EMLSAT00000002344, EMLSAT00000002344-698191 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002344
Unique Name	EMLSAT00000002344-698191
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1446	supercontig	LSalAtl2s1446:1051..10318 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002344 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002344	EMLSAG00000002344-685110	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010385	EMLSAE00000010385-719313	Lepeophtheirus salmonis	exon
EMLSAE00000010386	EMLSAE00000010386-719314	Lepeophtheirus salmonis	exon
EMLSAE00000010387	EMLSAE00000010387-719315	Lepeophtheirus salmonis	exon
EMLSAE00000010388	EMLSAE00000010388-719316	Lepeophtheirus salmonis	exon
EMLSAE00000010389	EMLSAE00000010389-719317	Lepeophtheirus salmonis	exon
EMLSAE00000010390	EMLSAE00000010390-719318	Lepeophtheirus salmonis	exon
EMLSAE00000010391	EMLSAE00000010391-719319	Lepeophtheirus salmonis	exon
EMLSAE00000010392	EMLSAE00000010392-719320	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768656	auto768656	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002344	EMLSAP00000002344	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1446:1051..10318+

protein sequence of EMLSAP00000002344

>EMLSAP00000002344 ID=EMLSAP00000002344|Name=EMLSAP00000002344|organism=Lepeophtheirus salmonis|type=polypeptide|length=170bp
MYRFDLCGHLVCHHECLKLLMSTSEFPLVCPREECDVGITVQDMCVAFNI
GNKNYSHCPTINCGGVYKITNESTNKLTCLECFKDICTRCKVEYHEYLTC
EMFQRGEKNDLEELRQKGVLKPCPKCKAPIEKNGGCSTVICKCGTGFNFY
GTENYLSEPAVYNPICPVPR

mRNA from alignment at LSalAtl2s1446:1051..10318+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002344-698191 ID=EMLSAT00000002344-698191|Name=EMLSAT00000002344|organism=Lepeophtheirus salmonis|type=mRNA|length=9268bp|location=Sequence derived from alignment at LSalAtl2s1446:1051..10318+ (Lepeophtheirus salmonis)
AAATTATTTAAGTAAGTCCAGTTTTAAATTATATCTTAATTAATGCAAAA
ATAACTTGATAGACACAATTAACTTCTTTTGAGTTTATTTTGTAATTAAA
CAAATCGTAGATTGACAAATTATGTGATCCGTGTGACTAAATAATATATC
TATCATAGATCGGACTGTAAATTTGATCCAAGAGAGCGAAACACAAGAGT
GGAAGTTTTCAAAAAACAATTGTCATTTCCTTTGAAGCAGGATGATTTAT
GGAATGAGGAGGAGTGCTCTTCATTACTCCAAGGTAAGGTGGATATAATC
