EMLSAT00000002455, EMLSAT00000002455-698302 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002455
Unique NameEMLSAT00000002455-698302
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1471supercontigLSalAtl2s1471:52173..56863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002455 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002455EMLSAG00000002455-685221Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010899EMLSAE00000010899-719827Lepeophtheirus salmonisexon
EMLSAE00000010900EMLSAE00000010900-719828Lepeophtheirus salmonisexon
EMLSAE00000010901EMLSAE00000010901-719829Lepeophtheirus salmonisexon
EMLSAE00000010902EMLSAE00000010902-719830Lepeophtheirus salmonisexon
EMLSAE00000010903EMLSAE00000010903-719831Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770758auto770758Lepeophtheirus salmonispolypeptide
EMLSAP00000002455EMLSAP00000002455Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002455

>EMLSAP00000002455 ID=EMLSAP00000002455|Name=EMLSAP00000002455|organism=Lepeophtheirus salmonis|type=polypeptide|length=590bp
MSGNQQPQQYCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGLQLKAHK
MVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQ
ENLSSLLKVAEGLKIKGLAEVQECKESKQSPVHIPPPSSSSPSVSSAGIT
GGSTNSLSGAAGYLSALTGLTGLLSPDHLVPHLTSPLKRMASSPLVNPPP
PPPPNPPSSSASNFSLGPKRKRGRPRRLSGSEAVPLASGLSDAEINDENR
CESKNHKELPERSESTPPDCKSQDFTSEADSIDGRSSVHGSTIRPLKKRQ
YLDDRSSGEFDRESNGSPGGSSSSSSYQLPNSTTEIDQPENLSLKKSDLL
NRTNLSLHNTPPPSSDEETTISMNAKQIISPPGMDMKKFWEERLANGLYG
SGGLCDPESSIHGKLSGASAALLSAAERSSSYLASIQLHEAEIAAAIYSK
QQQQAAQAAINSSQNAGPSSPVKSENGGNVNPISIRSFCIQEGNTYRCKV
CNNAYTQPSNFHRHYVTTHLNRKSYPCTVCSKKFNRKDNMTAHLRAVHGW
GGSLSSNGSSASSLPGSPAPPSSAVSMTVPKQEPSPTIVN
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mRNA from alignment at LSalAtl2s1471:52173..56863+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002455-698302 ID=EMLSAT00000002455-698302|Name=EMLSAT00000002455|organism=Lepeophtheirus salmonis|type=mRNA|length=4691bp|location=Sequence derived from alignment at LSalAtl2s1471:52173..56863+ (Lepeophtheirus salmonis)
ATGTTGCTTTTTTTACCTGCCTTAAGGCATTTTAAAGGGCCTAACAACAT
ATGTTGTGATGATGTTGTAGTCCATGGTGATGAATAAGAATCTCTCCGCA
CTCGGCGTGCCCGTGTCTAGGATTTTTTTAAATATTTTTTTGTTGTCTGA
ATTATATAATAATATTCCACCATCATACGACAGTTTCAAATCCAGACATG
TGGAAGTGAGAACCTCTCTTCTTCTTGTTCTTCTACTCATTCTCTAAAAC
