EMLSAT00000001806, EMLSAT00000001806-697653 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001806
Unique NameEMLSAT00000001806-697653
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s130supercontigLSalAtl2s130:11951..14764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001806 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001806EMLSAG00000001806-684572Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007979EMLSAE00000007979-716907Lepeophtheirus salmonisexon
EMLSAE00000007980EMLSAE00000007980-716908Lepeophtheirus salmonisexon
EMLSAE00000007981EMLSAE00000007981-716909Lepeophtheirus salmonisexon
EMLSAE00000007982EMLSAE00000007982-716910Lepeophtheirus salmonisexon
EMLSAE00000007983EMLSAE00000007983-716911Lepeophtheirus salmonisexon
EMLSAE00000007984EMLSAE00000007984-716912Lepeophtheirus salmonisexon
EMLSAE00000007985EMLSAE00000007985-716913Lepeophtheirus salmonisexon
EMLSAE00000007986EMLSAE00000007986-716914Lepeophtheirus salmonisexon
EMLSAE00000007987EMLSAE00000007987-716915Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768983auto768983Lepeophtheirus salmonispolypeptide
EMLSAP00000001806EMLSAP00000001806Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001806

>EMLSAP00000001806 ID=EMLSAP00000001806|Name=EMLSAP00000001806|organism=Lepeophtheirus salmonis|type=polypeptide|length=603bp
MNRRRSDAFLSNSGMEDLWDDIDDAVLLRMSQMAEKKVRGNESESQADFL
SVLSESEEDLNCFTADENRFNQMQTQFPETAKNVFKRPLSPPSDVSKKRK
KDEESISIDKILEDNRKLKSSNQKLNEEIYTKRGEVALLRADIRKKESCI
EIERSERQKILATKNEELSKFKEQCSKANDAVKTDNEFLTHQLTQTEEKL
RKMEMLMTTNGSQTPGRKVPERRSIGFPEHDISTIIPDPKRVSPRKKTRA
LKDASCQVELKKLNSFELKVKGRKENLTSAKLVSLIGSDMGLDILSSHSP
LVQCLYSTERTNDACLATVEDMISSIKNDVDVNLMLKKLKASKLILDASN
IFAKYLSQKSVIQLSELLSTKDAQKETLLSLFSLGEVLVRKHLVKHEDFR
TFVTRLQDLFKSITSIELTSSLLNFLSGSAFYPDIAKLYCQMSTNSCFIF
ELCSLVTRASSFHGNVASLMKNFLKFLFIHMSSPEDLSWIGSLPSNEICN
LCRMDILKTVASLTVKILQKVQSLIAADALSEDFIFCLKKSIHCLHKLWS
TDPNFVQNLSDSPGSQREYIWATKKLSKMETLLQLSQEEASMLADLNIQY
DQR
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mRNA from alignment at LSalAtl2s130:11951..14764+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001806-697653 ID=EMLSAT00000001806-697653|Name=EMLSAT00000001806|organism=Lepeophtheirus salmonis|type=mRNA|length=2814bp|location=Sequence derived from alignment at LSalAtl2s130:11951..14764+ (Lepeophtheirus salmonis)
CAAAACACGATCTTCATTTCGATTATTAGAAGTATTCCATAAGCTTACAA
ATTAATGAATCGCCGTCGTTCGGACGCCTTTCTCTCCAACAGTGGAATGG
AAGACCTCTGGGATGACATTGACGACGCTGTCCTTTTACGAATGAGTCAA
ATGGCTGAGAAGAAAGTGAGAGGAGTAAGACCGGAGTGCAGACTATAGTC
TCATACTCAGTACAATACTTTACTTTATTTATTGGTCATACAAAATATTC
AATATTAATATTGGTAATGTTTTTTCTATTACCTACAGAATGAATCAGAG