TATAAAGAGCCATTAGTAGATCAACAAAAAAGTGACCAAAAACGTCTGTT
CGCTTAAGCATGAAAAAAGAATTCCCTTTCAAAATGTCACTTTTGGAGAT
ACCACAAATAACCTCTCACTTCCAATGGCACTGCTAGGACAGATAATATT
CTTAATTATATAAAGGAGTACTTATTATTTATAACAAATAAGTTAATTTA
CAAACTGACTAAATTTCTAGATCAGTGGTTCCTAACCAGGGATCATCGGA
GCTCTTATGGTCCGAGGAACATCCTCAAGGGCTCTGAATGATGACATGAA
CTATAAATGCATCATTCATAAAAATATGTTTGACCAAAAAATGTTATAGA
GCTTCAAAGTGATGAAAAGGTTGGGAATCGTTGTAGTAGATACATGATTT
CATCTTGCTATACYTTAGACTGATTTGATTTTTCGACATTATTCGAATAT
GCAATAAATCGATTAATTGCGCGATAAATTTAAATGAGAGATAATTTTTT
ACCGTCTACAATAAATTCCATCCGCACCCTTTAAAGTAACTGGATATCAA
ATGTTTTTAATCCGGTGTTGGTATTTCTTACTCGGAATCTGCAAGACTAA
AGAAGCTACAGATTTGTATATGGCCTGTTGAATCATCTGCTTTCAGTCAT
ATTTTGTTGTTAGTTTGCACTTTTTGTTACACAAATGTCCTTATTGGTAG
TTTTGCCTGTATGTCTGAGCCTAATGCTTATTATTTGTTGAAGTGCAATC
TGCTTACATCCTATTTATTTAGTGTTTAAATTGTATTTTTTGTTTTTGGT
TGTGCTTGATCTTTATTCAAGAACAATTTTGGTGTAGATAATTTTATTTA
TTGTTTTTGAAGGTTTTGTTAATTGATTATGGATATTTTCAATGTCTTCC
AGATGTCCAGTTCCAGTGATCTCTAAAAATAAAAGTTTATTGATCTTGGG
AAGGGTGTACTTCGGTTATTATGCCATTATCATTACGTAAGTTCAAAATG
GTATCATAACGGCAATATTATTGCTTATCGCAATAATTTATTGGTCTATT
AATCAAACAGACAAATGTGTTATCGTGACAGGCCTAATGCCATCTTTAGG
TAGCACATCTTTTTCAAAGTTTGAAAGGAGAAGAAAGTTATTTATTTTCC
CCAATAAGGATTAAAATGCAGCATTAATAATTATGATAGACATTATTGCA
ACCCTATCAAAAACATAAACAAAGATAGAGTAACAAAAGAAAATTCTGAA
CTTTCCTTTCTGAAAATGTAAAAAAAACAACGATGTGCGCTATGGGGGGA
TTATCAAATTTTCCTAACTTTTTTCCCTTTTTTGTACCACTTTAGAAAAA
AAAACAAATAACTTTTCAAATACTTTCTATAATTTGAAAAAATGTCTTAG
TATCTATATTGACTCAGTAAAAAGTTTTTGTGTTTTTTTATATTTTGATC
AAGATGAATCTTGAAAGACAATGCATAGGTCATTTTCATATCCTGTGACA
CATTTTCCGCACTAGCCGTAATCGAAATCCGTGATAAGTTTTACAATAAA
ACCGTTCTACTGTACGTGAATAAATTGAGATTAGAAAGATAATTGTTCCC
AACCATAAATACTCTTGGCAAGTATAGCGGTAGGATTATTTTTCATCAAA
TGAATGTCCTAATCTAATTAATAGTTGCTTTAAGAGTTTGTATGTTTGAA
AACAATTACAAACAACGTAGGGATTTTCTTCTAATCAATGATTGTATCAA
CCTGGAAAAAAGAGCCATGGCTAAAACTGCTGAAGATCAGTTTACTATTT
TATAAATAGCTCATATGAATTGGTTTTTTTACAATTGAGGAAAATTATAG
ATATTTTGGTACTTGTGATTCTTCTCTGTTTTTAAATGCATTGTATTCTC
TTTTCACATGAAATACCCGTGTTTAAGAAGGACCCTCAAATTAAAAAACT
CATAAAATTAGACATTAATTGGATTAAGTTTCCTCTTTTTCCGTAAAAAG
TTCGCTAGCTAGGGGGAAAAAATGTGAAACGCTGTTGTGACTTTATTTCT
TTACTGATTTTATTAAAATTTTGACAAAAATCAACATTATAACATAAATT
