EMLSAG00000001837, EMLSAG00000001837-684603 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence) HSP 1 Score: 75.0998 bits (183), Expect = 7.199e-17 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0 Query: 1 MYLGVTFILLSAVLVGFSHSQDXQQXXXXXXXXGGE--DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECR 108 ++L ++F L A+ + F + + + +C CQC SL FRD G +GNC+S + GAQWCY+ +S C DLQ S +F WS ACATP +S EC+ Sbjct: 35 VFLKISFFSL-AIGINFDPAGEDARNATLLTRAASTYVNCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYECQ 364
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 8.407e-14 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence) HSP 1 Score: 67.3958 bits (163), Expect = 9.233e-14 Identity = 37/72 (51.39%), Postives = 41/72 (56.94%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTI-NGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107 +C CQC SL FRD+ GT GNC++ GAQWCYV S C DL S RF WS ACATP S C Sbjct: 130 NCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALC 342
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 1.023e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932370|gb|GAXK01026183.1| (TSA: Calanus finmarchicus comp18158_c2_seq8 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 3.598e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932375|gb|GAXK01026178.1| (TSA: Calanus finmarchicus comp18158_c2_seq3 transcribed RNA sequence) HSP 1 Score: 67.3958 bits (163), Expect = 4.075e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932373|gb|GAXK01026180.1| (TSA: Calanus finmarchicus comp18158_c2_seq5 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 4.301e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932371|gb|GAXK01026182.1| (TSA: Calanus finmarchicus comp18158_c2_seq7 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 4.385e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932374|gb|GAXK01026179.1| (TSA: Calanus finmarchicus comp18158_c2_seq4 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 4.567e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932372|gb|GAXK01026181.1| (TSA: Calanus finmarchicus comp18158_c2_seq6 transcribed RNA sequence) HSP 1 Score: 66.6254 bits (161), Expect = 6.219e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101 +C CQC +L FRD G T+GNC+S+ + GA WCYV + S C DL +S RF G+ WS ACATPA Sbjct: 4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12") HSP 1 Score: 278.1 bits (710), Expect = 4.541e-97 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 Query: 1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF 135 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF Sbjct: 1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDVF 135
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14") HSP 1 Score: 177.948 bits (450), Expect = 1.278e-57 Identity = 98/136 (72.06%), Postives = 110/136 (80.88%), Query Frame = 0 Query: 1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPF-ASSPASSVANSGVADDVF 135 M LG+ F++LS VLVGFSHSQ+ Q+A AAAPAPGG+DCNCQC+SL+FRDSRG TYGNC ST NGAQWCYVKYD FSPCPDL+ S+RF GRYWSNHA ATPAENSP R P +P A PASSV + VADDVF Sbjct: 1 MSLGIKFLILSXVLVGFSHSQNIQEAAAAAPAPGGDDCNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGFSPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSVFPPFIPLXAXXPASSVPSKNVADDVF 136
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4") HSP 1 Score: 168.318 bits (425), Expect = 6.872e-54 Identity = 83/134 (61.94%), Postives = 108/134 (80.60%), Query Frame = 0 Query: 1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDV 134 M LG+ F+L A L+ F+H+Q+ Q+A AAAPAPGG DCNCQC+SL+FRDS+G +GNC+ST+NGAQWCYVKYD++SPCPDL S+RF+GRYWSNHACATP+E+SP C++ P V ++ ASS ++ VAD V Sbjct: 1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVR-ETAFASSASSKNVADGV 133
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15") HSP 1 Score: 166.392 bits (420), Expect = 8.489e-53 Identity = 94/136 (69.12%), Postives = 109/136 (80.15%), Query Frame = 0 Query: 1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPF-ASSPASSVANSGVADDVF 135 M LG+ F+LLS VLVGF H+Q+ +QA AAAP PGG+DCNCQ +SL FRDSRGT +GNC+S INGAQWCYVKYDRFSPCPDL++S+RF GRYWSNHACATP ENSP C P +PF ASS ASS + V+DDV Sbjct: 21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45") HSP 1 Score: 96.6709 bits (239), Expect = 4.851e-26 Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 0 Query: 4 GVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107 G+ ++ A V +S++Q AP + A DC CQC++L F D G GNC ST NGAQWCYV+ D S CP L+ S R+ G+Y+SNHAC T SPEC Sbjct: 3 GIYIGIVLATCVYWSNAQQFAPAPINSQA----DCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSPEC 102
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13") HSP 1 Score: 91.2781 bits (225), Expect = 8.351e-24 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 0 Query: 36 EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRP 113 +C CQC+ L++ D +G +GNC ST +GA WCYVKY + SPC DL S F RYWS HAC TP E+S C+ + P Sbjct: 53 RNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYVKYQKSSPCGDLVKSDIFQDRYWSYHACTTPVEDSSICKDTVIP 130