ATTTTATTAAACTCAAAGTTACCAACCCGCAAACTGTCTTAGTCAAGATT
AAGTCAACAAATTATTACTTATAATATAATTATATGAGCAACAACAATCA
GTGGAATCAAATTCCCTTAAAAACAATCCATCCATTCTGTACTTGGGAGC
AGCATACTACTCCTTATCCAAATTATCTGTAAGTTATACCAACTCCAAAT
GCCATTCATTTTATGTTGCACCAAGTACTGCATTTTCTACAAAGGGACCT
TCCTTTGCATTGCCAAATTCTATCAAGGGGACATACATACATTCTTTGCC
TACTCCTTCTTCTCCTCTTCGTTCAGAATGAGTTACTTTAGGGGGGGGGG
CCTCCATTACGTAATCAGGCACGACCGGTTTATCCTTTCTTAGCCATAGT
GTATAAGTTAAAGAAATATAACATTTTACCTGAGTTGAATGTACGTTTTT
TCGTTGCTTTTTTTTGCTCAAAAATTCCCTTCGCCATCATTATCATCCTG
GATGTGGTTTCCCGCATACTATCACAGGTGTATCTACATATATTTATATT
ATATAGCCTACTCCCCTTCTCTTGAATGTGTAAGTCAAAAAACCCATTTG
AGTAAAGGGTTAAAAAATACCCTAACAGAGGGAAGAGGGTTGTAAAAAGA
ACATACATATTTATTTTTTTAAGGCAACAATTCCAGGTAGAAATTATTAT
ATGTTATTTATTTCATATTTCTTATGAAAATTGCTTTTTTTTTTGTTCAC
GTAGTAATGCTTTGTTTTTTTTTCTTATTGTTTTTTAGGTCTGAATAATT
TTAAAAATTGATGGAGATAATTGGAGAGAAGTAAAAACTGCATAGTAATA
ATAAAAGCCCCTATTTGATCCCTTCCAAAACTCCTACATTTAAATACTTC
ATACCTACTACCTAAAGTACCAAATAAGTACAGTCATCATACGAAACTAA
TAAGAACAAATAAAAAATAAAAAACATGTCTGGAAATCAACAACCTCAAC
AGTACTGCCTCCGTTGGAATAATCACCAACACAACTTACTCTCTGTGTTT
GAGGATTTATTAAATCATGAAGCTTTTGTGGATGTGACGCTTGCAGTGGA
GGGACTTCAGTTGAAAGCCCATAAAATGGTTCTATCAGCCTGTTCCCCCT
ATTTTCAAAGTATGCTCTACAACACGCCTGACCGTCATCCTATTGTGTTC
CTTCGAGATGTTCGTTATAGTGAGATGAAGGCTCTTCTTGAATTCATGTA
TCGAGGAGAAGTGAGTGTGGATCAGGAGAACCTGAGTTCCCTCCTCAAAG
TGGCAGAAGGACTCAAGATTAAGGGATTAGCCGAAGTTCAGGAATGTAAA
GAATCCAAGCAGTCTCCTGTCCATATTCCACCTCCTTCATCCTCTTCTCC
TTCAGTATCTTCTGCTGGCATAACAGGGGGCTCAACAAATTCCTTGTCTG
GTGCTGCGGGATATTTGAGTGCACTCACGGGTCTCACTGGACTTTTATCC
CCAGATCATCTCGTTCCACATCTAACATCACCTCTTAAAAGAATGGCATC
ATCMCCCCTCGTGAATCCMCCCCCGCCACCTCCTCCAAATCCCCCGTCCA
GCAGTGCATCCAACTTCTCTTTGGGACCTAAAAGAAAACGTGGCAGACCC
CGTAGACTATCAGGGAGCGAAGCCGTTCCTCTTGCATCAGGACTCTCTGA
TGCTGAAATCAACGATGAAAATCGGTGTGAATCCAAGAACCATAAGGTGA
GAAGATAGGCTCAGTTGTTCTATTTGACATCTCTAAACAATTTCTTTCTT
TCTTTCTTTTTCATTAGGAATTACCGGAGAGAAGTGAATCCACGCCACCA
GGTAATAATCACGCTTATCCTAAATTCTCTTAAATACCTCTCAATCCCTC
ATTCTAATTGAATTTTTTTATCTCACTTTCTTTTTATGTAAGCAGATTGT
AAGTCACAAGACTTTACATCTGAGGCAGACAGCATTGACGGAAGAAGTTC
AGGTGAGTCATTTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTAAGCTTCAAAYACAGGGAAACAAACTAATTTTGTTAATACTTTTTCCC
CTAATTTTCTCTCTCTCTCTCTTTCTACTCTTATTTTTGTCTCTTCAACA
AATATTATTCCTTACTAAAGAAAAGTTAATTACAATCGGGGTTACTATTC
ATACAGTTCACGGAAGTACAATTCGACCTCTAAAGAAAAGGCAGTATTTG
