EMLSAT00000002320, EMLSAT00000002320-698167 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002320
Unique Name	EMLSAT00000002320-698167
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s143	supercontig	LSalAtl2s143:485890..490805 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002320 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002320	EMLSAG00000002320-685086	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010268	EMLSAE00000010268-719196	Lepeophtheirus salmonis	exon
EMLSAE00000010269	EMLSAE00000010269-719197	Lepeophtheirus salmonis	exon
EMLSAE00000010270	EMLSAE00000010270-719198	Lepeophtheirus salmonis	exon
EMLSAE00000010271	EMLSAE00000010271-719199	Lepeophtheirus salmonis	exon
EMLSAE00000010272	EMLSAE00000010272-719200	Lepeophtheirus salmonis	exon
EMLSAE00000010273	EMLSAE00000010273-719201	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778078	auto778078	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002320	EMLSAP00000002320	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s143:485890..490805+

protein sequence of EMLSAP00000002320

>EMLSAP00000002320 ID=EMLSAP00000002320|Name=EMLSAP00000002320|organism=Lepeophtheirus salmonis|type=polypeptide|length=618bp
MASPSSSPAMALSLRSRQINTIQSLLKADDWKVLVYDSSGEDIICPLMKV
KDLREFGVTLNAHLKDESREFVPDVTALYLVLPSSENIQRIIKDLEKGLY
DAYKFFFLTPIPRHRLEEFASGAFAAPNNSIKSVXDQYLNFISLEENMFI
LGRQKAVKYESLHKIDVTDTEMDQMIEQMVDGLFSVCVTLCTVPIIRCPK
GNAAEAVARKLDAKIRQNLSDARNSLFTHESGKGQYSFCRPVLIILDRQI
DLATSLHHTWTYQALAHDVLNYSMNKVTIVEKGSGESETSGKKTRGCSLD
PTDTFWNSHKGTPFPQVAEKIQEDLEEYKTREDQIKKIKHELGLDEEDLL
TGNTEKLTSAMSSLPELLEKKRLIDMHTSIATCILDHIKQRRLDVFFELE
EKIMSKQTLNERALLDIFEDPEAGTPEDKIRLFLIYFLCSGEEVSDTEIE
QYERILSELGCDITPFHYLKRWRTINQLHSSNFTQSTTTDYTGGGTKTIS
MFGKLMAQSSSFVMEGVKNFVVKKHALPATKITEEIMEEGIVFMVGGGNY
IEYQNLMDSTQAKSGFTSVASNNVNLSAXAXXAGVTSSIGNRRIIYGCSA
LTNASDTLRQLSLLGKEL

