EMLSAT00000002136, EMLSAT00000002136-697983 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002136
Unique NameEMLSAT00000002136-697983
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s139supercontigLSalAtl2s139:1352440..1354695 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002136 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002136EMLSAG00000002136-684902Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009440EMLSAE00000009440-718368Lepeophtheirus salmonisexon
EMLSAE00000009441EMLSAE00000009441-718369Lepeophtheirus salmonisexon
EMLSAE00000009442EMLSAE00000009442-718370Lepeophtheirus salmonisexon
EMLSAE00000009443EMLSAE00000009443-718371Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780674auto780674Lepeophtheirus salmonispolypeptide
EMLSAP00000002136EMLSAP00000002136Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002136

>EMLSAP00000002136 ID=EMLSAP00000002136|Name=EMLSAP00000002136|organism=Lepeophtheirus salmonis|type=polypeptide|length=626bp
MAFFSWLWQSLLYLLGYEVERDARDPSSIKIYLRTNNSSRIPLVINKDDD
LTIGDLKARGILPSSDHEIIFQGRVLSDDVVLLRDCDLGNQTVIDTVRKK
NSDPKKSSQNAPKTLTTLQLNSEDRGSSRSNGIFFVYCKECASLKHAKLR
VRCSNCESGAIILFSDPCSWDDVLHAAKISGSCQSCDSSNVPAKFYFKCV
ENFHKMESIYPPLYLIKSNSRDVPCLSCGEVENPVIVFECIDRHVLCIGC
FQLYSISNLNERSFLLDEENGYSLGCPLKCGHDSLIKETKHFHLLGNDQY
ERYMRFAAEEFVLKNGGVLCPRPNCGMGIMVKPDIRKVTCNLPEGCGFSF
CKNCLNGYHISSECPAVGENDQMTCVTTLPIHDSDRARWDNSQNXLMAIQ
NITKPCPSCRTPTESMSIFTRSLILRKQKLIYVLHNSLLSTSSSSCIFKK
EGQATYIPTSLRKFLTARNENMGQNTQLIYNSRMDFFAQTILLANFGTLT
FGSAWAMNFVTPFTREYGSFGFLSSNQISVIVSVTLIQFLALNILVFSSP
MRIYYDEVTQLYEARYIHPFIPGITSAFKFNPNSGKMITKYLPWLIVNDG
YKIKPLIVSRAHFKAPIFYRNILSQK
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mRNA from alignment at LSalAtl2s139:1352440..1354695-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002136-697983 ID=EMLSAT00000002136-697983|Name=EMLSAT00000002136|organism=Lepeophtheirus salmonis|type=mRNA|length=2256bp|location=Sequence derived from alignment at LSalAtl2s139:1352440..1354695- (Lepeophtheirus salmonis)
ATGGCCTTTTTTTCGTGGCTTTGGCAATCCCTTCTCTATCTTTTGGGCTA
TGAAGTGGAAAGGGATGCCAGGGATCCCTCCTCCATCAAAATCTATCTAC
GAACCAACAACTCATCCAGAATTCCTCTTGTCATCAATAAAGATGATGAC
