EMLSAT00000002455, EMLSAT00000002455-698302 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002455
Unique NameEMLSAT00000002455-698302
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1471supercontigLSalAtl2s1471:52173..56863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002455 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002455EMLSAG00000002455-685221Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010899EMLSAE00000010899-719827Lepeophtheirus salmonisexon
EMLSAE00000010900EMLSAE00000010900-719828Lepeophtheirus salmonisexon
EMLSAE00000010901EMLSAE00000010901-719829Lepeophtheirus salmonisexon
EMLSAE00000010902EMLSAE00000010902-719830Lepeophtheirus salmonisexon
EMLSAE00000010903EMLSAE00000010903-719831Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770758auto770758Lepeophtheirus salmonispolypeptide
EMLSAP00000002455EMLSAP00000002455Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002455

>EMLSAP00000002455 ID=EMLSAP00000002455|Name=EMLSAP00000002455|organism=Lepeophtheirus salmonis|type=polypeptide|length=590bp
MSGNQQPQQYCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGLQLKAHK
MVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQ
ENLSSLLKVAEGLKIKGLAEVQECKESKQSPVHIPPPSSSSPSVSSAGIT
GGSTNSLSGAAGYLSALTGLTGLLSPDHLVPHLTSPLKRMASSPLVNPPP
PPPPNPPSSSASNFSLGPKRKRGRPRRLSGSEAVPLASGLSDAEINDENR
CESKNHKELPERSESTPPDCKSQDFTSEADSIDGRSSVHGSTIRPLKKRQ
YLDDRSSGEFDRESNGSPGGSSSSSSYQLPNSTTEIDQPENLSLKKSDLL
NRTNLSLHNTPPPSSDEETTISMNAKQIISPPGMDMKKFWEERLANGLYG
SGGLCDPESSIHGKLSGASAALLSAAERSSSYLASIQLHEAEIAAAIYSK
QQQQAAQAAINSSQNAGPSSPVKSENGGNVNPISIRSFCIQEGNTYRCKV
CNNAYTQPSNFHRHYVTTHLNRKSYPCTVCSKKFNRKDNMTAHLRAVHGW
GGSLSSNGSSASSLPGSPAPPSSAVSMTVPKQEPSPTIVN
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mRNA from alignment at LSalAtl2s1471:52173..56863+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002455-698302 ID=EMLSAT00000002455-698302|Name=EMLSAT00000002455|organism=Lepeophtheirus salmonis|type=mRNA|length=4691bp|location=Sequence derived from alignment at LSalAtl2s1471:52173..56863+ (Lepeophtheirus salmonis)