mRNA from alignment at LSalAtl2s143:485890..490805+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002320-698167 ID=EMLSAT00000002320-698167|Name=EMLSAT00000002320|organism=Lepeophtheirus salmonis|type=mRNA|length=4916bp|location=Sequence derived from alignment at LSalAtl2s143:485890..490805+ (Lepeophtheirus salmonis)
GAGAACTATTAGAGGAAGCTATAGAATAGATATGATCATTCCTATATATA
ATTACTTAGGTAATGAAGATACTAATTTTTTCCAAGGTAGCTAGGGTACA
TAGTTCATACAAATCATAATCAGGGTGGTTTATAGAAATAGTAATATAAT
AACTACTACATTACTGACTTGTAAGAGTGTTGTTTTCATATGTGACGTCA
CATAACCTCATCTGACGTTTCGCTATGTTTTGACGATAACTTAAGTTGTG
TTAAGCGTAAACGTCATCATTCATTCAAGTCCTCTACTTTCGTTATTTAT
TGAATATTGGACGACTGACGACGACTGATTATTCCCACAGCATTCAATTA
TTAATTATTGGACTCAATGGCGTCACCCTCCTCCTCACCAGCCATGGCTT
TGTCCCTCAGGAGTCGTCAAATTAACACAATTCAGAGCCTATTAAAGGCA
GATGATTGGAAGGTCCTCGTCTACGACTCTTCGGGGGAAGACATCATTTG
CCCACTCATGAAAGTCAAAGATCTTCGTGAATTTGGAGTCACTCTTAATG
CGCATCTCAAGGATGAATCTCGGGAATTCGTGCCTGACGTGACGGCACTT
TATTTGGTGCTTCCCTCTTCCGAAAACATTCAAAGAATCATCAAGGATTT
AGAAAAAGGCCTCTATGATGCATACAAATTCTTTTTCCTCACCCCCATTC
CACGCCACAGACTCGAAGAGTTTGCCTCAGGCGCATTTGCAGCCCCTAAT
AATTCCATTAAAAGCGTASTTGATCAATATTTAAACTTTATTTCCCTAGA
AGAAAATATGTTCATTCTGGGACGTCAAAAGGCCGTCAAATACGAGTCCC
TTCATAAAATTGACGTTACGGATACAGAGATGGATCAAATGATTGAGCAA
GTGAGTCGGACTAACTCCATTCTAATTCTAACAATATATCTATATTTCTT
TTACAGATGGTGGACGGCCTTTTCTCTGTGTGTGTCACCCTTTGTACAGT
TCCTATCATTAGATGTCCCAAAGGTAATGCAGCAGAGGCAGTAGCTAGGA
AGCTGGACGCCAAAATTCGTCAAAATTTGAGTGATGCCCGAAATTCTCTC
TTCACACATGAAAGTGGGAAGGGGCAGTATAGTTTTTGCCGACCCGTTTT
AATCATTCTTGATAGACAAATCGATTTGGCTACAAGTCTTCATCATACGT
GGACATATCAGGCTCTGGCCCACGATGTTCTTAATTATAGTATGAATAAA
GTTACAATTGTAGAGAAGGGAAGTGGGGAGAGTGAAACATCAGGGAAAAA
AACACGTGGGTGTAGTTTAGATCCCACGGATACATTTTGGAACTCTCACA
AGGGAACTCCTTTTCCACAAGTGGCTGAGAAGATTCAAGAGGACTTGGAA
GAATATAAGACTCGAGAGGATCAAATTAAGAAAATTAAACATGAATTAGG
CCTTGATGAAGGTATCTTATTTAGTAATTAAGTATTCAATTGTTCATTGG
GTTAAATAACTCATATTTCTAGAGGATTTATTGACGGGGAATACAGAAAA
GTTAACGTCTGCAATGTCTTCCCTTCCTGAACTTTTGGAAAAAAAGAGAT
TAATCGATATGCACACAAGTATTGCTACTTGCATTTTAGATCATATTAAA
CAACGTCGATTGGATGTGTTTTTTGAGTTGGAAGAGAAAATAATGTCTAA
GCAAACACTCAATGAGAGGGCTCTCTTGGATATTTTTGAAGATCCAGAAG
CTGGAACCCCTGAAGATAAAATACGATTGTTCTTGATTTATTTCCTTTGC
TCTGGAGAAGAGGTATCAGATACGGAGATCGAGCAATATGAAAGAATTCT
ATCGGTAGGATTGAGTTATTATTGTAAAAATTCAATTGACCCATAATTTT
ATTTAATTAGGAATTGGGTTGTGATATAACTCCCTTTCATTATCTAAAAC
GATGGCGAACAATCAATCAACTGCATTCGTCTAATTTTACACAGTCTACA
ACTACGGACTATACTGGCGGCGGRACAAAAACCATATCCATGTTTGGTAA
GCTCATGGCTCAATCTTCTAGCTTTGTTATGGAAGGTGTCAAAAACTTTG
TTGTTAAAAAACATGCACTCCCGGCAACAAAAATCACCGAAGAAATCATG
GAGGTAATAAATAAATTATTTTTTTGTACTTAATTATTCCATTATATTTA
GGCTCGCTCAGGACAGCATCAAGATAATTATTTATATTTGGATCCAAAAA
TTCTGAAGGGATCCTTAAAAGAAATTTCCAAAACAAAGAATTCTTTTCAA
