EMLSAT00000002310, EMLSAT00000002310-698157 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002310
Unique NameEMLSAT00000002310-698157
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1438supercontigLSalAtl2s1438:84196..86390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002310 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002310EMLSAG00000002310-685076Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010222EMLSAE00000010222-719150Lepeophtheirus salmonisexon
EMLSAE00000010223EMLSAE00000010223-719151Lepeophtheirus salmonisexon
EMLSAE00000010224EMLSAE00000010224-719152Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771712auto771712Lepeophtheirus salmonispolypeptide
EMLSAP00000002310EMLSAP00000002310Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002310

>EMLSAP00000002310 ID=EMLSAP00000002310|Name=EMLSAP00000002310|organism=Lepeophtheirus salmonis|type=polypeptide|length=572bp
MNSLSEVQRIIGLSLSKIQIGRNQRGGLPLHKNLLVATVLNKARDLYMQE
TMYMNYKMMTGQLNAAQMSCMAMHVPSAPSPLNHPNGMPASSDNSGGRLS
XPPPPQQNLHPASSSMEPTERTGNAGMSSPYEEEASCSSSSNKSLSAQEP
SLSGPLSHNNSLLTPPSSRAHPSPSDEGFIDEPDCDCDARNFSSESTRVP
FQYCYQCAPFHPSNGRGPXLVPAAKPSIRHHHQSEEESLSGDGMVERLVN
GAGECSSGSSHPVASNQQHHSNTNFTIYDMDSKATELRTTSTSNSSSSTT
LSHSGLRKRRISDSNESLSRSLSGKXSRSNSGGGDESPDEYSSNNNCSST
VGSQFQLQTHSPQSGSSDSSSDEEVFHPAFRNGNHHAPSPASLTNGLAHQ
XHHPHSSSPQQHNXHHHIHHQAAAAAAASHHHFQSSSSSLLSSTLSSSAP
SGSSSSVSISASQQSPTNNHSSSCNNPPPSMEIDQITSLVSIFSFGQQIM
AXXAAASEASKRLQSHNNKSYSELEEDNENQEGEHHEEEATEERIRGEVS
TSPKDPTEEEDNNTDHIHFCST
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mRNA from alignment at LSalAtl2s1438:84196..86390-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002310-698157 ID=EMLSAT00000002310-698157|Name=EMLSAT00000002310|organism=Lepeophtheirus salmonis|type=mRNA|length=2195bp|location=Sequence derived from alignment at LSalAtl2s1438:84196..86390- (Lepeophtheirus salmonis)
ATGAACTCCCTCTCTGAGGTCCAACGCATCATTGGACTCTCACTGAGTAA
AATACAAATCGGTCGGAATCAACGAGGTGGATTACCCCTTCACAAAAACC
TCCTTGTGGCCACCGTTCTTAATAAGGCCCGTGATCTCTACATGCAAGAA
ACCATGTACATGAACTACAAAATGATGACTGGGCAACTTAATGCAGCTCA
AATGAGCTGCATGGCCATGCATGTCCCTTCTGCCCCATCACCCCTCAATC
ATCCCAATGGAATGCCCGCCTCATCTGATAATAGTGGTGGACGACTGAGT
CANCCACCACCCCCACAACAAAATCTTCATCCAGCTTCCTCTTCCATGGA
GCCGACTGAGAGGACTGGTAATGCGGGAATGTCTTCCCCCTATGAAGAAG
AAGCTTCTTGTTCTTCCTCCTCCAATAAATCCCTCTCTGCTCAAGAACCT
TCTCTATCAGGACCCTTGTCTCACAACAATTCTCTCCTCACACCCCCCTC
CTCAAGGGCTCACCCTTCTCCCTCTGACGAGGGCTTTATTGATGAGCCTG
ACTGTGATTGTGATGCGCGTAACTTTAGTTCAGAGTCCACACGTGTCCCC
TTCCAATACTGCTACCAATGTGCTCCTTTTCATCCCTCAAATGGCAGAGG
TCCTKCTCTTGTACCCGCTGCCAAACCTTCGATTAGGCATCATCATCAAT
CTGAAGAAGAATCTTTAAGTGGAGACGGCATGGTTGAGCGACTCGTGAAT
GGTGCTGGGGAGTGTAGTAGTGGTAGTTCTCATCCAGTTGCATCAAATCA
GCAGCATCACAGCAACACAAATTTCACCATCTATGATATGGACTCTAAAG
CTACAGAGCTTCGAACAACCTCTACTAGTAATAGCAGCAGTAGCACGACA
CTTAGTCATTCCGGTCTTCGTAAAAGACGTATCTCAGATTCCAATGAATC
ATTGAGTAGGTCCTTGTCMGGGAAGAYAAGCCGATCCAATTCTGGAGGAG
GAGATGAAAGTCCTGATGAATACTCATCAAATAATAATTGTAGTAGTACT
GTTGGTAGTCAATTCCAGTTACAAACCCATTCTCCTCAATCTGGTTCATC
TGATTCTTCTTCTGATGAGGAGGTAATTATTATCCTTTCATCTTTTTTAT
CAATTTATTTATACATACTACATAAATATTGAGGAAACAAGATGTTTAAA
GCACACAGATTAATTATCATTGATTCTTCTTTCAGGTCTTTCACCCTGCA
TTTCGCAATGGCAATCACCATGCTCCATCTCCTGCCTCACTCACCAATGG
CCTTGCCCATCAATRCCATCATCCACACAGTAGCAGTCCTCAACAACATA
ATCRCCATCATCATATTCATCACCAAGCAGCAGCTGCAGCCGCGGCGTCT
CATCACCATTTCCAGTCCTCTTCATCATCCCTCCTCAGTAGTACATTATC
CTCTTCAGCACCCTCAGGATCATCCTCATCCGTCTCAATATCAGCATCAC
AACAATCTCCCACGAATAACCATTCTTCCTCCTGCAACAATCCTCCTCCA
TCTATGGAAATTGATCAAATTACAAGTCTCGTCTCCATATTCTCATTCGG
TCAGCAAATCATGGCGGSAGSCGCTGCCGCCTCCGAAGCATCCAAACGAC
TTCAATCTCACAATAACAAATCCTATAGCGAGTTAGAAGAAGACAATGAG
AATCAAGAGGGGGAACATCATGAGGAAGAGGCGACAGAGGAGAGGATACG
AGGTGAGGTCTCTACTTCTCCTAAGGACCCCACTGAGGAAGAGGACAATA
ATACTGACCACATTCATTGTGCTAGCAGAAGTTGTGAAGATGAAAAGTCC
AGCAGTAAGCATAATAACAGCAAAAAAGAAGAAGCGGATTCTGACTCAGA
GTCAGATACATCCTCAGACTCTGGACATTCATCTGATGATCTCGAAGCCG
CCTCTTCACCCGAAGAATCCTCCTCTCTCTCCGCTGCTAATAATAATTCT
CCAGGCTCTGAACTATCTTCTAAGACATCCCCACCACCAACAACGAATCC
TGGAGGATGCTCTGCTCAAGAAGTGAGTAGCGTAGGGAAAAAGGACTCTA
CAAATTGTATACTCCCAGTTGCGACTGTATAAAAAACTCAGANAATATTC
TTGTTATTATTATTATTGTTATTTTTGTCAGTTTGTAGTACGTAA
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