TTGACCATAGGAGATTTAAAGGCTCGAGGAATTTTACCTTCAAGTGATCA
TGAAATTATTTTTCAGGGAAGAGTTCTCTCTGATGATGTTGTTCTTCTCC
GGGACTGTGATTTAGGGAATCAAACCGTCATTGACACTGTTAGAAAGAAA
AACAGTGACCCAAAAAAATCTTCACAAAATGCACCCAAAACACTCACTGT
AATGAAATTAGATTTTTTGAGTGTAAATTATTTTTTTTTTTTTCCATTCC
AGACTCTTCAATTGAATTCAGAAGATCGAGGATCATCTCGAAGTAATGGA
ATATTTTTTGTGTATTGTAAGGAATGTGCAAGTTTGAAACACGCCAAGTT
AAGAGTTCGTTGCTCTAATTGTGAGAGTGGGGCTATTATTCTCTTTAGTG
ATCCTTGCTCTTGGGATGACGTTCTACATGCAGCTAAAATTAGTGGTTCT
TGTCAGTCATGCGATAGTTCTAATGTTCCAGCTAAATTTTATTTTAAATG
TGTTGAAAATTTCCACAAAATGGAGTCAATATATCCTCCTCTATATCTCA
TCAAATCCAATTCACGTGATGTTCCTTGTTTGTCGTGTGGTGAAGTAGAG
AATCCTGTAATTGTATTTGAATGCATTGATAGACATGTACTATGCATTGG
CTGCTTTCAACTTTATAGTATATCTAATTTAAATGAGCGTAGCTTCTTAT
TAGACGAGGAAAATGGATATTCTCTTGGATGTCCTCTCAAATGTGGTCAT
GACTCTCTTATTAAAGAAACAAAACACTTTCACCTTCTTGGAAACGATCA
ATATGAGCGATACATGAGGTTTGCTGCAGAAGAATTTGTTTTAAAAAATG
GAGGCGTTTTGTGTCCTAGACCTAACTGCGGTATGGGAATCATGGTGAAG
CCAGATATACGTAAAGTTACTTGTAATTTACCTGAAGGATGCGGTTTTAG
TTTCTGTAAAAATTGCCTGAATGGTTATCATATATCATCTGAATGTCCGG
CAGTGGGAGAAAATGATCAAATGACTTGTGTGACGACATTACCTATCCAT
GATTCCGATAGAGCTAGGTGGGATAACTCTCAAAATKCTCTAATGGCAAT
TCAAAATATCACCAAGCCTTGTCCCAGCTGCCGTACACCTACAGAGAGGT
CAGGAGGGTGCATGCATATGYTATGTACAAGAGCAGGCTGCGGATTTGAG
TGGTGTTGGATGTGCCAAGACATCTGGTCTCGGTCATGTATGGGAGATCA
TTGGTTTGGATGAAATACTTATAATATACATTCTGTGATATACATAACAT
ATATGTAATATGCATTCAGTTAGTTGTTAACATTATTAATATATTAATTC
ATTTTATCTTTTTCCCCAAATATGGTTTATAATTTTATTTTATTTCTTAT
AAATAATATGTTTGTAGTATGAGTATATTCACTAGAAGTTTGATCCTTCG
AAAACAGAAACTTATTTATGTCTTACACAACTCTCTTCTATCAACTTCTT
CAAGTTCGTGTATCTTCAAAAAGGAGGGACAAGCTACATATATACCTACA
TCTCTAAGGAAATTTCTCACAGCACGCAACGAAAATATGGGACAGAACAC
GCAGTTGATCTATAATTCACGAATGGACTTTTTTGCTCAAACAATACTTC
TCGCGAATTTTGGAACTCTCACTTTTGGTATTTCTTTATCTCTTTTCAAA
CATAAAAATTACAAGTATTTTACTCGTAGGGAGCGCTTGGGCAATGAATT
TTGTGACTCCTTTCACTCGTGAATATGGTTCCTTTGGTTTTTTATCAAGT
AATCAAATTTCGGTGATAGTATCTGTAACGTTAATACAGTTTCTAGCTCT
GAATATCTTAGTTTTTTCGTCTCCCATGAGAATATATTATGACGAAGTAA
CTCAACTTTATGAAGCAAGATATATCCATCCATTCATTCCGGGTATAACT
AGTGCCTTTAAATTTAATCCCAATTCGGGTAAAATGATTACCAAATATCT
ACCCTGGTTGATTGTTAATGATGGATATAAAATTAAACCACTAATAGTCT
CAAGAGCTCATTTTAAAGCTCCCATATTCTATAGAAATATTTTATCTCAA
AAATAA
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