GTACGTATACATATATCCGCGAATTTATTTTTAATTAATTATTCTTACAT
AGGAAGGAATTGTTTTTATGGTCGGAGGAGGTAACTACATTGAATATCAA
AACTTAATGGATAGCACGCAAGCTAAATCTGGGTTTACCTCCGTTGCTTC
GAATAATGTAAATTTATCAGCTRTGGCTGSAAMAGCCGGKGTTACATCTT
CCATTGGAAATAGAAGAATAATTTATGGATGTTCTGCTTTAACTAATGCC
AGTGATACTCTTAGGCAATTGTCGCTTTTAGGAAAGGAATTGTAATATAG
AATCAATTTTCTGGATTTATTCATCGGCCCTATCTCTTTTTTTATGAAGT
CATCTAATGTTTTTTTTTATATCTTGCTTTTATGATGTTTCCCTGATGCC
CTCCTCAACTTGTTTTCACTAAAGTTTGCTATAAATCATGTTTAAAATTT
TTTTATAAAGATTTATATTGTTTATATGGGAGTTGATATGATGGGATAGC
GTAGTCTCCATTTTTGACTGTGTAACTATTCGCCAATTCGATAAATACGT
CCGTTTTGGATAGAACAATAAAGCGTTCTTAATTTTCATTTATGAGAGTC
CTTCTTCGATACCCAATTTTCTAATTATAAAATTATGTACCAGAGGTTGT
TAAAAGTTCATATGTTGCAAGCCCAAGTCTCTGATCACAGGTCCAAGTGC
TTGAGTCATCAAAGTCAATGAAAAACAAAGTCAAGTCGAGTAATAAGTCT
TCGAATGGAGTCCAAGTCACCACCTCTAATATGTAGCCAGATGCAAATCC
GTAATTTTACTAGCTTAGTGCTTTATAGTTCTGGAACAATAAGGGATGAA
TACAAGTCAATGCTGATATAAAAGTAAAAATGTCTAGATACTTATGAGTA
ATATCTTTAAATTTTCGGCAAAGCCAAAAGTACAAGTTAATTTAAAACCT
TACTTTTTAGTAGGAGTCTTAAATACTTATGTCTGTCATCAGCAAAATGT
TCTATAAGGTTATTCGAGATATTTGGAGAAGTAATATTGGATTAAAAGCA
TTCATTTTTAATAATAATGGCATATTACATTGGCATAATTATGAAAAGTA
ATTCATTTTTGGACTAGAACCATTAAAAGACAAGCATTCAGTATGTATAA
TAAATATTGAGATTGTAAGGAAAGGAAATATAATATCAAGCTGCATAGAA
AGGAATATTCTATTCAGTTGTAACATTCGTCAATTCTAAATGATTGCTCC
ATTCAGCATTGTAATAGCTAAAGTCAACATATGGGAGAATACGGCCAAAG
TTATCGACAGGCAAACTCTCAATTCCCTGCTTCGAGAGCATATCCGAACT
CTCAGTTGTTGTAGATGTGTGAATAGCCTTAAAAGTAGTGTCCTCTCTTG
TGGAAGATGAGCGGGACTTACTTCTTGATCTAGAAGGAAGAGAGCCCAAG
TCACAATTTAAATTATGTACAAGAAGAGTAATGTCTTCTCGAAATCGATT
CACATCATCCTCAAACTTATCTTTGTGTAAACGAACAATTTTATCGACGA
CACTTTGTGCTACTCCCGTAACAGTCACGTTGGACTCAAATTCTTCATAG
ACGAGACGGGCCAATTCTTTATCTAAATCAACTCCATCCTCCTCATCCCA
CAATTCCATCATAGTATCCATCAAGGGACGAGAGTATATGAGCAAGAAAT
AAGAATCTGAACCAACTTGTATACTTCCATGAATTTCAGGCTCACATAGA
ACAGGAACACCTTTTGCATTCTTGAGCAATAGTTCCTCTTCTTTGAAGTA
TCCACTTTTAGCTCGGTGATACCCTAAACAACGCGTGTATCCACGAGGGC
CGCCCAAAACTTTTTTTAAGTTATGAGGTTCCAGACCCAAGTGTTGTAAA
CGAAGTTCTTCGTCTTCATTGACACCGAGAACATGATCAATTGATAATTT
GACAATGTTAAAGTTCTTTAAGTCATGTTCTTTATCCGTATCCTCATTTT
TCTTGGATATTAAAAGTGCTCCCGTATCACCCGCATTGGCAATAAAGAGT
CGAGAATCATCAAGAAGAACTCCTATTGTAGCTGAAGAGCCCGAATCGGA
TGAAAAAGACTCTGGAGATGTTTTTTTGTTATGAGCTATAAAATAATGTA
AAATATATTAGGAAAGTGTGCGATAGTTGGATTGGTGATTTATTTAAATT
ATTACTTAATGCACGGGCAAGAGACTCATTTAAGGACTCGAAATAATCTC
TATCTGAGGAGATGAATGCAGCCTTTAGAACTTCCTTGATAGACTCATCA
GAGGTGCTTGGATCTATTTGTCCTAAACAGACCTCTGCTGGCATTTTCTT
GGAGGCAAAATCCGACATCTTGCATCCAGAAAATCCATCCAGGACGCCCA
AAGAAATAAATACATTTTTATTTTTATGATGACTTCACCTCTCAAAGAAG
ACTCAAGAGATAAACTAGATTCGAAATGAAAATGTAAAATCCTACAAATG
ACACTATGTAAAAATCAATGATGTTAATGAATTAATGCTAATTAGTAATT
AATGAGATGAAGTCATCCATAAAATGCCCAAACCGAAGAAGCTCATTCCA
GTGAGTCTAAAATGAA

Add to Basket

Search form