GATGACCGTAGCTCAGGCGAATTTGATAGAGAAAGCAATGGATCTCCAGG
AGGTTCCTCCTCCTCTTCCTCCTATCAATTACCCAATTCAACCACAGAAA
TTGATCAACCCGAAAATCTCTCTTTAAAGAAATCTGATTTATTAAATAGA
ACGAATCTCTCTCTCCACAATACTCCACCTCCGTCCTCTGACGAAGAAAC
AACCATATCCATGAACGCAAAGCAAATCATTTCCCCTCCCGGAATGGACA
TGAAAAAGTTTTGGGAAGAGCGATTGGCCAACGGGTTATATGGAAGTGGA
GGMCTCTGTGATCCAGAATCATCCATCCATGGGAAGCTAAGTGGTGCTTC
AGCAGCTCTTTTATCCGCTGCAGAGCGATCTTCCTCCTATTTGGCATCTA
TACAACTCCACGAGGCTGAAATTGCAGCAGCTATATATTCCAAGCAGCAA
CAGCAGGCAGCACAAGCAGCTATAAACTCTTCTCAAAACGCCGGACCTTC
CTCTCCTGTCAAGTCAGAGAATGGCGGAAATGTGAATCCCATCAGTATTC
GTAGTTTTTGTATCCAAGAGGGCAACACATACCGATGCAAGGTCTGTAAT
AATGCCTACACCCARCCCTCCAACTTCCACAGGCATTATGTAACCACTCA
TCTCAATCGAAAGTCATACCCATGTACTGTCTGCTCCAAAAAGTTTAATC
GCAAAGATAATATGACGGCTCATTTAAGAGCAGTCCATGGATGGGGNGGA
TCCCTTAGTTCCAATGGAAGCTCAGCATCATCTCTKCCTGGATCCCCTGC
TCCCCCCTCATCAGCGGTATCCATGACAGTACCTAAGCAAGAACCTTCCC
CTACTATTGTCAACTAATTTAAAAAAAAAAATCAATTCTCTCAAAGCAAG
AACAATAACTCTCAACCCTATAAATTGTAGTTACCACTTCTTCAATTCTT
GTAATCAACTCTTTACCCATAGTTACCAACCAACCAACCAACCAACCAAT
CAATTATAAGTTACCAACCAAACACTTTCTCCGCATTATAAGTAGTGTAC
AAGCAATAACTTATATTAAAGTTGTTGAAACAGATAAACTTATCAAGTTA
CCTATTTTATATAATCTATGTGACTCTTTAAAACGATTTTTTTGAGCCAA
CACAATATTCACAAATGGCATTTCTCTTAATTTTGATGCTCAAAAAAACC
CAAAGTTTTACATTAATTTTTTTCTCGAGGCATTTTTTCCCCAATATCAT
ATCTTATTATTTATTCAAATTATCGTAGTCAGTTATGTTATAGTCTGAAA
AGTCTGTAGACTTTACACCCCAAAAATAATATTTTTAAAAATAAAACCCA
CATAAATAATCAGAAACAAAGTTTCTGAACCATTCACATAATACAAAATA
AATAAAAAAACAAATCATTACATAATATTACATATACTTTAAATATATAT
ATATATATATATATACCTTGGGCATCTTTCGGAAATGGACTTAAAAAACA
AAATCAATCCATTTCCAAAATTGAATTTGAAAACCAAATAGTTACCAGTC
CATTTTCCGAATTTCTTAATCATATTTTTTGAAAAAAAATTAAAGAATAA
CACCCCTTTTTTGTATAAAATAAATTTTCTTTTCTTTTTAAACATAATTT
TTGTGTGAATTTTTTTTTCTACCTTCATCACTTATATTTTTATTATTATA
ATTATTATTGAGAATTTAAAAGAAATATTTAAAAAATCTGKCCAAGTCAG
TGATTATCTATCCGTTCAACCAGATGAAACCCCTTGGTGCTCACGAACAC
AACACGTCCTCGTCGTCCATATCAGATAAATAAATAAAATATTTTTTTGA
GAAAAAAAATATAGCTTTAACAAATTTTTAAATATAATTTTTTGAATTAT
TAATTCTAATGAATGTTGTTAAAAATGATGTCATAGAGGAGGACTCTATG
CCTTGGAAAAGAAGAAGACAAAATAAAAACAAGTATTCTCTCTCTCTCTC
TCTTGGTAGTTCCAACCCATGCTTTGTAATACTTCTTTTATTTTTTTATA
TACCGATAAACTGCCAATTTTTCTGTATATTTTTACCCTGTGCCTTCTTT
ACCTTCTTAGATAATATTATTTTTTAACTGGCTCGTTCTATGTATTTTAT
TTACAAATATTTTAAAGAGAATTTGTATTTTTATACTCAAA
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