AGTCAAGCAGATTTCCTTTCAGTTCTGAGTGAATCTGAAGAGGATTTGAA
TTNNNNNNNNNNNNNNNNNNNNNNNNCAAATGGCTGAGAAGAAAGTGAGA
GGAGTAAGACCGGAGNGCAGACTATAGTCTCATACTCAGTACAATACTTT
ACTTTATTTATTGGTCATACAAAATATTCAATATTAATATTGGTAATGTT
TTTTCTATTACCTACAGAATGAATCAGAGAGTCAAGCAGATTTCCTTTCA
GTTCTGAGTGAATCTGAAGAGGATTTGAATTGCTTCACTGCTGATGAAAA
TCGATTTAATCAAATGCAAACACAGTTTCCAGAGACTGCAAAAAACGTTT
TTAAAAGACCCCTCTCACCTCCCTCTGATGTCTCAAAGTATGTCGCATTT
TCCTGATCAATCCTATATTTTTACGTCAAATCCATTAAATAATATACCTA
AATGTTTTATTTTAGAAAAAGAAAAAAAGATGAGGAGTCAATTTCCATTG
ATAAGATCCTTGAAGATAATCGAAAGCTCAAATCAAGTAATCAAAAACTC
AATGAGGAAATATACACAAAAAGGGTAATACAAAGTTATCATTATCATTT
CTTTGTCATATTATCAAAGCTTGGTTCCTTAGGGGGAAGTTGCTCTTCTG
CGGGCGGATATTCGTAAAAAAGAATCTTGTATCGAAATAGAGCGAAGTGA
AAGACAAAAAATTCTTGCAACTAAAAATGAGGAATTGTCCAAGTTTAAAG
AGCAATGCTCCAAAGCCAATGACGCTGTTAAGACTGACAATGAATTCCTT
ACCCATCAATTAACGCAAACAGAAGAAAAACTTCGAAAAATGGAAATGTT
GATGACAACAAATGGATCGCAAACTCCAGGGAGGAAAGTCCCTGAAAGAA
GGTCCATTGGCTTTCCTGAGCACGATATGTATGTCGGTTTTGTGTATTGT
TTTCAATATTCTCCAAAATATTTATCATTTTTAAATAGCTCTACGATAAT
ACCTGATCCGAAACGAGTAAGTCCTCGTAAAAAAACTAGAGCTCTCAAGG
ACGCCTCGTGTCAAGTTGAGTTGAAGAAGTTGAACTCCTTTGAATTAAAA
GTTAAAGGAAGAAAGGGTAAATGCTAAATTAATTTTGACGTTAACGATTT
ATTTTGTTATGCATACTTATTTTAGAGAATTTAACTTCTGCAAAATTAGT
GTCTCTCATTGGCTCAGACATGGGTTTGGATATACTGAGTTCTCATTCAC
CATTAGTTCAATGCCTTTATTCTACAGAAAGAACAAACGATGCTTGTCTA
GCAACTGTGGAAGACATGATTAGCTCAATTAAGAACGATGTTGATGTGAA
TCTAATGTTGAAAAAGCTAAAAGCTTCTAAATTAATTTTAGATGCTTCCA
ACATTTTTGCAAAATACCTATCTCAAAAAAGTGTTATTCAGTTGTCAGAG
TTATTGTCTACCAAAGACGTAAGTATGACAATTTATTTCCCTCATTTAGG
AATAACAAATCTATATCAACTCCTAGGCTCAAAAGGAAACACTATTATCC
TTGTTTTCCCTTGGAGAAGTCCTTGTGAGAAAACATTTAGTGAAACATGA
AGACTTTCGCACTTTCGTAACCCGTCTTCAAGATCTATTCAAATCAATTA
CCTCTATTGAATTAACTTCGTCTCTTTTGAACTTTTTGTCTGGCTCTGCA
TTCTACCCAGATATTGCAAAACTCTATTGTCAAATGTCTACCAGTAAGAG
GCAACACATTTTTTGTTTTATTATTGTGAATAATTTGATTCTTCACTTTC
TAGATTCCTGTTTCATATTTGAGCTATGTTCTCTTGTGACTCGTGCCTCC
TCATTCCATGGCAACGTGGCCTCCCTCATGAAAAACTTTTTAAAGTTTTT
ATTTATTCACATGTCATCACCTGAAGATTTGAGTTGGATTGGTAGTTTAC
CATCTAACGAAATTTGCAATCTATGTCGGATGGATATCCTGAAGACGGTG
GCTTCTCTTACGGTCAAAATACTTCAAAAAGTTCAAAGCCTAATAGCTGC
AGGTATTTTGATTTTTATCTCCCTCATTGTTATTGATCATCATTTGTACA
TCTTATTATTTACTAATTGTAGATGCGCTATCCGAAGATTTCATTTTCTG
TCTTAAAAAGTCGATTCATTGTCTTCATAAGCTATGGAGTACAGATCCTA
ACTTTGTTCAAAATTTATCTGATAGTCCTGGATCTCAAAGAGAATATATA
TGGGCAACAAAAAAGCTATCCAAGATGGAAACACTACTTCAACTTAGTCA
GGAAGAGGCATCCATGCTCGCAGATTTAAATATACAGTACGATCAACGCT
AAAATTTCATTCTTTTTTTCTCTCTATTATAATGTTTTTTATAGACTGGG
ATTTAATATTTCTAATCAAGTAATTATTTGTTTAGTTTGCTGAGTCTTTT
ATATTATTATAATATGTATTGCTTCAGTATTCGCTTTGTATGACTATGAT
AATTAGTATTATGT
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