TGACATTCAATCAATAAAATTGCTGTTAMCTTGGACCATACGTTCACAAC
GTACTCTGAAACGACGTACTTTTTATTGACCGTCCCACTACGTAAAGTCC
TGAATACCCTCCCTATCACATCTCTTCAGGAATATTGTGGTGATGTGATT
GAAAATCTGTTCAAAATTCCCACCGTCAAAATAATCTAAAGGGTTCAAGT
CCGGCGATTTAGTGGGCCAAGACCTCAGGGGGCGTACATCTCATTCTCAG
AATCAAGAAAATTTAGTGTTCTGTTGCTAGTGTGACAGGGTGCTCCGTCT
TGATACCAGATTCAAAGTCGGTCTTTCATGATGCTGCGGATTCAGGGAAA
GACTTTGGTGTGCAGAACACTGATGTAGACCTTCAGGCCCTGCTTGAAGA
TGAAGGCTGCAACGTGACTTAAGCTGCTAACAACGCCAAGAACCATAACT
TACTGTTGGTACTTGACTTTCATGATCCTTGGGACGTTATAAGATTTTTT
TCCTCAACCATCTATTGTTCCACGAGTTATGATTCTGGGTTTGACATAAA
TGTTTCTCATCTAAGAAGAACCAGATATGATCTTTGACGAGAGGTGTCTG
TTTTAGCTTGATCAAAGCCTTGTTTCGGTAACCCTTTTTGTCCCTGTTTG
ATGGGGTCAGAAGCTGTCTCTTGCAAAATACATAGCTTTAGTACCGTAGG
TATTCATTGATCACACGATGGACAGTTAAATAGAGCGCTACGTCGACGCT
GTCAGGGTTCTTCTCATTTTTTTGTTTATTTTCCTCAAGAAAGTAGGACT
TCGGACGATTTTGGCCACTTGCAGTTGAAAAAGATTTTTGGGGAATCAAC
CTCAGTGTGTCCTCACCAACCTACTTGACACGTTTTCTGAATTTTTTGAT
AGGAATCGAGTAGTGCACCCGACCGCTTTAGCCAAAAACGTGTTACGTGT
TGTCTACTTTCCCTTTCAAATTGTACAAAGAACAAAAAAGTGCACAACGT
TTTAGTTCCTGATTAAAAGTAGACGGCGGTAAATTTAATCGTAAGGAAGC
ATTATGAGCAACTGAAGTGGTAGAGTGATATTCGTACCGGACCTACTCTC
TATTAGTGTGTGCTTGTATTAAAACCGGTTCATAGGCGATGGGATGAGGC
TAAAGAAAAATGCGAACTTTTAAAACAACTACCCTTTATTTATTTTATTC
ATATGTAATTATTTATTTTCTTTCTCTGCTATATTCAGGTGTCCCCTTTA
GCAGAGCAGATGTCCCTGTTTTGTTTCATTGTTATTCACACAAAGAAGAT
TTAGGAACAATTGAAAAAAACTGCGAAGTTGCTATAGTCGAAAACACTGT
TTCTAAAGATTACTCCCTTCGAATTTTTGGTTATCCAAGTGCTACTGAGA
AGGCAATAGAAGAAATTGAAAGGTCTATGATTAATCCTTACTATTTGAAT
TATAATTTACATTATTATACACTATTTACAGATGTTTGGATAATCTGCAG
ATCATCAACACTGATATCTCTTTTGATAAGTGCAAAGGCCGGGCTGGGGT
ACTGCTTCAGTTCCTCAAAATATATGGAACAAATCTATTCAAACTTAAAA
ATAACAAAGGAATTACTTCTGTTGATATTAAATTGTCAGAGAGNGAAAGT
TTGAAAGAAAATAAAAGTTATTTATTTGGACAATAAGGATTAAAATACAG
CTTTAATAATTATTTTTCATTGATTAATTATGATAAATATTATTGCAACC
TATAAAAAACATTAATAAATATAGAATAACATATGAAATTTGTTATCCTT
TTAAAAATGTAAAATAAATGGATGTGCGCTATACGCGGATCATCTAATGT
TTCTAACTTTTTTCTCTTTTGTTTTTGTACCATAGGTTAATTTTAGAAAA
AAAACTTTTTTAACACTTTTTATAGGTACAAAAATTTATATCAAAATAAT
CTAATGCAAAATGACTAAAAATTTATATCAAAATCATTTAATGCAAAATG
ACTAAAAATTTACTCTTAGTATCTATATTGATCAATTGAAAGTTTTTGCC
TTTTGTCATAATTTGATTGAGATATGCAACCTAATGATTACCTGGTAGGA
