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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s12 | supercontig | LSalAtl2s12:1728453..1734753 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001771 >EMLSAP00000001771 ID=EMLSAP00000001771|Name=EMLSAP00000001771|organism=Lepeophtheirus salmonis|type=polypeptide|length=259bp
MEIVESDRHVSTVLIAKEMNKGVLRMNECPNGHAHIADSMNCHDFFHCTT
VEHAGYALMVKKSCGTFLMFDPFLQNCDWPFRVRRIRPECINEASGERKP
YLTRIYTWHPKGKNPLKDINNQFITKKYSESKRQELLSSTTQRFNRANDP
RNXXXSPLPXTVVSTTVSIVYTTLPAYAQIKEARSPDPISQKPLTLSKVI
PMGKFSLNSLRIFTPQNVTKXRXASPKQLSTQNWTLSNKNPRKYRPLSSN
LIKLKIFKG back to topmRNA from alignment at LSalAtl2s12:1728453..1734753- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001771-697618 ID=EMLSAT00000001771-697618|Name=EMLSAT00000001771|organism=Lepeophtheirus salmonis|type=mRNA|length=6301bp|location=Sequence derived from alignment at LSalAtl2s12:1728453..1734753- (Lepeophtheirus salmonis)
ATGGAAATCGTCGAGTCCGACCGTCATGTAAGCACTGTTTTGATTGCCAA
GGAGATGAACAGTAATGGAAATCGGCCATAAAAATGTCCATTAAAGATAA
TGGATTTCTTTCTAATACACCTTATATTTTAACAAGAAAGAATATTTTTT
AAACTAGTCTTACTCATATATTCTCATTTTGTATCATTGCCACAAATAAT
CCATGGGTTGAATTTTTTCTCACCCGATCCGACCGGCAATAAATCCTTAA
ATAAAAGTGATGAAACAACTATTTTACGTGGAGCTGGAGGTTGAATAATT
GAGAAATACACAACTCGCCCCGTGGTCTAAAAGTCAACGCGGATGTTTAT
ATACATAGTAGTTATAATAATTGAATGAAACTTATATAATTAAATACATA
ATTTTCCGAACCTGTAAAACTCTGACAAATCACGGGAAAGAAAACCTACT
AACCGTTTAAATAATTATAAATAAAATGCTTTATCAGCATCATCAACCCA
TTTTCTATAGGCAAATTGTCTTATGTGGGATATAGGTCATTTTTATTCTT
ATCCACTTCTTGCTGTTGATGATACAACACAGTAATGGACGACATAATAC
CCAAAGTACAGTAAGGTGACTCAAATTAATAGGGAAAATTCCCTATGTAA
CCAAAAATCCTCACTTATCAAAGATATGATAAGTTATATGGGTCATCTTT
TAGAAGGCACATAAAATAAGTGTTAGTTTTCCATGAGGTGCAGCATTTTG
TTACTACAATATTAATCCCTCTGTCCAAGAAAATGAAAGTTGACAAAGAA
TATATATGTATTGTAAATTAAAGTACAATCCATGATTACATAACATAATA
AAAGTATCCTTTAAAATTCATTCTTATGGACTTAAATACTTCTCAATGCT
AAGTAAATAAGTAGTTTGATAGTGGGTTTAAATCTTCTTACCGTTAAGAG
TATATTGAGCTTCTTATCATTTCATCATACTTTTAATCCTCTAAAAAGAA
GGTTTCTATTGTACTATTATAACTAATAAGTTGTCATTAACATACTTACT
TATGTATGTAAATACCCAGGCTATTATAAGTAGTACGTAATAAAAAAGTA
TGCCATTTAATTAAGAGAAATTTGTTAAAGTATGGATTAGTCTATCTACA
TATTTTGGATTAATTCCGTCCTCTCCCTTAAATGTACATACCTACAAGTA
GTGTTGGAGATCTACACTTGACCCGATTATTGGCCCGAATTATAACTAGA
TTCATATGGAATGTCTTCTAATCAGATAAAAATTCAACAAAATTTCCAAT
ATACTCTATAAAATTCAATTCGGGCCGACGCGTTCGACCTTCTCTAAGAA
GTGCAAGGGCTTGACCCGCTAGCTTTCATAGAATTGAACACAGTGCTGGG
ACACACGGACTTCTCCTTGACAAATTCAGCCCTGTACCACAACTGGTATT
