EMLSAT00000002146, EMLSAT00000002146-697993 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002146
Unique NameEMLSAT00000002146-697993
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s139supercontigLSalAtl2s139:1473318..1476139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002146 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002146EMLSAG00000002146-684912Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009488EMLSAE00000009488-718416Lepeophtheirus salmonisexon
EMLSAE00000009489EMLSAE00000009489-718417Lepeophtheirus salmonisexon
EMLSAE00000009490EMLSAE00000009490-718418Lepeophtheirus salmonisexon
EMLSAE00000009491EMLSAE00000009491-718419Lepeophtheirus salmonisexon
EMLSAE00000009492EMLSAE00000009492-718420Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780775auto780775Lepeophtheirus salmonispolypeptide
EMLSAP00000002146EMLSAP00000002146Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002146

>EMLSAP00000002146 ID=EMLSAP00000002146|Name=EMLSAP00000002146|organism=Lepeophtheirus salmonis|type=polypeptide|length=261bp
MNCLLSGIVLTTLFIVYELHAKTISPNPYMNHDNEVFSPIPIHGAVLTIA
DSVLEEIKPYYGILGHECELTXDHIYHAESSISQEIKFKLDLKISSIGTH
CIEETKTCIGVTVLVIPIDICSESYQPCFKLIDRDNILCIPDLSVHRYED
FNFYTEILDPSSNPMIQKVAQESTNFLYHFFNTTHPCPLHVTKILHASEQ
MDHGINYLLDIEVETNEIDFYCEHEVKHCKSVQLHQPSPHLCPFGKHFCL
IPTNLNDVTCI
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mRNA from alignment at LSalAtl2s139:1473318..1476139+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002146-697993 ID=EMLSAT00000002146-697993|Name=EMLSAT00000002146|organism=Lepeophtheirus salmonis|type=mRNA|length=2822bp|location=Sequence derived from alignment at LSalAtl2s139:1473318..1476139+ (Lepeophtheirus salmonis)
TATGTATAGAACACCATTTACTTAAAATGTTCAAGACTGAAAAATAATTA
ATTATATGATGTATTTATTCCTTATTTATGCTCTAGGTTTTATTTTTCAA
CACTTGCATAAAGTGGAGAACATATGCATTTTCTAAATGCATTTTCTAAT
GAGGGAGAGAGAGGGAGATCAATTGAACATCAAAACTTGATGTTGTAGTA
TTGATTTACACGATGAATTGCTTACTCAGTGGTATTGTTTTAACTACCCT
ATTTATCGTTTATGAGCTACATGCAAAGACGATTTCGCCAAATCCCTACA
TGAATCATGATAATGAAGTCTTTAGTCCAATACCAATCCATGGAGCCGTC
CTAACTATTGCCGACAGTGTTTTGGAAGAAATTAAACCATATTATGGAAT
CCTTGGACATGAATGTGAACTCACCTTSGATCACATTTATCATGCAGAGT
CTTCCGTATGAAATGGGGTTAATCCTTTTTCTNNNTTATTTATTTAAAAA
AATTATATTTGATCGTAGATATCCCAAGAAATAAAATTTAAGCTAGATCT
TAAAATCTCATCAATCGGAACTCATTGTATTGAAGAGACTAAGACCTGTA