CCATGTATAGGTCATTTTCATACCATATGATAACTTTTCCGCACTAGCCG
TCATCGAAATTGGAAAAAAGTTGAAAATAAAACCACTCTCCTGTACACAC
GTACAGGAGATTTGTTCTCTCGCCTATAAATACTATTGACAAGGATAGCG
GTAGGATCATTCTTCATCGAATAAAAGTATCTTAGTCTAATTAATAGTTA
CTTTATGAGTTTTTATGTAAATTAAAGTAAACAAGTTATTTATTCCAAAA
AGTCATGATAATATATAGTTATCGAACAAATAGCTGCCTGCGATTGCATT
CATCGATTGGGCGGGATTTTTTTTGTAAATTTGACCTTAACAAACAAGGA
CTTTGGACAATTTTGGCCCCTTCTGGGCCACAAAACTTTCTGAAAATCAT
TATCAGTGGGTCCTCACCGTCTTGCTTGACATGTTTTCTGAATTTTAGTA
CGAATTGACTAGTCCAACCGATTGCTTTAGCCAAAAACGTGTTGTCTATT
TTAGCATGTAAATTACAAAAAATACACAAAAGTGTACAACGTTTTTGTTC
CTAATTAAAAGAAGATCAGGGTATGTTGTCGTACGGAAGTATAATAAGTA
ACATTTGTACCGTACTTAATTTCTATTAGTGTGTGTATATAGCGTGATGG
TAGGGGGCAAAAGAAAATTGTGAACGTTTAAAATAACTACCCTTTATCGA
TTATATTAATATGCAATTATACATTTCCCCCCTGCTGTATACAGGTGTTC
CCTTCAGCAGAGCAGAAGTCCCTGTTTTGTTTCATTGTTATTCCCACCAA
GAAAATTTAGGAAAAGTAGAAAAAAACTGCCAGGTTGCTATTGTGGAAGA
CATTATTTCACAAGATTACTCCCTTCGAATTTTTGGATATCCAAGTGCTA
CTGAGAAGGCAATAGAAGAAATTGAAAGGTCTATGATTAATCCTTACTAT
TTGAATTATAATTTACATGATTATACACTATTTACAGATGTTTGGATAAT
CTGCAGATCATCAACACTGATATCTCTTTTGATAAGTGCAAAGGCCGGGC
TGGGGTACTGCTTCAGTTCCTCAAAATATATGGAACAAATCTATTCAAAC
TTAAAAATAAAAAAGGAATTACTTCTGTTGATATTAAATTGTCAGAGAAN
AGTTATACGTATCTGTGGGGAGAAACAAGTTATACCAAAGGTAGGTGTCA
GGTGATTATTAGACTATTATAATTGAATTTGAAATATATGTAGATTGAAG
CTGAAATTCAAAAAGTGATAGATAATTGTCCAGACATTGAAAATATTGAT
GAAGACGATGTTTGCAGTATTTGCTACCTTGTTCCTGAAAGAAATGACAT
GTATAGATTTGACTTGTGTGGACATCTTGTGTGTCATCACGAATGTTTGA
AATTGCTAATGTCTACTTCCGAATTCCCTTTGGTTTGTCCAAGGGAAGAA
TGTGACGTTGGTATAACGGTTCAAGATATGTGTGTTGCTTTTAACATTGG
AAATAAGGTCAAAAGGGNCATTTGCGCAAAACTGTTTTAATCATTTCATG
GCGAACAATACACAGAATTATTCTCATTGCCCTACAATCAATTGTGGTGG
TGTTTACAAAATCACAAATGAATCTACAAATAAACTAACATGTTTAGAGT
GCTTTAAGGATATCTGTACCAGGTATGTGAATTGTTCCAATGGTAAATAT
TATGTTGTACGTATATATATAATATATGTCCCAGCAAACATTTTGTTGGT
ATATAGCGAGCCATATTCAAGTTATGAGTTGGCATGTCTGTATAGCGGTT
TTACACTTGCTGATGCTTTTGTTTGATAATTATTTTTATCGGGGTCTCAA
AAATTAGTTTTTAAAAATGAATCGACCGTGTTTTTAATTTACAAATAATA
TGAATCGACTCCAAAAAAAGCCATATTAGTTGAGGCCCCTACTTAGAGTT
ATATAAAATATAACCTGCCCGTATGTAAAGATAAACAAATAAACCTTTAC
AATTTGCAGAATGTTTGGGTGTAGAGCAGCTAGGCATTTATGACGTTCCA
TAAGATTAGCTACAGAAAGGAAATTAATACAAATTCCTCCCTGTATCTTA