ATGTTGCTTTTTTTACCTGCCTTAAGGCATTTTAAAGGGCCTAACAACAT ATGTTGTGATGATGTTGTAGTCCATGGTGATGAATAAGAATCTCTCCGCA CTCGGCGTGCCCGTGTCTAGGATTTTTTTAAATATTTTTTTGTTGTCTGA ATTATATAATAATATTCCACCATCATACGACAGTTTCAAATCCAGACATG TGGAAGTGAGAACCTCTCTTCTTCTTGTTCTTCTACTCATTCTCTAAAAC ATTTTATTAAACTCAAAGTTACCAACCCGCAAACTGTCTTAGTCAAGATT AAGTCAACAAATTATTACTTATAATATAATTATATGAGCAACAACAATCA GTGGAATCAAATTCCCTTAAAAACAATCCATCCATTCTGTACTTGGGAGC AGCATACTACTCCTTATCCAAATTATCTGTAAGTTATACCAACTCCAAAT GCCATTCATTTTATGTTGCACCAAGTACTGCATTTTCTACAAAGGGACCT TCCTTTGCATTGCCAAATTCTATCAAGGGGACATACATACATTCTTTGCC TACTCCTTCTTCTCCTCTTCGTTCAGAATGAGTTACTTTAGGGGGGGGGG CCTCCATTACGTAATCAGGCACGACCGGTTTATCCTTTCTTAGCCATAGT GTATAAGTTAAAGAAATATAACATTTTACCTGAGTTGAATGTACGTTTTT TCGTTGCTTTTTTTTGCTCAAAAATTCCCTTCGCCATCATTATCATCCTG GATGTGGTTTCCCGCATACTATCACAGGTGTATCTACATATATTTATATT ATATAGCCTACTCCCCTTCTCTTGAATGTGTAAGTCAAAAAACCCATTTG AGTAAAGGGTTAAAAAATACCCTAACAGAGGGAAGAGGGTTGTAAAAAGA ACATACATATTTATTTTTTTAAGGCAACAATTCCAGGTAGAAATTATTAT ATGTTATTTATTTCATATTTCTTATGAAAATTGCTTTTTTTTTTGTTCAC GTAGTAATGCTTTGTTTTTTTTTCTTATTGTTTTTTAGGTCTGAATAATT TTAAAAATTGATGGAGATAATTGGAGAGAAGTAAAAACTGCATAGTAATA ATAAAAGCCCCTATTTGATCCCTTCCAAAACTCCTACATTTAAATACTTC ATACCTACTACCTAAAGTACCAAATAAGTACAGTCATCATACGAAACTAA TAAGAACAAATAAAAAATAAAAAACATGTCTGGAAATCAACAACCTCAAC AGTACTGCCTCCGTTGGAATAATCACCAACACAACTTACTCTCTGTGTTT GAGGATTTATTAAATCATGAAGCTTTTGTGGATGTGACGCTTGCAGTGGA GGGACTTCAGTTGAAAGCCCATAAAATGGTTCTATCAGCCTGTTCCCCCT ATTTTCAAAGTATGCTCTACAACACGCCTGACCGTCATCCTATTGTGTTC CTTCGAGATGTTCGTTATAGTGAGATGAAGGCTCTTCTTGAATTCATGTA TCGAGGAGAAGTGAGTGTGGATCAGGAGAACCTGAGTTCCCTCCTCAAAG TGGCAGAAGGACTCAAGATTAAGGGATTAGCCGAAGTTCAGGAATGTAAA GAATCCAAGCAGTCTCCTGTCCATATTCCACCTCCTTCATCCTCTTCTCC TTCAGTATCTTCTGCTGGCATAACAGGGGGCTCAACAAATTCCTTGTCTG GTGCTGCGGGATATTTGAGTGCACTCACGGGTCTCACTGGACTTTTATCC CCAGATCATCTCGTTCCACATCTAACATCACCTCTTAAAAGAATGGCATC ATCMCCCCTCGTGAATCCMCCCCCGCCACCTCCTCCAAATCCCCCGTCCA GCAGTGCATCCAACTTCTCTTTGGGACCTAAAAGAAAACGTGGCAGACCC CGTAGACTATCAGGGAGCGAAGCCGTTCCTCTTGCATCAGGACTCTCTGA TGCTGAAATCAACGATGAAAATCGGTGTGAATCCAAGAACCATAAGGTGA GAAGATAGGCTCAGTTGTTCTATTTGACATCTCTAAACAATTTCTTTCTT TCTTTCTTTTTCATTAGGAATTACCGGAGAGAAGTGAATCCACGCCACCA GGTAATAATCACGCTTATCCTAAATTCTCTTAAATACCTCTCAATCCCTC ATTCTAATTGAATTTTTTTATCTCACTTTCTTTTTATGTAAGCAGATTGT AAGTCACAAGACTTTACATCTGAGGCAGACAGCATTGACGGAAGAAGTTC AGGTGAGTCATTTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTAAGCTTCAAAYACAGGGAAACAAACTAATTTTGTTAATACTTTTTCCC CTAATTTTCTCTCTCTCTCTCTTTCTACTCTTATTTTTGTCTCTTCAACA AATATTATTCCTTACTAAAGAAAAGTTAATTACAATCGGGGTTACTATTC ATACAGTTCACGGAAGTACAATTCGACCTCTAAAGAAAAGGCAGTATTTG