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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s143 | supercontig | LSalAtl2s143:485890..490805 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002320 >EMLSAP00000002320 ID=EMLSAP00000002320|Name=EMLSAP00000002320|organism=Lepeophtheirus salmonis|type=polypeptide|length=618bp
MASPSSSPAMALSLRSRQINTIQSLLKADDWKVLVYDSSGEDIICPLMKV
KDLREFGVTLNAHLKDESREFVPDVTALYLVLPSSENIQRIIKDLEKGLY
DAYKFFFLTPIPRHRLEEFASGAFAAPNNSIKSVXDQYLNFISLEENMFI
LGRQKAVKYESLHKIDVTDTEMDQMIEQMVDGLFSVCVTLCTVPIIRCPK
GNAAEAVARKLDAKIRQNLSDARNSLFTHESGKGQYSFCRPVLIILDRQI
DLATSLHHTWTYQALAHDVLNYSMNKVTIVEKGSGESETSGKKTRGCSLD
PTDTFWNSHKGTPFPQVAEKIQEDLEEYKTREDQIKKIKHELGLDEEDLL
TGNTEKLTSAMSSLPELLEKKRLIDMHTSIATCILDHIKQRRLDVFFELE
EKIMSKQTLNERALLDIFEDPEAGTPEDKIRLFLIYFLCSGEEVSDTEIE
QYERILSELGCDITPFHYLKRWRTINQLHSSNFTQSTTTDYTGGGTKTIS
MFGKLMAQSSSFVMEGVKNFVVKKHALPATKITEEIMEEGIVFMVGGGNY
IEYQNLMDSTQAKSGFTSVASNNVNLSAXAXXAGVTSSIGNRRIIYGCSA
LTNASDTLRQLSLLGKEL back to topmRNA from alignment at LSalAtl2s143:485890..490805+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002320-698167 ID=EMLSAT00000002320-698167|Name=EMLSAT00000002320|organism=Lepeophtheirus salmonis|type=mRNA|length=4916bp|location=Sequence derived from alignment at LSalAtl2s143:485890..490805+ (Lepeophtheirus salmonis)
GAGAACTATTAGAGGAAGCTATAGAATAGATATGATCATTCCTATATATA
ATTACTTAGGTAATGAAGATACTAATTTTTTCCAAGGTAGCTAGGGTACA
TAGTTCATACAAATCATAATCAGGGTGGTTTATAGAAATAGTAATATAAT
AACTACTACATTACTGACTTGTAAGAGTGTTGTTTTCATATGTGACGTCA
CATAACCTCATCTGACGTTTCGCTATGTTTTGACGATAACTTAAGTTGTG
TTAAGCGTAAACGTCATCATTCATTCAAGTCCTCTACTTTCGTTATTTAT
TGAATATTGGACGACTGACGACGACTGATTATTCCCACAGCATTCAATTA
TTAATTATTGGACTCAATGGCGTCACCCTCCTCCTCACCAGCCATGGCTT
TGTCCCTCAGGAGTCGTCAAATTAACACAATTCAGAGCCTATTAAAGGCA
GATGATTGGAAGGTCCTCGTCTACGACTCTTCGGGGGAAGACATCATTTG
CCCACTCATGAAAGTCAAAGATCTTCGTGAATTTGGAGTCACTCTTAATG
CGCATCTCAAGGATGAATCTCGGGAATTCGTGCCTGACGTGACGGCACTT
TATTTGGTGCTTCCCTCTTCCGAAAACATTCAAAGAATCATCAAGGATTT
AGAAAAAGGCCTCTATGATGCATACAAATTCTTTTTCCTCACCCCCATTC
CACGCCACAGACTCGAAGAGTTTGCCTCAGGCGCATTTGCAGCCCCTAAT
AATTCCATTAAAAGCGTASTTGATCAATATTTAAACTTTATTTCCCTAGA