TAGTTACATATTTAGTGATTATTTAAACATACTTAAATTAAAAAAAGGGA
GCAAATGTCCAGATCATTGTTGATTTTATAATTAGATGGGTTTAGTATGT
TGAAATCAATAAAATCATTTGATTTTATTATTTGTAATGATAAAATTTTG
ATTGGTAATAGATTTTTTTTAAATCAATCACTCTGAAACACTCGCAATTT
GTCACACAAAAACCAAACGTGAAAAAGAATGGAGGGTCACCCTAATTTAA
CGGCCATACTTTTTTCATAATACAAAATACTCACTTGTTTATCTGTTTAC
CAAATGCGTTATGAATTGATCTATTTGAATAAATATATGTATGTAGAGGA
ATGCATAAGAATTAAAATTCCTTTAAGACGCTAAATGCTTAAAGAAGATA
TTTTCCAACTTACAATTGTAAATTTTATAAACAAACATAAACTCCTATAG
AAAAAAAAAATACTCTTTCAAAGAATTACATTCTAATTAACCATTACTCA
CTGTCAGAAGACAAACAATATAATCCATTTTCGTAATCTTTTGAACAATT
ATCAAAAGATTAAAGGTTCTTCCAAGCAGAAAGGGGACATAATAAATATG
TAAGTTAGGTAAAAGTAGTAGACGTGGGGTTGATAGAGTGGGAAAAGTTG
AAGATTTTTTCTTTTATTTACATAAACATGCAATCAAGGTCATTCATATC
CTTTATTTTTTATTGTCATTCCTATATGTGACAAATCAAGAATGAATACT
CAATACTGAAGGAGAGTGTTAGGATCAAATCCTCACATTTTTCAAAAATA
TGTAAATGTCACTGAGGCCAAATTTTTGGGGAGATTTACGGTTTGAATTG
TACATATGAATGTTGAAAAGGGCTCATTTGCAATCCAAGGTCTGAATTTT
GTTGCATAGTATTACTCTCTGTTTTTCATGAGCATACAAACTTAGACGTT
CTCTCCTCAAGAATGAAAGAATAATCATCTTACCTCAGGGAATTAGAACT
TTTCAAGTGATCAATTAATTTAAAAAATAGTTTTCAATCCATACAATGGT
ATTTTATGAGTTAATACAATTTCCTCTTTCATGAAATAACCATTATGAAT
ACTCTACGAAAAGACCTTCAGTTGGTCAATAAAAAAAGGACAGGGGAAAA
AGTGTGCTTTTTCCATAATATATAGAGTACATGATATATATTTCTTGGAC
AAATAGAGTCAAAAAACAATTAGAGACACGGGGGAAAGTTCCTTATTTTA
TTCAATATCATTTAATAAAATCAATAAGTAATACATGTATAATATTTGAA
GCCGAGGAGGTACGTACGTACAATGTACATGACATAGGTATAATTATCCC
TTAAATACAAATAAATTAGAGCAACAACGAAAATACATATGTAGTTTTAC
TTGTCTGCTTAGCTACCTATAACATATGTTTCATTTTATGTAAATAAGTT
ATCAACGGTATATGTTTTCCTTTTTCAGAGGGAGTTTTGAGAATGAATGA
ATGTCCAAATGGTCATGCACATATTGCAGATAGCATGAATTGTCATGATT
TCTTTCATTGTACAACTGTAGAGCATGCGGGATATGCACTCATGGTCAAG
AAATCATGCGGAACCTTTCTCATGTTCGATCCCTTTCTTCAGGTATGTAT
GAGCTCAATTCTAAAAGGAGTTAGTTACAAGGGCGTATTTTGCTTGTCAG
ACCCAGAGGTCGGAGATAAATAATTAAGAATTACTAATTTATATAATACA
AATGCAGTTTTCTATATTGTTAAGAGACTTTGGAACCTCAAACTCCCATA
CCCAAAATCCTTAAAGCACTAAAAACATGAATAAATATTGAAATTGCAAC
AACACCTTTATTGAGCTTTTAATTTTTTGAAGTCGTGGATTTAAAAATAA
ACATATCAGAGGCATCTGGAGGCGTATATTTTTTTAGAGGGGGCTTGGTT
GTATGAATTTATTTGAAAATAAATACAAAAATTAAAATAAAATAAAAATT
CTTTTTGAAAAAACTTTTAAAAATTAAAATTTTTGAAAAAAAGTTAAAAA
TAATTATTTTTTTCGTATTTTTAAAAAAAAAATCCACAGCTACTAAAAAA
AATTTCAAAATTTAAATTTTCAATATTACATTTTTTGAAAAAAATTTTAA
AATATTAAATTTTTTTAGAAAAATTTCTATAATCTATAGTTGTTCTCAAA
AATCCATAGTGATTCCCCAAGAAATTAAATTTTTTCCCAAAAAAAATATT
TCAAAAATTTAAAAATATTTATTTTTCAAGAAACTTTTAAAAATTAAATT
AAATTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTATTAAATTTTTGGAAAATAAACT
TAAAAATTAAATTTCAATTATATAATTTTTTGAAAAAAATTAAAACTATT
AAATTTTTTGGTTTGTTTTTAAATAAATCTATCGATATTCACTGAGAATT
AAATTTTTGCAAAAAAAAATTGAAAAGTTAAATTAAATTTTAAATATTAA
ATTTTCTAGTAAAAACAAATAGTCCTTTATTTTTTTCACAACCCCTCAAG
CCCACCAACACCAGATGCCCCCACATATGTAGTAAGTTAACAACAGTCTT
GAACAGATATATATATATACAAAAAGAGAAACAAACTTTATTTCCTAGAC
ATATTTTGGTCAATTATAGACTATGTATATAAATCTCTTGGACGAGTTGA
AATATTCAAGGATGTTAAATATATGTAGCTTAGAGTCTTAAATTGATTAG
GAGATACGGCCTTTCAAATAAAATATCCCAACTTCTTTCATTGTGCCATT
GAATTTTTGTCTACTCCATGTCAAATTTGGAGCACCTCAGAATGATTTAT
TGATAGAAATTGACGATCCTTTGTTGTCAAAGAATACAAATGCAATCCTC
ATTCAATTTTGAGAATAATCATTTTAGCTTAGTCTTGTGTTGATTGGCCA
CCTATATCCGTATCAGCCAAAAAACAACAACTAGAACCTCACTTAGATAT
TTCATCACTGTTTTTATGTTTTTCTAGAAAATAAACCAAACTGGATTGGA
CTTTAAACTGTCTACTCGAACAAAATAATTCAAAATAGAAGTAAAATGCC
TTACTTTACTTTGACAAATTTAAAAAAGGCTTGATTTAGAACCATATACA
CATGGTGTGACAACTTAACTTCCTTTTTCTAAAAGGCAATTAAACAAGTT
TTATAAATCGGTGAATTTTTGCTTTTTGTTTCATAATAATAGTACACATT
TAAAATTTTGTTCAACATAGGTTTACAAATCATATCAGACAGGTGATGTG
CGCTATTACTCATACAATACTCATTTCTCTTTAAATAACTTTTTATTGAG
AGGCATTTAGAAGGACAATAATTTTCTACAAAAGAATGGAAAATTTAATT
GGCAATATATCTTATTTTATAGTTGTGTTTGATAAATTATTTTTTTTTAA
ATAAGTAATTGACAATTCCGAAGAGTTATAATTTTTTTCTATTTCTCCAG
TTCTAATTACCCAATTTTGACCAACAAACCCAATTTAAAAAAAATGCACA
TCACCAAATATGGCAGSATCATTATAACTCTCTAGTCTAGTGAGGAATAT
GCGTTTACCGTCGGAAACAGCATATTCCTCACTACTCCAACGCATGATAG
CGATTGACTGTATTCTCAAGAAAATTTTATAATCTTGCCTCTAMAAATGT
AACCACGCCCMCYCCGCCATTACTTTTACAGCCTGATTGTCACGTATTAT
AAAAAGGACGTTATGTTGCCGCACTCTGGATATTTAGAACCGATGACAGC
ATTGTAATATGGCTAGAAATCTGATCAATAAAAATCAACCTACATTCAAA
TTATTCAGCTTTTTTTTACACTCAAGACTTAGGAGAAATAATTTTATATA
CCAAACCCCTAGCTAAAAYCCTGCCTATAAAAGGTATTCTCTCAATCCCT
CCGCTAATTACTAACACCTCAGTGGCTATCTTCTATTTAATTAAATAAAA
TAAAACTATGTTTAAACATGTATATAATGTGCGAATTGTATTTTAGAATT
GTGATTGGCCTTTTCGAGTACGTCGTATTCGACCAGAATGTATAAATGAA
GCCAGTGGAGAGAGAAAACCGTATCTCACCCGAATCTACACATGGCATCC
CAAAGGCAAAAATCCATTAAAGGATATAAACAACCAATTCATCACCAAAA
AATACTCTGAGAGTAAAAGGCAAGAACTATTGAGCTCTACAACTCAGCGG
TTCAACAGAGCAAACGATCCAAGAAACMCCMCGYCCTCMCCCCTTCCAYC
AACCGTTGTGTCAACTACAGTCTCCATTGTATATACAACCCTTCCTGCAT
ATGCACAAATCAAAGAAGCAAGATCGCCTGATCCAATTTCCCAGAAGCCC
CTTACACTTTCTAAAGTGATACCCATGGGGAAATTCAGTTTGAACTCTCT
ACGAATCTTTACTCCTCAAAACGTAACAAAGTKGAGARAAGCCAGTCCAA
AACAACTGTCAACTCAAAATTGGACATTATCTAACAAAAATCCTAGGAAA
TATCGGCCATTATCTTCTAATTTGATCAAATTGAAAATATTTAAAGGATA
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