAAAATATCAGGGAAATGATGAATTAAGCCCACTTCT
GATAACACATGGACTCCTTGGCACGAGTAAAAATTGGAGTGCAATTACTA
AAGTATATTGTTTAAATTATAGAATATGTTGAAATACATAATTATCCAAG
TTGATAATAATTTAGAAAATACGGAAAAGGACGGACAGAACAGTCGTTAT
ATTTGACGCTCGAAATCATGGTAAAAGTCCTTGGACATTAAGTTTGAGCT
ACGAGGGAATGGTAGCAGATCTTAGAAAGTTATATGATAGCTTGAACTTA
AGAAAAGCTATTCTTATGGGTGTGTTTTTGTATTGTTTAAAAATTAATTA
TAATTAACTCCTTGTTAGTTATTGTACATAATGAGTTGTCAATAACAAAT
TTCTTAGAAATTACTAACTATGGTTATAAAACACTTATATAAATAATTAT
ATCCATCTATATTTTTATCATATGAGCGCAAAAGAGTGATATTAATATTC
CGTCTCTAACTGCAGGTCATTCCATGGGGGGTCGAACACTTTTGGGGTTT
GCACTAGTATATCCTGAACTAGTAGATAAATTAATAAGCGTGGATATATC
TCAAATTCCATTGGAAAGAACGAAAAATATAATTCTCGATAAATACATTT
ACGTAGAAGGTTTACGGAATGTTAAAATACCTCAAAATATCTCCCTCTTT
GACMCTCGATCCGATATTAAGAAGCAATTGCATCCATATGTTTCCGAAAT
AGGAATAAGGGAATGGTTATCATTAAACTTATATAAAGACTCTCAAGGTG
TTTCCCGTTGGAATGTAAATATTGAGGCCCTTGGGAAGGACGAACTGAGA
AATATTGCAGAGTTTCCAAAGCAATGGATTGATTTGAAGTCCAATGTTCC
AGTTTTATTCATTTGTGGGGAAAAGTCGGGTTTCATTCAAAAAGAAGATC
ATGAAGCGATTCAAACTCAATTCTTTGAGTCAACTATTACCTATCTTCCT
GGAACTAGTCATTGGTTACATGCAGAAAAGCCAAATGAGTTCACAGAGAC
TGTTTTAAAATTTATTTCTTAAAGAAATTATCCAAGTTGTGACATTTCTT
TTGGTCATTCTTCTATTAGATTTCCATGGTCATTAAAAAAAAAACGTGAC
GTGTATTGAGTATTAAGTGGACTGATTACATTCATCATGTATTTAGATTT
TGATTCACATAAACAAAGACTCTGCAATATGAAAGTTAAGTTTGTATTTA
TTTTTGTTTCATTCTATAGCTTTTTCAA
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