AGAAAATATGTTCATTCTGGGACGTCAAAAGGCCGTCAAATACGAGTCCC
TTCATAAAATTGACGTTACGGATACAGAGATGGATCAAATGATTGAGCAA
GTGAGTCGGACTAACTCCATTCTAATTCTAACAATATATCTATATTTCTT
TTACAGATGGTGGACGGCCTTTTCTCTGTGTGTGTCACCCTTTGTACAGT
TCCTATCATTAGATGTCCCAAAGGTAATGCAGCAGAGGCAGTAGCTAGGA
AGCTGGACGCCAAAATTCGTCAAAATTTGAGTGATGCCCGAAATTCTCTC
TTCACACATGAAAGTGGGAAGGGGCAGTATAGTTTTTGCCGACCCGTTTT
AATCATTCTTGATAGACAAATCGATTTGGCTACAAGTCTTCATCATACGT
GGACATATCAGGCTCTGGCCCACGATGTTCTTAATTATAGTATGAATAAA
GTTACAATTGTAGAGAAGGGAAGTGGGGAGAGTGAAACATCAGGGAAAAA
AACACGTGGGTGTAGTTTAGATCCCACGGATACATTTTGGAACTCTCACA
AGGGAACTCCTTTTCCACAAGTGGCTGAGAAGATTCAAGAGGACTTGGAA
GAATATAAGACTCGAGAGGATCAAATTAAGAAAATTAAACATGAATTAGG
CCTTGATGAAGGTATCTTATTTAGTAATTAAGTATTCAATTGTTCATTGG
GTTAAATAACTCATATTTCTAGAGGATTTATTGACGGGGAATACAGAAAA
GTTAACGTCTGCAATGTCTTCCCTTCCTGAACTTTTGGAAAAAAAGAGAT
TAATCGATATGCACACAAGTATTGCTACTTGCATTTTAGATCATATTAAA
CAACGTCGATTGGATGTGTTTTTTGAGTTGGAAGAGAAAATAATGTCTAA
GCAAACACTCAATGAGAGGGCTCTCTTGGATATTTTTGAAGATCCAGAAG
CTGGAACCCCTGAAGATAAAATACGATTGTTCTTGATTTATTTCCTTTGC
TCTGGAGAAGAGGTATCAGATACGGAGATCGAGCAATATGAAAGAATTCT
ATCGGTAGGATTGAGTTATTATTGTAAAAATTCAATTGACCCATAATTTT
ATTTAATTAGGAATTGGGTTGTGATATAACTCCCTTTCATTATCTAAAAC
GATGGCGAACAATCAATCAACTGCATTCGTCTAATTTTACACAGTCTACA
ACTACGGACTATACTGGCGGCGGRACAAAAACCATATCCATGTTTGGTAA
GCTCATGGCTCAATCTTCTAGCTTTGTTATGGAAGGTGTCAAAAACTTTG
TTGTTAAAAAACATGCACTCCCGGCAACAAAAATCACCGAAGAAATCATG
GAGGTAATAAATAAATTATTTTTTTGTACTTAATTATTCCATTATATTTA
GGCTCGCTCAGGACAGCATCAAGATAATTATTTATATTTGGATCCAAAAA
TTCTGAAGGGATCCTTAAAAGAAATTTCCAAAACAAAGAATTCTTTTCAA
GTACGTATACATATATCCGCGAATTTATTTTTAATTAATTATTCTTACAT
AGGAAGGAATTGTTTTTATGGTCGGAGGAGGTAACTACATTGAATATCAA
AACTTAATGGATAGCACGCAAGCTAAATCTGGGTTTACCTCCGTTGCTTC
GAATAATGTAAATTTATCAGCTRTGGCTGSAAMAGCCGGKGTTACATCTT
CCATTGGAAATAGAAGAATAATTTATGGATGTTCTGCTTTAACTAATGCC
AGTGATACTCTTAGGCAATTGTCGCTTTTAGGAAAGGAATTGTAATATAG
AATCAATTTTCTGGATTTATTCATCGGCCCTATCTCTTTTTTTATGAAGT
CATCTAATGTTTTTTTTTATATCTTGCTTTTATGATGTTTCCCTGATGCC
CTCCTCAACTTGTTTTCACTAAAGTTTGCTATAAATCATGTTTAAAATTT
TTTTATAAAGATTTATATTGTTTATATGGGAGTTGATATGATGGGATAGC
GTAGTCTCCATTTTTGACTGTGTAACTATTCGCCAATTCGATAAATACGT
CCGTTTTGGATAGAACAATAAAGCGTTCTTAATTTTCATTTATGAGAGTC