CAAGGACATAGCAAGAATGACTCGTATGTCGATTCTCAATTCCATTCCAG
CGAGGTTTTACACTTATAACCAAGGCTCGACTTGGCTAGTAAAAATCCAG
TCGGGCTATTACCAGGTGTCCTTTATCTAGCCCGTTTAGCCAAGTYCCTT
AAATATCGCATATACATAGGTAATTTTGGTCTCAAATCTGGAGTATTAAC
TTGTGTCAACGTCTCATACGTCCAATAAACATTTAAAACATATATTATGG
ATAAAATTACTCACCAAAACTGGAGGTGGTTCGGTCTAGGTCCAAGCTCG
AATCCCCACCGTCGAACCTCATTTTACCAAGCCCGAACCTTCCAGACATA
CATTTATTTATCATGTAAAATAATTACTTTCTAACTAATTGTTGACGCCA
TCTTTGATTTGATACCTTATGAAAAATAAGTTGACGATGAGGTTATTGAT
TATTTGTAAGTGTTACACTTACATATGAGAAGAGATGGGTATTTCCGCAA
CTTCAACTCTCTTCTAGATTGGTTTAAAGACAAATTTTCAGGGAAGAAAG
TAGCAAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATACAAAAAATTACTTCGACATTCCATTAGAGCCTAATAACTTGAAAT
CCTCTTCAGGGGTGACTCTATAAAAGACAAAATAATTTTTTTTTGAAAAC
AATAGCTATTCACAAAATATTTCTAAAATTTCATTTTTGGAAAAAAAATT
TCAAAATTTCCAGTATTAAATTTTTTTAGAAAAAATCTATAGCTAATTAA
AAAAATTGATTTTTTTGGAAAAAAAATTAGTAAATGAAATTTCAAATATT
AAACTTTCGGGGAAAAAATTTAATAAATTCACAGCATTCTCAAAAAATTA
TTATTTTTTTCTTTTAATTGCAAAAATTCAAAACAATTCACAAAAAGTAA
AAATTTTTGAGACTAAATTTTATATATTTCAATTATTGTAAAAAAAAATT
CAAAAATTCCCTGCTGTTCACAAAAAATTTCAAAACTCCATAGCAATTCA
CAAAAAAAATTTATAAAATCTCTGGCTGTTATCAAAAAAAAATTACCTCT
ATTTTCACATAAAAAATTTTCATCCTCAGCAAAAAAAATTCTCGTAAGAA
GAAAAAAAAATCTTTATTTTTTTTGGGGGGGGGGGAGAGGGGKACAGCCC
CTCCAGCCCACCACTTACCGACGCCTCCGGATTTATCTTCATTTTTGGAT
CTTTTAATTGCTCTCAGCCCATTTGATGATAKCTATGCTGGTCTTCTCCA
TAACATTCTTCAAATTGTCAGGATTACCATGTTATTTGTCGGTCAAGTTT
TATACAACTCAAACTCTAGCCCTACTTTTTTGAAAGGCATTTGTATTTTT
TTAATATTTCTCATTTCTAAATTATTCAATTATATGTAATTTATTAGGTG
TAAAGTCGAATATCATGAGTACCTAACCTGTGAGATGTTCCAAAGAGGTG
AAAAAAATGATCTAGAGGTAAGGAGGAGTTAAGTTATTAATTAATGAGTA
AAACATTTTTATATCTGTATTTATGATACTACTCAGGAATTGAGACAAAA
AGGCGTATTAAAACCTTGCCCTAAATGTAAAGCTCCTATTGAGAAGAACG
GAGGTTGCTCAACAGTAATTTGTAAATGCGGTACAGGTTTTAACTTTTAT
GGAACGGAAAACTATCTATCCGAACCAGCTGTGTATAACCCGATTTGTCC
TGTACCAAGATGATGCTTTAAAAAAATTATATATATCATTGATGTTTTTG
TAGAAGTTTGGCTCAATGATATGAATATAATGAAAACTCCAATTTTATTA
AATGAAATCTTTTATCAAAGTATGTACATTATTTAATATGTTACTAGTCG
CGTAACGCAAATAATTTCAAGATGTTTTTTGTATTTATCCATCATTATTA
AATAAGCTCCAATTTTAGAAATATTGAAGAGAAAGTGTCAAAATTCTAAT
TATGTAATAATAATAATAATAAAAAAAGACACCATTATAACGACAAAATA
TTTTGTTTATTTGATCCA

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