EMLSAT00000001767, EMLSAT00000001767-697614 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001767
Unique NameEMLSAT00000001767-697614
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12supercontigLSalAtl2s12:618110..621790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001767 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001767EMLSAG00000001767-684533Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007827EMLSAE00000007827-716755Lepeophtheirus salmonisexon
EMLSAE00000007828EMLSAE00000007828-716756Lepeophtheirus salmonisexon
EMLSAE00000007829EMLSAE00000007829-716757Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778928auto778928Lepeophtheirus salmonispolypeptide
EMLSAP00000001767EMLSAP00000001767Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001767

>EMLSAP00000001767 ID=EMLSAP00000001767|Name=EMLSAP00000001767|organism=Lepeophtheirus salmonis|type=polypeptide|length=1068bp
MTDNKYSIDYAKRPAGCKKCKEKMLKGALRIAKITAXPFSDDGEMKLFHH
PACIFQTFQRVRPNTKIIEEPGDLEGWESVTAEDKEMVLTLIREAAKXSS
DNKASKKKAPTPKKKTPSKEKSPSLLEGSPSPMKEDNERPKXGDPACKDN
SFSEFIRLCNKIADEPSYNAKTEIMAKFFRHNKFEGDLHVWIRLLLPGVV
KRVYNLQSKTLVKIYSKIFEESEDEMLEDLEAGDVAGTIATFFEKSESFS
PLKKSSLNVFEVDSFLKGLCGITTEDKQMYELKKITKKCTLEDLTFIIRL
IKGDLRMQAGSKPVLTALHPDAYEAFNSSRNVDKVIESVLTLRSGGDPKG
TLNVGATLMNPIQPMLAQACKSVDMAFKKFPKGMYSEIKYDGERVQLHKR
GKEFAYFSRSLKPVMAHKVKIFKEYIPEAFPDGSDLILDAEVLMVDNKTG
DPLPFGSLGVHKGSGFKDATPCLFIFDCIYYNGENLMDKPIHDRRKLLSQ
HMVEVGNYIKFSEMKVIKKKSELGEMIQDVLKKGLEGLVLKDINSTYEPG
KRHWLKVKKDYLNDGAMADTADLVVLGGWFGTGQKGGIVSIFLMGCYDTS
TKKWMTVTKVHGGFDDATLEDLQDKIVPIMKKIKGDYDSVPSWLKCNRGV
VPDFIVNDPKVMPVWEITGAEFSKSDIHTANGISIRFPRVTKQRKDKNWK
TATNLEELIALYKTSKENVDFDIDFEGKNDSINDNNEDIDGMKENSDSSP
PKKIKLESPNKMFSKGRLLDPRERSPVKVTLGKSNRSFDKIEISNKYGLD
MFVKQGDIFKDSPRNASLAHCISLDYSLGKGIAKTFRQKFNCFNQLSKVK
SVIGGLAVLKDGDRYIYNLVTKAKYSDKPTYDNLKKSLEAMRLHAEEKNV
SEIAMPKIGCGLDGLQWNAVRTLIKNVFLKTEITLTIFSLQDESPSILSE
VSISKETIEKRQLTQEVSNNDLAPPSKKLSLEDPFIGTKILLKPGLSENN
DLLTRHIITFGGKIVEDFEEDKATHIVYPNKSVKLKKKFSSKGVCVKEDW
IVDSIKQKRXLNTKKYRL