TTGGAGTGACGGTATTAGTTATTCCAATTGATATTTGCTCTGAATCCTAC
CAACCATGCTTCAAATTGATCGATAGAGATAATATTCTATGTATTCCCGA
TTTGAGTGGTAAGATTTTCTTGTTTACGTGACCAAATGATGCACAAGTAT
CCACACTTTTAAAAGAGTATTTCAATAATAATTTTATGTTTGCAAGAATA
TGATCTCTTGGAAGAATATACACCAACATTCAGCCAGATCGGTCTATTTC
ATTCTGTTTGGCGTTTGTTTTAATCGAGGAATCGGCTGGAAAGATTATGC
CGACTGTTTTTTGAATGCACATGGAATAATCTTCATTGACAGTCTGGAAA
AAAGTAAAACTATTACAGGTGTATATTATTCATCGTTATTGGACTGTTTA
AAAACCGAGGAGCAAGAAAAACACCCAAGATTGGTCCACAAAAAGTATTT
TTCCATCACGACAATGCACCAGCTCACACCTTAGCAATTGTGGTCGCAAA
TTAATGGAAATAAGGTTACATCTAGAGATGCCAAAAGAACTAGCAATATC
ACGCACATTCACTCTTGTGTCTTCCATCCCCATATCATAGATTTTATCAA
TACTTCCTTGAGTAGTAAACTCAACAGTACGTCCAGAACGTTCAGGCTCA
CTTTTGTTCATATAACCACTCCTAAAATTTTGAAACCACTTACTAACTAT
TCTAATGGAAGGTACAGACTCCCCTTACTGTATATCAGCTTCGTTTTAGT
CTCCTGAGGCGTTTTGCCTTAAATAAAGTAATGTTTAATCAATACAAGAA
ATTCTTTTTCGTCCAGTTTTTGAAAATTACTCCACTCTTCGATTCAAACG
AATGCCAAACACAAAGAGTTAGACAAATCTGGCTGAAAATTGGTGTGTGT
TCTTCCCAGAGATGATATTAACTAACAATAACCTCAATACGCGATAGTAG
TGCCATCTTTTGGACTTTGTAAGGATTTTTCGAACGACCCTCGTATGTAT
TCACAAGGTTAATAGAAATACAAGGTTATACCTTAACACGTGTACGACTG
ATGTTTAACTTCCACGAAGCTTTTAATATTGACATCATAGTAGATGAGTA
GTTGCGTGTTTTGTCAAAATCTGTTTTTATTACCCAGGAGTCGGTACGAT
ACATCAAATTAAAAATTCTAGTAATAGTGACGTCATATACTATGATTGGT
TACGTGTTTTGTCAAAATCTGCATGTCTTGTCTAACAGTCGGTATGATAA
ATCCAATTAAAAATTCTAGTAAGCCCGATTACATGACTGTCTAACCTTGT
ATTTCTATTAACCTTGTATAAACATACATCCCAATATTTAAAACATACTT
CAGTGAATAATAGGCTTTGTATTCAAACTTCAGAGATGAGTTCAGATGTC
CAAGAATGTTAGCTTTAGTGTAATAATTCATTTTATTTGAGAGTTAATTT
GACCCGTATGGCCTTTCAAATAAAATCAATCAATTTTTAATGACAATTCA
TTTTTGCTTCTTTAAGTGAAACTTGTAGCCCTTCCAAAGGATTAATCTTA
ATGAATAATTTGTCGAATACTACAAATGTAATCCATATTAAATTTTGGAA
AAATCTTTCTAGTTTGATTTTGTGTTGATGGGGATCATATTTGAAACTTG
TTAATTTATAGATATTTTTTAAATGTATGTATAATTAGTTCACAGATACG
AAGACTTCAATTTCTATACAGAAATATTAGATCCTTCCTCAAACCCAATG
ATCCAAAAAGTTGCTCAAGAGTCAACTAATTTTCTCTATCATTTCTTCAA
TACTACTCATCCCTGTCCTCTCCATGTTACGAAAATTCTACATGCCAGCG
AACAAGTACATAATATTTGGGTACTCTATTGTGTTTTAACTCCTCATTTT
CATTATAGATGGATCATGGAATTAATTACTTATTAGATATTGAAGTGGAA
ACGAATGAAATTGATTTTTACTGTGAGCATGAAGTGAAGCATTGTAAAAG
TGTACAGCTGCATCAACCCTCACCACATCTTTGCCCATTTGGGAAACACT
TTTGCTTGATACCCACAAATTTAAATGATGTTACTTGTATATAAGTTAAT
TCAAGTAAAAAAAGAAAAGAAAGAAATCTATTAAAATATCTCTAAAGGTC
ACACGAATAAAATATACACTAATATTAGTGTCAATCAAAAAATAATCATC
CACACTTTAACTTACATCAGAA
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