EMLSAT00000002497, EMLSAT00000002497-698344 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002497
Unique NameEMLSAT00000002497-698344
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1489supercontigLSalAtl2s1489:95104..96543 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002497 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002497EMLSAG00000002497-685263Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011092EMLSAE00000011092-720020Lepeophtheirus salmonisexon
EMLSAE00000011093EMLSAE00000011093-720021Lepeophtheirus salmonisexon
EMLSAE00000011094EMLSAE00000011094-720022Lepeophtheirus salmonisexon
EMLSAE00000011095EMLSAE00000011095-720023Lepeophtheirus salmonisexon
EMLSAE00000011096EMLSAE00000011096-720024Lepeophtheirus salmonisexon
EMLSAE00000011097EMLSAE00000011097-720025Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771985auto771985Lepeophtheirus salmonispolypeptide
EMLSAP00000002497EMLSAP00000002497Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002497

>EMLSAP00000002497 ID=EMLSAP00000002497|Name=EMLSAP00000002497|organism=Lepeophtheirus salmonis|type=polypeptide|length=344bp
MISYHSRSISSGNMRSMKVIFLIMALSALFLESNGQTKATPAQSIKTTQP
LKETPTTVITTTTTAPPTTTTAPPTTTTAPPTTXAAPTPPPKSPAPVTTT
TPKITTPTTTTTTPTTTTTTTXTTTTTTTTTTTXTTXXTTTTTTTXTTTT
TTTXXTTTTXTTTTTTTTXXXTTTTXTTTPLACGTVTGNPCIFPFIYAEN
XNYYADNTCGTVTGNPCIFPFIYAENIYVSCTTTDNGGIPWCATTLYPTX
FAHVYDTCNSACATEQTNQPNTCKTVTGRNCLPGFDYNDISYPQCTTAGD
TRAWCATSLYLGTNEALEWEYCNSACSIAPTPASTSKFLFCPRY
back to top

mRNA from alignment at LSalAtl2s1489:95104..96543+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002497-698344 ID=EMLSAT00000002497-698344|Name=EMLSAT00000002497|organism=Lepeophtheirus salmonis|type=mRNA|length=1440bp|location=Sequence derived from alignment at LSalAtl2s1489:95104..96543+ (Lepeophtheirus salmonis)
ATAAAACACAAATGAAAACTTTACATAAATATCTAATATTTCCATGATTT CATATCATTCACGAAGTATCAGCTCTGGAAACATGAGGTCTATGAAAGTT ATCTTCTTGATCATGGCTCTCTCAGCTTTGTTTCTTGAGAGCAATGGGCA AAGTATGTACAAACATAATAAAGTTTTATCATTGAAAATTAGGATACATG AAAATATTGTTAAGCTCAATTGAAAACAATATAAATAACATTTTTGTATA TACACAGCCAAAGCAACACCAGCACAGAGTATAAAAACAACTCAGCCTCT CAAAGAAACTCCTACAACTGTTATTACGACGACAACAACCGCACCTCCGA CGACAACAACTGCACCTCCGACGACAACAACCGCKCCTCCGACAACAKCA GCCGCACCTACGCCACCCCCTAAAAGTCCAGCTCCGGTAACAACTACTAC GCCAAAAATCACTACCCCAACAACTACTACGACAACCCCCACGACGACAA CTACGACAACCKCCACCACAACTACGACAACAACCACAACTACTACGKCA ACCACGKCCKCCACAACTACGACAACAACAACTKCTACGACAACAACAAC AACAACCKCTKCTACAACAACCACTNCTACAACAACCACTACAACTACSA CAKCCKCCKCCACAACAACTACGKCAACCACAACACCACTAGGTAGATAT ATATTCAATTTGTAATATGATTTTATCGATATATTTTGACTTGCAGCTTG TGGGACCGTGACGGGGAATCCTTGTATATTCCCATTCATTTATGCTGAAA ATNNNAACTACTATGCCGACAACAGTAACACCACTAGGTAGATATATATT CAAWYYGTAATATGATTTTATCGATATATTTTGACTTGCAGCTTGTGGGA CCGTGACGGGGAATCCTTGTATATTCCCATTCATTTATGCTGAAAATATT TATGTTAGCTGCACAACAACCGATAATGGTGGKATTCCTTGGTGTGCAAC AACATTATATCCAACASGCTTTGCTCATGTATACGATACCTGTAACTCTG CTTGTGCAAGTAAGTAATTTGATCGTCAATGTATAACTCAAGTTACTTTG TCTAACATTTTTTTCCTCATTTGTTACTAGCCGAACAAACAAACCAACCA AATAGTAAGATATAACTTAATTCATGACCATAAGTAATCAACTTACCCAT CAAAATATTTATCTTCTAGCATGCAAAACAGTCACAGGTCGAAATTGTCT GCCTGGGTTCGATTATAACGATATTAGTTATCCCCAGTGTACCACTGCTG GGGATACAAGGGCTTGGTGTGCCACATCATTGTACCTCGGCACCAATGAA GCTCTTGAATGGGAGTATTGTAATTCTGCATGTTCTATTGCACCTACACC GGCTTCAACAAGTAAATTTTTGTTTTGTCCGAGATACTAA
back to top
Add to Basket