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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s12 | supercontig | LSalAtl2s12:1397686..1403106 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001750 >EMLSAP00000001750 ID=EMLSAP00000001750|Name=EMLSAP00000001750|organism=Lepeophtheirus salmonis|type=polypeptide|length=871bp
MDIGHRVASAVLKHYQDVVPRKWKPRNGEWTVLSAFILEDVGSGTLEVVS
LGSGTKCLGVXQLSLQGDAIHDSHGEVLARRGFKRYLLSEVLKFNESKTG
ILGSKEDFKAFPKKIHFFSTRLPCGDATIIPMIADGPSKSKKSRVEGPDI
HRTGAKCVANQVMMDEHLPGVGYHVVGAVRTKPGRGSPTKSLSCSDKMLK
WNYFGTCGDILKRFWFPSGLHWSSITINCQIEDKDSIKESLQRALIDRCS
APFDDPSPLICTSHLSFEYDLKMDESNKASPCANSICWSKVANEPLAMLS
EGRKFGLAKKHYSSRKSILPISRLKLAEFALHIMMQEKSDRISYIWSKKN
IKYSDMKPSKETDLRLVMPQLWPDKTLKGINEFLVKKMQVTIISNEDSSP
YMNTLRNEFFLSFIKPNTHSIEEMQQIFCKLKFDPVIIHKDCIINDIDCF
DKKAGYNPTWIIITESDNNEKDKSESLFHKYIYRKDKRFQIKLIEQLRFI
VHGIMEKGSNLFEEVKYPILYSNFTPHDVCSDLGNASNIACDKNHPIESM
SEVLIFILNSVINKSPGSIFNCLDEFMNEMESLICEYKKILNVYMYPINE
ETGSSHILSHQYTSSILGWKNHSHWNLRSVGDIPKDYKEIFSKDKDPKKN
PISQMDSNNLSALKQLSVLSDKPKKLEKKRIFSTKYSCYICKKGDWNSYH
ALKRHQLRSHVGRNGLLNTKFNNINIETSHDIQPESSHVIHKNKLIRGTD
KSFICTLCDKKYTSNYQLKIHTRNIHDGIVVNCRKCGKQVKSLVYHKKVC
QITYPCVKCDKIFNYNSSLKDHIESIHEGIKHICSFCGSKHATKRGLNKH
MRVTCQGIDKVKDLSEKNKLS back to topmRNA from alignment at LSalAtl2s12:1397686..1403106+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001750-697597 ID=EMLSAT00000001750-697597|Name=EMLSAT00000001750|organism=Lepeophtheirus salmonis|type=mRNA|length=5421bp|location=Sequence derived from alignment at LSalAtl2s12:1397686..1403106+ (Lepeophtheirus salmonis)
CTCTTATCGACACACATAAAATTGTTGTTGCATAACTTCATTAAGTATGT
AATGATTTGTAATCATAACAAACTTACGTCATATCGATTGTATGTAATCA
ATAATCATGGCTGGYTTCTCGGACGCAGTTAAGGTTTTGAGAGGAGTGGA
GAGTGTTGCAAGAAGAGTCCCTCCAGTTCTGAACTCAAGTGTCAAAGCGC
CTTTGGAAAGAGATTTGAAAGCATGGGGAAGTTGTCTCAGGCAAATAGAA
CTCAAAAACTTAAATCTCCCTTCAAATCGAATTTTGTCTCTCATTGCCAA
AAATGCAGAAGTATTTTACAAAGTTTCCTCAGATCGGAAGACATCCGTAT
CTCAAGACATCCCTTTGACATCCGAAAAGTCCCCCATGACTTCAGACCCT
CTACTACCTCAAAAAATTCATGAGAATCCCCTCATTGAAATTCCTTCTAA
AACAGAAGAATCCCTTCAGTTGAACCCAGAAACAACCTCATTAGACATAC
TTAAAATGGATCTTACAGKCCCTCAAGCCCTTAAAGAGAGAGTATATGTC
CAACATTCTGCCAAACCCATCTCTGCTACGCCACCCAAATCCAGACTCTC
TACGACATCTAATGAAAGAAGAATCCCCTCGTCGCGAATTGGTCGAGTTA
TGGCATTTGGTAATCTTGGACTTGGTCTGGGCATGGGAACAATTGTGGAA
GCCTCCAAGCGTATCATTCAAACTGGATCACTCTCAGGAGATACACTTGG
TTTTTTACTCAATGAATCAAATGCTGAGCGAATTGTTAAAACTCTTTGTC