CTTCTTCGATACCCAATTTTCTAATTATAAAATTATGTACCAGAGGTTGT
TAAAAGTTCATATGTTGCAAGCCCAAGTCTCTGATCACAGGTCCAAGTGC
TTGAGTCATCAAAGTCAATGAAAAACAAAGTCAAGTCGAGTAATAAGTCT
TCGAATGGAGTCCAAGTCACCACCTCTAATATGTAGCCAGATGCAAATCC
GTAATTTTACTAGCTTAGTGCTTTATAGTTCTGGAACAATAAGGGATGAA
TACAAGTCAATGCTGATATAAAAGTAAAAATGTCTAGATACTTATGAGTA
ATATCTTTAAATTTTCGGCAAAGCCAAAAGTACAAGTTAATTTAAAACCT
TACTTTTTAGTAGGAGTCTTAAATACTTATGTCTGTCATCAGCAAAATGT
TCTATAAGGTTATTCGAGATATTTGGAGAAGTAATATTGGATTAAAAGCA
TTCATTTTTAATAATAATGGCATATTACATTGGCATAATTATGAAAAGTA
ATTCATTTTTGGACTAGAACCATTAAAAGACAAGCATTCAGTATGTATAA
TAAATATTGAGATTGTAAGGAAAGGAAATATAATATCAAGCTGCATAGAA
AGGAATATTCTATTCAGTTGTAACATTCGTCAATTCTAAATGATTGCTCC
ATTCAGCATTGTAATAGCTAAAGTCAACATATGGGAGAATACGGCCAAAG
TTATCGACAGGCAAACTCTCAATTCCCTGCTTCGAGAGCATATCCGAACT
CTCAGTTGTTGTAGATGTGTGAATAGCCTTAAAAGTAGTGTCCTCTCTTG
TGGAAGATGAGCGGGACTTACTTCTTGATCTAGAAGGAAGAGAGCCCAAG
TCACAATTTAAATTATGTACAAGAAGAGTAATGTCTTCTCGAAATCGATT
CACATCATCCTCAAACTTATCTTTGTGTAAACGAACAATTTTATCGACGA
CACTTTGTGCTACTCCCGTAACAGTCACGTTGGACTCAAATTCTTCATAG
ACGAGACGGGCCAATTCTTTATCTAAATCAACTCCATCCTCCTCATCCCA
CAATTCCATCATAGTATCCATCAAGGGACGAGAGTATATGAGCAAGAAAT
AAGAATCTGAACCAACTTGTATACTTCCATGAATTTCAGGCTCACATAGA
ACAGGAACACCTTTTGCATTCTTGAGCAATAGTTCCTCTTCTTTGAAGTA
TCCACTTTTAGCTCGGTGATACCCTAAACAACGCGTGTATCCACGAGGGC
CGCCCAAAACTTTTTTTAAGTTATGAGGTTCCAGACCCAAGTGTTGTAAA
CGAAGTTCTTCGTCTTCATTGACACCGAGAACATGATCAATTGATAATTT
GACAATGTTAAAGTTCTTTAAGTCATGTTCTTTATCCGTATCCTCATTTT
TCTTGGATATTAAAAGTGCTCCCGTATCACCCGCATTGGCAATAAAGAGT
CGAGAATCATCAAGAAGAACTCCTATTGTAGCTGAAGAGCCCGAATCGGA
TGAAAAAGACTCTGGAGATGTTTTTTTGTTATGAGCTATAAAATAATGTA
AAATATATTAGGAAAGTGTGCGATAGTTGGATTGGTGATTTATTTAAATT
ATTACTTAATGCACGGGCAAGAGACTCATTTAAGGACTCGAAATAATCTC
TATCTGAGGAGATGAATGCAGCCTTTAGAACTTCCTTGATAGACTCATCA
GAGGTGCTTGGATCTATTTGTCCTAAACAGACCTCTGCTGGCATTTTCTT
GGAGGCAAAATCCGACATCTTGCATCCAGAAAATCCATCCAGGACGCCCA
AAGAAATAAATACATTTTTATTTTTATGATGACTTCACCTCTCAAAGAAG
ACTCAAGAGATAAACTAGATTCGAAATGAAAATGTAAAATCCTACAAATG
ACACTATGTAAAAATCAATGATGTTAATGAATTAATGCTAATTAGTAATT
AATGAGATGAAGTCATCCATAAAATGCCCAAACCGAAGAAGCTCATTCCA
GTGAGTCTAAAATGAA back to top
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