GATGACCGTAGCTCAGGCGAATTTGATAGAGAAAGCAATGGATCTCCAGG AGGTTCCTCCTCCTCTTCCTCCTATCAATTACCCAATTCAACCACAGAAA TTGATCAACCCGAAAATCTCTCTTTAAAGAAATCTGATTTATTAAATAGA ACGAATCTCTCTCTCCACAATACTCCACCTCCGTCCTCTGACGAAGAAAC AACCATATCCATGAACGCAAAGCAAATCATTTCCCCTCCCGGAATGGACA TGAAAAAGTTTTGGGAAGAGCGATTGGCCAACGGGTTATATGGAAGTGGA GGMCTCTGTGATCCAGAATCATCCATCCATGGGAAGCTAAGTGGTGCTTC AGCAGCTCTTTTATCCGCTGCAGAGCGATCTTCCTCCTATTTGGCATCTA TACAACTCCACGAGGCTGAAATTGCAGCAGCTATATATTCCAAGCAGCAA CAGCAGGCAGCACAAGCAGCTATAAACTCTTCTCAAAACGCCGGACCTTC CTCTCCTGTCAAGTCAGAGAATGGCGGAAATGTGAATCCCATCAGTATTC GTAGTTTTTGTATCCAAGAGGGCAACACATACCGATGCAAGGTCTGTAAT AATGCCTACACCCARCCCTCCAACTTCCACAGGCATTATGTAACCACTCA TCTCAATCGAAAGTCATACCCATGTACTGTCTGCTCCAAAAAGTTTAATC GCAAAGATAATATGACGGCTCATTTAAGAGCAGTCCATGGATGGGGNGGA TCCCTTAGTTCCAATGGAAGCTCAGCATCATCTCTKCCTGGATCCCCTGC TCCCCCCTCATCAGCGGTATCCATGACAGTACCTAAGCAAGAACCTTCCC CTACTATTGTCAACTAATTTAAAAAAAAAAATCAATTCTCTCAAAGCAAG AACAATAACTCTCAACCCTATAAATTGTAGTTACCACTTCTTCAATTCTT GTAATCAACTCTTTACCCATAGTTACCAACCAACCAACCAACCAACCAAT CAATTATAAGTTACCAACCAAACACTTTCTCCGCATTATAAGTAGTGTAC AAGCAATAACTTATATTAAAGTTGTTGAAACAGATAAACTTATCAAGTTA CCTATTTTATATAATCTATGTGACTCTTTAAAACGATTTTTTTGAGCCAA CACAATATTCACAAATGGCATTTCTCTTAATTTTGATGCTCAAAAAAACC CAAAGTTTTACATTAATTTTTTTCTCGAGGCATTTTTTCCCCAATATCAT ATCTTATTATTTATTCAAATTATCGTAGTCAGTTATGTTATAGTCTGAAA AGTCTGTAGACTTTACACCCCAAAAATAATATTTTTAAAAATAAAACCCA CATAAATAATCAGAAACAAAGTTTCTGAACCATTCACATAATACAAAATA AATAAAAAAACAAATCATTACATAATATTACATATACTTTAAATATATAT ATATATATATATATACCTTGGGCATCTTTCGGAAATGGACTTAAAAAACA AAATCAATCCATTTCCAAAATTGAATTTGAAAACCAAATAGTTACCAGTC CATTTTCCGAATTTCTTAATCATATTTTTTGAAAAAAAATTAAAGAATAA CACCCCTTTTTTGTATAAAATAAATTTTCTTTTCTTTTTAAACATAATTT TTGTGTGAATTTTTTTTTCTACCTTCATCACTTATATTTTTATTATTATA ATTATTATTGAGAATTTAAAAGAAATATTTAAAAAATCTGKCCAAGTCAG TGATTATCTATCCGTTCAACCAGATGAAACCCCTTGGTGCTCACGAACAC AACACGTCCTCGTCGTCCATATCAGATAAATAAATAAAATATTTTTTTGA GAAAAAAAATATAGCTTTAACAAATTTTTAAATATAATTTTTTGAATTAT TAATTCTAATGAATGTTGTTAAAAATGATGTCATAGAGGAGGACTCTATG CCTTGGAAAAGAAGAAGACAAAATAAAAACAAGTATTCTCTCTCTCTCTC TCTTGGTAGTTCCAACCCATGCTTTGTAATACTTCTTTTATTTTTTTATA TACCGATAAACTGCCAATTTTTCTGTATATTTTTACCCTGTGCCTTCTTT ACCTTCTTAGATAATATTATTTTTTAACTGGCTCGTTCTATGTATTTTAT TTACAAATATTTTAAAGAGAATTTGTATTTTTATACTCAAA
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