EMLSAT00000002585, EMLSAT00000002585-698432 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002585
Unique NameEMLSAT00000002585-698432
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:1328805..1331947 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002585 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002585EMLSAG00000002585-685351Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011422EMLSAE00000011422-720350Lepeophtheirus salmonisexon
EMLSAE00000011423EMLSAE00000011423-720351Lepeophtheirus salmonisexon
EMLSAE00000011424EMLSAE00000011424-720352Lepeophtheirus salmonisexon
EMLSAE00000011425EMLSAE00000011425-720353Lepeophtheirus salmonisexon
EMLSAE00000011426EMLSAE00000011426-720354Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780651auto780651Lepeophtheirus salmonispolypeptide
EMLSAP00000002585EMLSAP00000002585Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002585

>EMLSAP00000002585 ID=EMLSAP00000002585|Name=EMLSAP00000002585|organism=Lepeophtheirus salmonis|type=polypeptide|length=366bp
MSHESHLMNLENRYLKQNERISPQLENSFLSSNSTKNRVLTSIQIPLHNT
FLLDLSQGNTTENVVENINGKXATDTEFQGMEIQDTKSLSSNQETEVFEE
ILDAPPEMEMYQDEYPKIEKPSLHKGFAEVPISIQKQDPAQLQKFELMQI
CTTSLLSKPKLHEPEDLIRQKILSLCEEVVFKDSVFILRLALYCRRECNF
RAGSLLLLSFASFHGNLYKTYYYDYFQKCIMTPSEWKKKSSINEDVVLSD
EDNNDDLNLPSSRSFNIKRLIRLLHIHHPQKFVMCLLGKKYPKSEDEFKK
LKLRGKFQPEKAGKRMRLQIPFTWETQVSMYFELMQICTTSLLSKPKLYE
AEDRIRKKKYLVIVRK
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mRNA from alignment at LSalAtl2s151:1328805..1331947-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002585-698432 ID=EMLSAT00000002585-698432|Name=EMLSAT00000002585|organism=Lepeophtheirus salmonis|type=mRNA|length=3143bp|location=Sequence derived from alignment at LSalAtl2s151:1328805..1331947- (Lepeophtheirus salmonis)
ATGTCACACGAGAGTCACTTGATGAATTTGGAAAATCGATACTTGAAACA
AAATGAGAGAATATCACCTCAACTTGAAAATTCCTTTCTTTCTTCCAACT
CTACAAAAAATAGAGTATTGACATCCATCCAGATTCCTCTACATAACACC
TTTCTTCTGGATCTTAGTCAAGGAAATACCACAGAGAATGTGGTGGAGAA
TATCAATGGTAAGKCTGCCACAGATACCGAGTTCCAAGGAATGGAAATTC
AAGATACTAAATCCCTCTCCTCGAATCAAGAAACTGAAGTCTTTGAGGAG
ATACTGGATGCACCACCTGAAATGGAGATGTACCAGGATGAATATCCAAA
GATAGAGAAGCCAAGTTTACACAAAGGATTTGCAGAAGTTCCAATTTCCA
TTCAAAAACAGGATCCTGCTCAACTTCAAAAGGTCTGCAATAATAATTAA
ATTAAGATTTTGTTGAATTTTAAAGCATTGCCCTTCATTTTCAGTTTGAA
CTTATGCAAATATGTACAACCTCGCTGTTATCCAAGCCCAAATTGCATGA
GCCAGAAGACCTTATACGACAAAAAATACTTAGTCTTTGTGAGGAAGTGG
TTTTTAAGGATTCCGTCTTTATTCTTAGGGTACAAATATTGAAAGTCATC
TGTCTGGGTCCCTAATAAGTATTATTATTTTCTCTTTAGCTAGCTTTATA
