EMLSAT00000001846, EMLSAT00000001846-697693 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001846
Unique NameEMLSAT00000001846-697693
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s131supercontigLSalAtl2s131:305784..306913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001846 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001846EMLSAG00000001846-684612Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008125EMLSAE00000008125-717053Lepeophtheirus salmonisexon
EMLSAE00000008126EMLSAE00000008126-717054Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776138auto776138Lepeophtheirus salmonispolypeptide
EMLSAP00000001846EMLSAP00000001846Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001846

>EMLSAP00000001846 ID=EMLSAP00000001846|Name=EMLSAP00000001846|organism=Lepeophtheirus salmonis|type=polypeptide|length=232bp
MKWDVGDEGRFIDSSEESISDLDFLSVISDFEKHQDEEAFLKDSLDPFYQ
TPHPPPHWSYSPYSQGTLDYWDNSGEGIDHRLSYHGMYHGSFDGYNEKEX
XSDRPXSSPETIVKSKKRRKNKSPVEDALKIIKKESQHNLELPKKLFYKH
NNSDNPFPKKRGPRPKVLTKEEKKKKRVDANDRERQRMNQLNTAFNNLRD
VLPRHGNDRELSKFETIQIAKNYIQTLHQLVT
back to top

mRNA from alignment at LSalAtl2s131:305784..306913+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001846-697693 ID=EMLSAT00000001846-697693|Name=EMLSAT00000001846|organism=Lepeophtheirus salmonis|type=mRNA|length=1130bp|location=Sequence derived from alignment at LSalAtl2s131:305784..306913+ (Lepeophtheirus salmonis)
ATGAAGTGGGACGTGGGGGATGAAGGAAGATTCATAGACAGCTCCGAAGA
GAGCATCTCTGATCTAGATTTCCTCTCAGTCATATCTGACTTTGAAAAAC
ATCAGGATGAGGAAGCTTTTCTCAAGGACTCATTGGATCCTTTTTACCAA
ACTCCTCACCCTCCTCCACATTGGTCTTATAGCCCCTACTCTCAAGGCAC
TTTGGATTATTGGGATAATTCAGGAGAAGGGATTGATCATCGGCTTTCAT
ACCATGGAATGTATCATGGATCCTTTGATGGTTATAATGAAAAAGAAKCC
TKCTCTGACAGRCCGRCATCCTCTCCTGAAACCATTGTCAAAAGCAAAAA
GAGGCGGAAAAATAAATCTCCAGTTGAGGTAAGTTTAGAAATTATATCTT
ATTTGCATGTGACGTTACAATGAATATGCAGTACCCCCCCCCCCCCAAAG
GGGAGGTTATTCGTTTTAAAATTTAGTACATAGACTCCAATCTGATGGTG
CCGTCTGTTCATTTGTGACGTCAGTAAAAATGCTTTATTTACCGTGTGCG
GCATAATCTGTACAAGCTCCCTCCTGACAACATTATGTCTTCCAGGATGC
TCTGAAAATAATCAAGAAAGAGTCCCAACATAACCTGGAACTACCTAAAA
AACTTTTTTACAAGCACAATAATAGTGATAATCCCTTTCCTAAAAAACGA
GGTCCACGTCCAAAGGTGCTCACAAAGGAGGAAAAGAAGAAGAAACGAGT
GGATGCAAATGATCGAGAGAGACAAAGAATGAATCAGTTGAATACTGCAT
TTAACAATTTAAGGGACGTTCTACCTCGACATGGCAATGACAGAGAGCTC
TCAAAGTTTGAAACCATTCAAATTGCTAAAAATTATATTCAAACCCTTCA
CCAGCTTGTAACTTGAAGGTGATGACGACAAGACTTGGATCTTAAACTAT
GTATATATGGTGTACCGTGGTAAGACACCATTTCTACTCCTCTAGTCATT
GTAATCTTTTAAGTGGACATGTAGTCTGTTGTACGTACGTTTCTGTGATG
AATTTAATTACCTTTGATAATCATATACTTGTGAATAATTGTGTAACAAT
GGTTTAAAAAATAAAATACATATCAGTCCG
back to top
Add to Basket