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mRNA from alignment at LSalAtl2s12:618110..621790+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001767-697614 ID=EMLSAT00000001767-697614|Name=EMLSAT00000001767|organism=Lepeophtheirus salmonis|type=mRNA|length=3681bp|location=Sequence derived from alignment at LSalAtl2s12:618110..621790+ (Lepeophtheirus salmonis)
TTCAAATATAAAAAACGTTTCGCAGACGCTCTAAAGATTCTATTGTCTAT AAAACTAGAATCAAATCAAAGTATCCAAATCATTTATGGTTAAGGAATGA CAGATAACAAATACAGCATAGACTACGCCAAGCGTCCTGCTGGTTGTAAG AAATGTAAGGAGAAGATGCTCAAGGGCGCCTTACGGATTGCAAAAATCAC GGCGAGMCCATTTTCTGACGATGGAGAAATGAAACTGTTTCATCACCCTG CATGTATTTTCCAAACCTTTCAAAGAGTCAGACCCAATACAAAGATTATT GAGGAGCCCGGCGACCTTGAGGGTTGGGAATCAGTGACGGCAGAAGACAA GGAAATGGTATTAACTCTAATTCGAGAGGCAGCCAAGAAWTCAAGTGACA ATAGTATGTTTATACATATTTGATATTTTTAACGAATTGTGCAGCATGCT TAATAATACGTAGCTAATTATGCATATTTATTTCCTAATTATAGAAGCTT CGAAAAAGAAGGCTCCTACCCCAAAGAAAAAAACACCTTCGAAAGAAAAA TCTCCATCATTATTGGAAGGATCTCCTAGTCCTATGAAAGAAGATAATGA ACGTCCAAAAAMGGGCGATCCCGCCTGCAAGGACAATTCTTTTTCAGAAT TCATTCGTTTATGTAACAAAATAGCGGATGAGCCCAGTTATAATGCTAAA ACTGAAATCATGGCCAAATTTTTCCGTCACAATAAATTTGAAGGGGACTT GCACGTCTGGATTAGATTGCTTCTTCCTGGTGTTGTTAAAAGAGTCTATA ATTTACAGAGTAAAACCCTTGTAAAAATTTATTCCAAGATATTTGAAGAG TCTGAGGATGAAATGTTAGAAGACTTGGAGGCTGGGGATGTTGCAGGAAC GATTGCTACTTTTTTTGAAAAGAGTGAGTCCTTTTCTCCACTTAAAAAGT CATCCCTCAATGTTTTTGAGGTGGATAGCTTTTTAAAAGGACTTTGTGGA ATTACAACAGAGGATAAACAAATGTATGAGCTCAAAAAAATTACTAAAAA ATGTACTCTTGAGGATCTTACTTTCATTATACGTTTAATCAAAGGAGATT TGAGAATGCAAGCTGGCTCAAAACCCGTTTTAACTGCTCTTCATCCTGAC GCATATGAAGCCTTCAATAGTTCTCGTAATGTTGATAAAGTCATTGAGAG TGTTTTGACATTGCGTTCTGGTGGAGATCCTAAAGGTACTTTAAATGTTG GAGCAACTCTCATGAACCCTATACAACCCATGTTAGCACAAGCATGCAAA TCAGTGGACATGGCTTTTAAGAAGTTTCCCAAGGGTATGTACTCTGAAAT CAAATATGATGGGGAGAGGGTTCAGCTACACAAACGTGGCAAAGAGTTTG CTTATTTTTCTCGAAGTTTAAAGCCTGTAATGGCACATAAAGTGAAAATA TTCAAGGAGTATATTCCAGAAGCATTTCCTGATGGATCTGATTTGATACT AGATGCTGAGGTACTCATGGTTGATAATAAAACAGGAGATCCTCTACCTT TTGGCTCATTAGGTGTTCATAAAGGCTCAGGATTCAAAGATGCAACGCCT TGTCTTTTTATTTTTGATTGCATCTACTATAACGGAGAAAATCTCATGGA TAAACCCATTCATGATAGAAGAAAGCTTTTATCTCAACACATGGTCGAAG