GAGTTCGAGGAGCGGCTCTGAAAATAGGGCAGATGCTTAGTATTCAAGAT
GAGACACTTGTTAGTCCAGAATTGCAAAAGATATTTGAACGAGTGAGGCA
GTCTGCAGATTATATGCCTCCTTCACAAATGGAGGTATATAGAATCCCTC
CCTTGAACAGCTCATGTTCGATACATAGGTACATATTTAAAAATTTGATT
TTCGTTTCAGAAAGTCATAGCAGAAGAACTTGGCCCAGATTGGCGATCCA
TGTTTGCTTCATTTAATGAAACTCCCTTTGCCGCTGCCTCAATAGGACAA
GTTCATACTGCTACTCTCCACGATGGTCGCTTCGTTGCTGTGAAAATTCA
ATATCCGGGTGTTGCACAGAGTATCAAGAGTGATATTCAGAATTTACTCA
CGGTTTTAAATGTATCAAAGATAATACCAGAAGGGTTTTTCCTTAATTCT
GTTATTACTCAAATGGAAATAGAATTAGAGAATGAATGTAATTATTACAG
AGAAGCAGAATGCTGTGAAAGGATGCGAGAAATGCTTCATGCACAGTCCT
CTTCTGTATATTATGTCCCAGAGGTGATCAAATCTGTTTCCTCTGAAAGG
ATCCTAACAACTGAACTTTTGGAAGGACTCACATTTGACGAATGTGTGTC
ATTAAATCAGGAAACGCGAAATTACATTGTTGAGTCTGTCATCAAATTGG
TTTTACATGAACTTTTTATTTATCGCTATATGCAAACGGATCCAAATTGG
GCCAACTTTTTATATAACGACAAGACAAAGCAGTTAGGTCTCCTGGATTT
CGGAGCTACCCAAGAATACTCTGCCTCTTTTGTTAGAGATTATTTTGAAA
TCATAGATGCTGCTGGAAGACTCAATGATCGCAAGAGGGTTCTTGAATAT
TCAAGGAAAATTGGTTTCCTCACAGGCTATGAATCAAATGTTATGAATGA
GGCTCATGTGGATTCTGTAATGATTCTTGGAGAATGTTTTCGCACTCCAG
GAATCTACGATWTTGGTGAACAGCAAATTACTTTAAGACTGCAAGAAAAA
ACTGTCGTTATGATCAAGAATCGTCTTTGTGCACCTCCTAATGAAATTTA
TTCTCTCCACAGAAAAATGTCCGGTATATTCCTTCTTNGCTGCTAAATTA
AATGCAAAAGTTGACTCTAATATGATTTGGAGGGATATTGTTGAAAAATA
CAATGTAATTAAAAACTCAAAGGATTTTAATGAAGAAACGCTAACCAGTA
ATTAACTACGCAAATGAATAATAGTTTGGTCCTTATTTATTTTGCAATTC
AATTGCATGCATTAATCATTATTTATTATGTTATGTTTTTGTAACGGAAT
AGAGTAAAACTATAGCTTAGATATTACCAAGGTTTTTACCTTATATGTTA
TGTTAAATAGACCTTAGATATTACCCTAGACTTATTTTACGTTGTTGAAT
CAGAATGCAGATTTGAGGTTGCGTGATAAAAAAGAATTCTATTATATTGG
GTCCATTTATTTAGCTAAATAAATAAGATATCCTAACGAAAAATCAAATG
TGAGATGTCTTATCGAATTCACATTGAGTTCCTTTAAATAGAATTAAGTG
TGTGCAACAGGATGGATATTGGACACAGAGTCGCTTCTGCTGTATTAAAA
CATTACCAAGACGTTGTTCCTCGTAAATGGAAGCCTCGAAATGGAGAATG
GACAGTTTTGTCTGCCTTTATCCTTGAGGATGTTGGAAGTGGGACCCTTG
AAGTTGTGTCACTGGGGTCTGGGACCAAATGTTTGGGCGTGMCTCAACTA
TCTCTCCAAGGGGATGCCATCCATGATTCCCATGGTGAAGTACTGGCTCG
AAGAGGTTTTAAGCGATATTTGCTCTCAGAAGTCTTAAAATTTAATGAGT
CAAAGACTGGAATACTTGGTTCTAAGGAGGACTTTAAGGCTTTTCCCAAA
AAAATTCACTTTTTTTCGACACGTCTTCCATGTGGAGATGCAACAATAAT
TCCAATGATTGCGGATGGCCCCTCCAAATCCAAGAAATCCCGCGTTGAAG
GCCCAGATATTCATCGAACTGGTGCTAAATGTGTTGCTAATCAAGTTATG
ATGGATGAACATCTCCCTGGGGTAGGCTATCATGTTGTTGGTGCTGTTAG
AACAAAACCTGGACGAGGTTCTCCCACAAAATCACTCTCATGCTCGGATA
AAATGCTCAAGTGGAATTATTTTGGAACATGTGGAGATATTTTAAAACGA
TTTTGGTTTCCATCGGGACTACATTGGTCGTCTATAACTATTAATTGTCA
AATAGAAGATAAGGATAGCATCAAGGAGTCACTGCAAAGGGCCTTGATTG
