EMLSAT00000002399, EMLSAT00000002399-698246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002399
Unique NameEMLSAT00000002399-698246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s145supercontigLSalAtl2s145:1549404..1550032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002399EMLSAG00000002399-685165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010602EMLSAE00000010602-719530Lepeophtheirus salmonisexon
EMLSAE00000010603EMLSAE00000010603-719531Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780816auto780816Lepeophtheirus salmonispolypeptide
EMLSAP00000002399EMLSAP00000002399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002399

>EMLSAP00000002399 ID=EMLSAP00000002399|Name=EMLSAP00000002399|organism=Lepeophtheirus salmonis|type=polypeptide|length=189bp
MSKMGKAAKQAATNVSRIRIVTHIPAQMASPGPPLGSQLGELGVNIASFI
KDFNLKTSIFKAGVPIPCKITLNADRSHNLVMAHPPFEYFLKQAAGISRG
AMKNEIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIK
IVDHLDPEEYDVFLKDASKVVEEQLAEIKAIKEAKLLRQ
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mRNA from alignment at LSalAtl2s145:1549404..1550032-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002399-698246 ID=EMLSAT00000002399-698246|Name=EMLSAT00000002399|organism=Lepeophtheirus salmonis|type=mRNA|length=629bp|location=Sequence derived from alignment at LSalAtl2s145:1549404..1550032- (Lepeophtheirus salmonis)
ATGTCTAAAATGGGTAAAGCAGCTAAACAAGCTGCGACTAATGTATCACG
AATACGTATTGTAACTCATATTCCTGCTCAAATGGCAAGCCCAGGTCCTC
CACTTGGATCTCAGTTAGGAGAAGTATGCATTCTATTAATTTAATGGTTT
AAATATTGATACATTATGTGGGTTCTTTTAAGTTGGGTGTCAACATTGCA
TCATTTATTAAAGACTTTAACTTGAAGACAAGCATTTTCAAAGCAGGAGT
CCCCATTCCGTGTAAAATCACCCTTAACGCTGATCGAAGTCATAACTTAG
TGATGGCTCATCCTCCATTCGAATATTTCCTTAAGCAAGCAGCAGGGATT
TCAAGGGGTGCAATGAAAAATGAAATTGTTGGTATGGTTACGCGAAAGCA
TGTCTACGAGATTGCCAAACTCAAATCTGAGGATCCTCTGCTGCAAATGA
TTGACTTACAAGAAATTGTTCAAAGGATTTGTGTTTCTGCTCGTAGAGTA
GGTATTAAAATCGTAGATCATCTGGATCCTGAAGAATATGACGTATTTCT
TAAAGATGCTTCTAAGGTGGTCGAAGAACAGCTCGCTGAAATCAAAGCCA
TTAAAGAAGCTAAACTATTGCGTCAATAG
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