TTGGGAATTATATAAAGTTTTCAGAAATGAAGGTCATTAAGAAAAAGTCC GAGTTGGGAGAAATGATTCAAGATGTTCTTAAGAAAGGTCTGGAAGGATT GGTACTCAAAGATATCAATTCTACTTATGAGCCGGGGAAGCGACATTGGC TTAAGGTCAAAAAAGATTATTTGAATGATGGGGCAATGGCAGATACTGCT GACTTGGTTGTTTTGGGTGGATGGTTTGGTACAGGACAAAAGGGTGGGAT CGTGAGCATATTTTTGATGGGTTGCTACGATACCTCAACCAAAAAATGGA TGACTGTAACAAAGGTTCATGGAGGATTTGATGACGCTACTCTGGAGGAT CTACAAGACAAAATAGTGCCAATAATGAAGAAGATCAAAGGAGACTATGA CTCTGTTCCATCATGGCTGAAATGTAACAGAGGTGTAGTTCCTGACTTTA TTGTCAATGATCCTAAGGTTATGCCTGTTTGGGAGATAACTGGTGCTGAA TTTTCAAAATCGGATATTCATACAGCAAATGGAATATCCATTCGTTTCCC CCGCGTTACAAAGCAAAGGAAGGATAAAAATTGGAAAACGGCAACTAATC TTGAGGAATTGATTGCACTCTATAAAACATCCAAGGAAAATGTTGACTTT GATATCGATTTTGARGGAAAAAATGATTCCATCAACGACAACAATGAAGA TATTGATGGTATGAAGGAAAATAGTGACTCTTCACCTCCTAAAAAGATAA AATTAGAAAGGTAATTATTTAGTTTATTCGCCAAAGCTTAATATGCCAAT TTTTATTCTTCAACGTTTTCAGTTAAGATCAAATTCTGTACGCTTTTTGT AGATGCAGAAAAAAAAATATTTATACGAAGACTTGGAGGAATCGAATATT GTAATCTTATATCGACTATTTTTTTATTCTAGTCCAAATAAAATGTTCTC AAAGGGCCGTCTTTTGGATCCTCGTGAGCGATCGCCAGTTAAAGTTACCT TAGGCAAAAGTAACCGCAGTTTTGATAAAATTGAGATTTCAAATAAATAT GGACTTGATATGTTTGTGAAACAGGGAGATATTTTTAAAGATTCGCCAAG AAATGCATCTCTTGCTCACTGCATAAGCTTAGATTACTCCTTGGGTAAAG GGATAGCCAAGACTTTCCGTCAAAAATTTAATTGTTTCAATCAACTCTCA AAAGTCAAATCCGTTATCGGTGGTCTGGCCGTGTTAAAAGATGGCGATCG TTACATCTATAATCTAGTGACTAAGGCCAAATATTCTGACAAACCCACAT ACGATAATTTAAAAAAAAGTTTAGAAGCAATGCGCTTACATGCAGAAGAA AAAAATGTCTCCGAAATTGCTATGCCCAAAATTGGTTGTGGATTAGATGG TCTTCAATGGAATGCTGTTCGAACCCTTATCAAAAATGTATTTTTAAAAA CTGAAATTACTTTAACTATATTTAGTCTCCAAGATGAGAGCCCCTCTATC CTTTCGGAGGTATCTATTAGTAAGGAGACGATTGAAAAAAGACAATTAAC TCAAGAAGTGTCGAACAACGATCTCGCGCCACCATCAAAGAAGTTATCCT TAGAGGATCCGTTCATTGGTACAAAAATTCTTTTGAAGCCAGGACTGTCT GAAAATAATGACTTATTAACTCGACATATCATCACCTTTGGAGGTAAAAT TGTGGAAGATTTCGAAGAGGACAAAGCGACTCATATAGTGTATCCAAATA AGTCTGTAAAGTTGAAGAAAAAATTTTCTAGTAAAGGAGTGTGCGTTAAG GAAGATTGGATAGTGGACTCGATTAAACAAAAAAGAGMTCTTAATACCAA GAAATATCGTCTTTAAAAGTATGACATGATCATTGCCTCAAATATTTGTT CTCATTTTAAAGTACCATATGTTACATTTTATATAATTATTTGCTTTTCA TTCAGAATTTATAAATTTAATGAACCTATCA
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