EMLSAT00000001837, EMLSAT00000001837-697684 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001837
Unique NameEMLSAT00000001837-697684
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1318supercontigLSalAtl2s1318:72145..72812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001837 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001837EMLSAG00000001837-684603Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008090EMLSAE00000008090-717018Lepeophtheirus salmonisexon
EMLSAE00000008091EMLSAE00000008091-717019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771361auto771361Lepeophtheirus salmonispolypeptide
EMLSAP00000001837EMLSAP00000001837Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001837

>EMLSAP00000001837 ID=EMLSAP00000001837|Name=EMLSAP00000001837|organism=Lepeophtheirus salmonis|type=polypeptide|length=135bp
MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDS
RGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP
AENSPECRFSTRPSVPFASSPASSVANSGVADDVF
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mRNA from alignment at LSalAtl2s1318:72145..72812+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001837-697684 ID=EMLSAT00000001837-697684|Name=EMLSAT00000001837|organism=Lepeophtheirus salmonis|type=mRNA|length=668bp|location=Sequence derived from alignment at LSalAtl2s1318:72145..72812+ (Lepeophtheirus salmonis)
AAATCAGTTCATTCCATTCTACTAGAAACTACTAATTAAAAATGTATCTT
GGAGTCACATTTATTCTCTTGAGTGCAGTCCTTGTGGGATTTTCTCATTC
ACAAGATGRCCAACAAGCKCCAGCAGCGGCTCCAGCCCCTGGAGGAGAAG
ACTGTAATTGTCAATGTATGTCTTTAAAATTCCGAGATTCGAGAGGAACC
ACATACGGAAACTGCGAGAGGTAAGTCAACGTATGGAAATATACCATCAT
TTTACTTCCTACTTTGCAGCACGATCAATGGAGCTCAGTGGTGCTATGTT
AAATATGATAGATTTAGCCCATGTCCTGATCTTCAATCATCCCGTCGTTT
CAACGGACGCTATTGGTCTAATCATGCCTGTGCAACTCCAGCTGAGAATT
CGCCTGAGTGCAGATTTTCTACTAGACCATCTGTTCCATTTGCWTCTTCR
CCAGCCTCTTCCGTTGCAAACAGTGGTGTCGCCGATGATGTCTTTTAATC
CTCTTTATCAGTTGTTTTCCTGTTTTAATGTAAAATATAGGATTAATTAA
TGTTTTTTTTTGTTTTTTAAAGTATAATATATTTCTCCAAAAATAAAATA
AAATGTTCTAAATTCAATTGCAGTTAAAAATGGTTAATCGATAATAAAAA
CTATTTCATTTTAGTCCC
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