EMLSAT00000002494, EMLSAT00000002494-698341 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002494
Unique NameEMLSAT00000002494-698341
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1489supercontigLSalAtl2s1489:15247..16434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002494 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002494EMLSAG00000002494-685260Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011086EMLSAE00000011086-720014Lepeophtheirus salmonisexon
EMLSAE00000011087EMLSAE00000011087-720015Lepeophtheirus salmonisexon
EMLSAE00000011088EMLSAE00000011088-720016Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769180auto769180Lepeophtheirus salmonispolypeptide
EMLSAP00000002494EMLSAP00000002494Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002494

>EMLSAP00000002494 ID=EMLSAP00000002494|Name=EMLSAP00000002494|organism=Lepeophtheirus salmonis|type=polypeptide|length=122bp
MKWRPLEGPVCKTKFSHTRVRLGTFTTDTTSKLDILWHNSDTLGVNSAQV
GVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFS
RLLVSTDFSESDCSRSLWFKKQ
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mRNA from alignment at LSalAtl2s1489:15247..16434+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002494-698341 ID=EMLSAT00000002494-698341|Name=EMLSAT00000002494|organism=Lepeophtheirus salmonis|type=mRNA|length=1188bp|location=Sequence derived from alignment at LSalAtl2s1489:15247..16434+ (Lepeophtheirus salmonis)
ATGAAAGTAATAAAATAAACCAGACTAACTTTCAAGATTTTCTCTCTTTT
CAATTATATCCAAACAGCAGCGATTTTCATATTCATGGGAGCATAAAGGT
TTTTCGAGCAGCTGAGCTTTCTGTAATTAATGTATGAAATGTAAACATAA
TATTAATAAAAATAATAATTCCCTGTGTTGCAAAACAAACAAAATAAGCA
CTTAATTCTTATTATCTCTTACTTGATTCTTATCATTTAGATAACCAACT
CAAAGACAGCTTTAAAAATAAATCTTATTTTAAAATTAAGTGGAGGCCCT
TAGAAGGACCGGTTTGTAAAACTAAGTTTAGCCATACAAGGGTTCGCTTA
GGCACGTTCACCACGGATACGACGAGCAAGCTGGATATCCTTTGGCATAA
TAGTGACACGCTTGGCGTGAATAGCGCACAAGTTGGTGTCTTCAAAAAGA
CCCACCAGATAAGCCTCAGAAGCCTCTTGGAGAGCCATGACAGCAGAGGA
CTGGAAACGCAAGTCAGTCTTGAAATCCTGAGCAATCTCACGAACCAGAC
GTTGAAAGGGCAATTTACGGATGAGGAGTTCAGTAGACTTTTGGTATCTA
CGGATTTCTCTGAGAGCGACTGTTCCAGGTCTGTATCTGTGGGGCTTCTT
CACTCCTCCAGTGGCAGGGGSAGATTTACGAGCTGCCTTGGTGGCGAGCT
GCTTACGGGGAGCTTTTCCTCCAGTGGATTTACGAGCTGTTTGCTTGGTA
CGGGCCATCTTCGTTAACTGAATAAAATTTGTCAACTGTTCAACTTTTTT
TACCTTCACGATGGTTAAATACTATGAAATCCGCGCGCACCCTGATATAA
GTTACCTGCTCTCAAACCCAGACCAAGCTAGAAGCAGATGCAAATAAACT
TCTTCCCCTGTCTCTTTTCTCCCTCTCCCGCCAACATTAATTTAAAAATG
GGGTTCTTCCCCTCTTTAATAATAAGGAGACAAAGTTATTATCCGGTCAT
GTATTCATAATTTTTAGCGCCATATACTCTCAGAGACATCTGCCTACAAT
ATTATGTACTTCAGTTCAAATATTTTTCTTTTATTAAATCAGAGTATCTT
TATTTTTAAAGTTATTTTTTCGCACAACTAAGAGTATGCTATTTTTTTAT
ATCAATTTTTATTGTAGCTATGGTTCAAAAAACAATAA
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