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7") HSP 1 Score: 80.8777 bits (198), Expect = 6.945e-20 Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 0 Query: 7 FILLSAVLVGFSHSQDXQQAPAAAPAPGG---EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATP 100 +L S +L+G S+ Q A AP DC CQC SL FRD GNC +T GAQWCY+ + R CPD Q SRR G+ WS +CATP Sbjct: 5 IVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATP 103
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67") HSP 1 Score: 77.411 bits (189), Expect = 8.047e-19 Identity = 39/76 (51.32%), Postives = 45/76 (59.21%), Query Frame = 0 Query: 28 AAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATPA 101 AAAPA DC CQC SL FRD GNC +T NG QWCY+ + R CPD S RF G+ WS +CATP+ Sbjct: 11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4") HSP 1 Score: 60.077 bits (144), Expect = 2.162e-12 Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0 Query: 8 ILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100 ILLSA++ + +AP+ A +C CQC S FRD G T GNC ST +GA+WC+V+ P + F GR SN ACATP Sbjct: 6 ILLSALVAYVTSQGITLKAPSLAI-----NCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVR-----PGNTCTDTSFFRGRTISNEACATP 89
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14") HSP 1 Score: 59.6918 bits (143), Expect = 3.400e-12 Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0 Query: 9 LLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATP 100 L+ +V+V + +QD +AP+ A +C CQC + FRD RG T GNC S GA+WCYV DR C D + S R + R S ACATP Sbjct: 6 LIISVVVALTSAQDITLKAPSLAV-----NCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRNDQFGRRRQISYEACATP 96
BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 101.293 bits (251), Expect = 5.441e-25 Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 4 GVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107 G+ ++ A V +S++Q AP + A DC CQC++L F D G GNC ST NGAQWCYV+ D +S CPDL+ S R+ G+Y+SNHAC T SPEC Sbjct: 3 GIYIGIVLATCVYWSNAQQFAPAPINSQA----DCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102
BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 57.7658 bits (138), Expect = 6.913e-8 Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 5 VTFILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDL-QSSRRFN-GRY--WSNHACATP 100 ++ IL+ ++ V F +QD +AP+ A +C CQC + FRD G T GNC S GA++CYV+ + C D +S RR N GR+ SN ACATP Sbjct: 2 ISKILIVSIFVAFGSAQDITLKAPSLAV-----NCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPG--NTCQDTRRSGRRDNFGRFRQISNEACATP 96
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 60.077 bits (144), Expect = 3.155e-12 Identity = 38/106 (35.85%), Postives = 51/106 (48.11%), Query Frame = 0 Query: 9 LLSAVLVGFSHSQDXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSR-RFNG----RYWSNHACATPAENSPEC 107 LL+ V + +Q + AP +C CQC +RD+ G GNC S A WCY+ F+ C D++ SR R + R WS AC+TPA SP C Sbjct: 18 LLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 56.225 bits (134), Expect = 1.565e-10 Identity = 36/96 (37.50%), Postives = 46/96 (47.92%), Query Frame = 0 Query: 6 TFILLSAVLVGFSHSQDXQQAPAAAPAPGGED-CNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100 T L V+VG + A A + +D C+CQC + F+ T +GNC GA WCYVK S C D S R +G +WS AC TP Sbjct: 216 TLAFLGEVVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2") HSP 1 Score: 53.9138 bits (128), Expect = 5.915e-10 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 0 Query: 6 TFILLSAVLVGFSHSQ---------DXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNC-ESTINGAQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPECR 108 F +LS VL + +Q D + AP + CNCQC + ++ +GNC + A+WCYV D++S C D+Q S+ N R WS AC+TP S +CR Sbjct: 3 VFCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCR 120
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---") HSP 1 Score: 46.9802 bits (110), Expect = 1.727e-7 Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0 Query: 38 CNCQCMSLKFRDSRGTTYGNCESTING-AQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPEC 107 CNCQC + ++ +GNC + + +WCY+ D+++ C D+Q S+ N R WS AC+TP SP+C Sbjct: 47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001837 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 19
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BLAST of EMLSAG00000001837 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001837 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001837 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 4
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1318:72145..72812+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001837-684603 ID=EMLSAG00000001837-684603|Name=EMLSAG00000001837|organism=Lepeophtheirus salmonis|type=gene|length=668bp|location=Sequence derived from alignment at LSalAtl2s1318:72145..72812+ (Lepeophtheirus salmonis)back to top Add to Basket
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