CTGTCGACGGGAATGTAATTTTCGAGCAGGATCGTTATTACTTCTTTCTT
TTGCCAGTTTTCATGGTAATTTATATAAAACCTATTATTATGACTACTTT
CAAAAATGTATAATGACTCCAAGTGAATGGGTATCTATTGCTGATTTTGT
TGCATCTTTTGAGAGGGAAAATAAATCCTCACTTCCCTCAATGCTCAGAA
AAGCTATGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGAAATTTTC
TGATTTTGACGAATATCAACTTGCCAAATATCACAAAAAAGGATGTTCAA
GAAAGGTAATAATTTATTTGATTATTAATTAACAAATTGTTATCWAAAAA
AGTTGTTGTCTATTTAGAAAAAGAAATCATCAATCAATGAAGACGTAGTG
CTATCAGATGARGACAACAATGATGATTTGAACCTTCCATCATCTCGTAG
TTTCAATATTAAAAGGCTCATAAGATTATTGCATATTCATCATCCTCAAA
AGTTCGTAATGTGTCTTCTAGGAAAAAAATATCCCAAGTCGGAAGACGAA
TTTAAGAAGCTTAAATTAAGAGGGAAATTTCAACCGGAGAAGGCTGGTAA
AAGAATGCGTTTACAAATTCCATTCACTTGGGAAACTCAAGTTTCTATGT
ATGTAAATGCAACTCATTTGATTAATTAATCATTATAGATTAACAAATCT
GTATTACATTTCCTTARAATATGTAGACACGGCAACAAGCCGCAAGTATG
GCATGATCTGATTTTGAGCAAAAAAATACCARATTTGGCTATGATTCGTA
ATTTAAGAAATATGGTCTTATCCGGCATTAATGAGCATCAGCTAAAGGAT
ATCATTTNACCTAATAATACGTTTCCTATGATTTTTAAGCACTTACTGTC
TTTTCATATGCTCATGAGACATATTATTATTTATTACTAACAATGTTATG
TATCTTAAGAATTGATGCGTTCTTGGAGTTAAAATGTATTCTATCACAAT
TTCAGTTCACCAACTCTCTATAGACTATTAAGAATGATGTGAGTCAAAAT
ATGTAAAAATAGGAATGAAATGGGTTGACTTGAAAAACTCTCCAGCCTAT
TATAAATAATCAATAGACTGATTATTGTATTTGTCTAACGAATAATTCAT
AAACGAAACACACGCAACGTTACGAAATATGCGCAAATATTATAATCTTA
ATGCAATTTCTCCTTGCCTGCCCTCCCAAGCAACGAACAACGTACGTGCA
TTAACCTAGTAGTAATATTCAAGTATTTTCTCTCCCTGAATAGTAGTCAA
TGGTTACAAAGCACGCCTTATTAATTCTTATATATCCTCATTGTTTTCTA
CGTTGAGCGAGTCTCTTTGGATTAATTCCTCATATAAATAAATTAACTGA
TGAGTAATTCATGATCAACATTTTATCAGAATGGGCCCCATGCCTTAGAA
ATATTTAGTTAAATTATAATATTTTTACCTTATCGTTCTTAGTTTATTTT
CTATTATTGTAAAAGGATTACTCATTAATGGATTCTTGAGAACTAAGCAG
GGAACCTTTAACTTATTATATTATAATTTATATGCCTTCATAATAAACCT
TGACAACCATTCAGATTCTATTCTATTTATACGAAATATCAATATGTCAC
ACGAGAGTCACTTACTTAATTTGGAAAATCGATACTTTAAACAATATGAG
AAAATATCCCCTCTACATGAAAATTCATTTCTTTCTTCCAACTCTACAAA
AAATAAAATATTGACATCTATCCAGATTCCCCTACATAATACCTTTCTTC
TGGATCTTAGTCAAGGAAATACCGCAGAGAATGTGATGGAGAATATCAAT
GGTAAGACTGACACAGATACCAAGTTCCAAGGAATGGAAATTCAAGAAAC
TAAATCCCTCTCCTCGAATAAAGAAACTGAAGTCTTTGAGGAGATACTGG
ATGAACCACCTGAATTGAAGATGTACGAGGATGAATATCCAAAGATAGAG
AAATCAAGTTTACACAAAGGATTTGCAGAAGTTCCAATTTCCATTNACTA
AATCCCTCTCCTCGAATAAAGAAACTGAAGTCTTTGAGGAGATACTGGAT
GAACCACCTGTAATTGAAGATGTACGAGGATMAATATCCAAAGATAGAGA
AATCAAGTTTACACAAAGGATTTGCAGAAGTTCCAATTTCCATTCAAAAA
CAGGATCCTGCTCTACTTCAAAAGGTTTGCAATAATAATTAAATTGAGAT
TTTGTTGAATTTCAAGCATTTTCCTTCTGTTTCAGTTTGAACTCATGCAA
ATATGTACAACATCGCTGTTATCCAAGCCCAAATTGTATGAGGCAGAAGA
CCGTATACGGAAAAAAAAATACTTAGTCATTGTGAGGAAGTGA
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