ATCGATGCTCAGCACCTTTTGGTGTAGCGATAACGGATATCATACTTGAC
TTTCTTTTCCCCCATAATATATCTATTGGATATTTGTCCACATTTTATAA
CACTATAAAGAAAATGTATGATATGTTATCGTTACGATTTAGTTTTATTT
TCAGACGATCCATCTCCCCTGATTTGTACAAGTCATCTGAGCTTTGAATA
TGATTTAAAAATGGATGAAAGCAATAAAGCATCTCCATGTGCCAATTCCA
TATGCTGGAGTAAGGTTGCTAACGAACCACTCGCAATGCTCTCTGAAGGA
CGTAAATTCGGTTTAGCTAAAAAACATTATAGTTCTAGAAAATCTATTTT
GCCAATAAGTCGTTTGAAACTAGCTGAGTTCGCTCTTCATATCATGATGC
AAGAGAAAAGTGATAGAATCAGCTATATTTGGAGTAAAAAAAATATCAAG
TACTCTGATATGAAGCCTTCTAAGGAAACTGACCTTAGATTAGTCATGCC
TCAATTATGGCCCGATAAGACACTAAAAGGTATGAAATAAGAAATATTGA
TGGAGTTAATTAATTAATGTCAATTTTCTTCTCATTGTAGGAATTAATGA
GTTCCTCGTCAAGAAAATGCAGGTAACAATCATTAGCAACGAGGATTCTT
CACCCTACATGAATACACTGAGAAATGAATTTTTCCTATCATTTATTAAA
CCAAACACTCATTCTATCGAAGAAATGCAACAAATATTTTGTAAATTAAA
ATTTGATCCCGTCATTATTCATAAAGACTGTATTATCAATGATATAGATT
GCTTCGACAAGAAGGCGGGTTATAATCCTACTTGGATAATCATCACAGAG
AGTGATAATAATGAAAAGGATAAATCGGAATCGTTATTTCACAAATATAT
TTATAGAAAAGATAAAAGATTTCAAATTAAACTGATTGAACAATTAAGAT
TTATTGTTCATGGTTATGAAACTAATTAATATCTATGATTTTTCAGGTAT
CATGGAAAAGGGCTCAAATTTATTTGAAGAGGTGAAATATCCTATCTTAT
ATTCAAATTTTACTCCTCACGACGTGTGCTCAGATTTGGGCAACGCTTCA
AACATAGCTTGTGATAAGAATCATCCCATTGAATCTATGAGTGAAGTACT
CATCTTCATTTTGAACTCAGTTATTAACAAATCACCAGGATCTATTTTTA
ATTGTTTGGATGAATTTATGAATGAAATGGAGTCATTGATTTGCGAGTAT
AAAAAAATATTAAACGTGTATATGTATCCTATCAATGAAGAAACGGGTTC
GAGCCATATATTATCTCACCAATATACATCAAGCATACTTGGATGGAAGA
ATCATAGCCATTGGAATTTAAGATCTGTTGGAGATATTCCTAAGGATTAT
AAGGAAATATTTTCTAAAGATAAGGATCCCAAAAAGAACCCTATTTCTCA
AATGGACAGCAACAATTTAAGTGCCCTGAAACAATTATCTGTTTTGAGTG
ACAAACCCAAGAAATTAGAGAAAAAAAGAATATTTTCTACCAAATACTCA
TGTTATATCTGTAAAAAAGGCGATTGGAATTCTTATCATGCTCTGAAACG
ACATCAACTCCGAAGCCATGTTGGTAGAAATGGACTTTTAAATACAAAAT
TTAATAATATTAATATCGAAACTAGCCACGATATTCAGCCAGAGAGCTCA
CATGTCATCCATAAAAACAAATTGATAAGAGGAACAGACAAATCCTTCAT
TTGTACTCTTTGTGACAAAAAATATACATCTAATTATCAACTCAAGATCC
ATACACGTAATATCCACGATGGAATAGTTGTCAATTGTCGTAAATGTGGA
AAACAAGTGAAGTCACTTGTATATCACAAAAAAGTTTGTCAGATAACGTA
TCCGTGTGTTAAATGTGATAAAATTTTTAATTATAATTCAAGTTTGAAAG
ATCATATAGAGTCCATTCATGAGGGCATAAAACATATTTGTTCTTTCTGT
GGGTCGAAACATGCGACAAAGAGAGGTCTTAATAAACATATGAGAGTAAC
ATGTCAAGGAATTGATAAAGTAAAAGATTTAAGTGAGAAAAATAAATTAA
GTTAGCATTATTCAAAGTACATATTTCATTTAAATTTGAAAGTGTGAGTT
AGCTCATCTATTTCATCTGAGAGTGTATTTGTTGTTCCAAATAAAGAGGA
TAGCGGGTTTTTGGACTTTACTTTTGAATACATGACGTAAACAGTTTGTC
CGAAATTTGAAAGTATCCAGG back to top
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