EMLSAT00000002400, EMLSAT00000002400-698247 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002400
Unique NameEMLSAT00000002400-698247
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s145supercontigLSalAtl2s145:1552795..1553691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002400 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002400EMLSAG00000002400-685166Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010604EMLSAE00000010604-719532Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780817auto780817Lepeophtheirus salmonispolypeptide
EMLSAP00000002400EMLSAP00000002400Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002400

>EMLSAP00000002400 ID=EMLSAP00000002400|Name=EMLSAP00000002400|organism=Lepeophtheirus salmonis|type=polypeptide|length=298bp
MGSHEQLCLKWNDFESSIKTGFSKLRKQKEFFDVTIASNGRFMKAHKVIL
SACSPFFHQIIKNIPHDHPFIYLRDIKAEHLESLLCFMYDGEVNVSQNEL
ENFLSVAEELQIHGLSQKVSASEPDLKKRKLNRISTKYNPEVLKSSPSSH
KGKVSEEKDSITLYDEEIVPDDEYIEEEHENFLPNDSKIIKFHYDTPSGE
GNSSTSSQSFEKNKSLNKNELDIAIDKLICKSPNGHIYCTRCDYSTALQR
SIRDHIEAKHIVTDGFECDQCSLRCKTRASLRRHHYRRHPKISNDFII
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mRNA from alignment at LSalAtl2s145:1552795..1553691+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002400-698247 ID=EMLSAT00000002400-698247|Name=EMLSAT00000002400|organism=Lepeophtheirus salmonis|type=mRNA|length=897bp|location=Sequence derived from alignment at LSalAtl2s145:1552795..1553691+ (Lepeophtheirus salmonis)
ATGGGCTCTCACGAGCAACTTTGTCTCAAATGGAATGATTTTGAATCCAG
TATTAAGACAGGTTTTTCAAAGCTTCGTAAACAAAAAGAGTTTTTTGATG
TTACCATCGCAAGTAACGGTCGGTTTATGAAAGCTCACAAAGTGATACTC
AGCGCATGTTCACCCTTTTTCCATCAAATAATTAAGAATATCCCTCACGA
TCATCCCTTCATTTATTTACGTGACATTAAGGCCGAACATCTTGAGTCAC
TCCTCTGTTTTATGTATGATGGAGAGGTGAATGTTTCACAAAATGAATTA
GAGAACTTTCTTTCAGTGGCAGAAGAGCTACAAATACATGGGCTATCTCA
GAAAGTCAGTGCAAGTGAGCCAGATTTAAAGAAGCGTAAATTAAACAGAA
TCTCTACTAAATACAATCCAGAGGTCCTGAAATCCTCACCGTCAAGTCAT
AAAGGCAAAGTGAGTGAAGAAAAGGATAGTATTACTCTCTATGACGAAGA
GATTGTTCCTGATGATGAATATATTGAAGAGGAGCACGAAAATTTCCTCC
CAAATGATAGCAAGATTATAAAATTCCATTACGATACTCCTAGTGGCGAA
GGGAATTCATCCACATCATCTCAGTCTTTCGAAAAAAATAAATCTTTGAA
CAAGAATGAATTAGATATTGCTATTGACAAACTCATTTGCAAAAGTCCAA
ACGGTCATATTTATTGTACTCGGTGTGATTATTCTACAGCTCTTCAAAGA
AGTATTCGAGATCATATAGAAGCTAAGCACATTGTTACAGATGGTTTTGA
GTGTGATCAATGCAGTTTACGATGTAAAACAAGAGCAAGTCTTAGGCGAC
ATCACTATCGACGACATCCTAAAATTAGTAATGATTTCATAATATAA
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