EMLSAT00000002685, EMLSAT00000002685-698532 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002685
Unique NameEMLSAT00000002685-698532
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s154supercontigLSalAtl2s154:743810..744965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002685 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002685EMLSAG00000002685-685451Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011898EMLSAE00000011898-720826Lepeophtheirus salmonisexon
EMLSAE00000011899EMLSAE00000011899-720827Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779566auto779566Lepeophtheirus salmonispolypeptide
EMLSAP00000002685EMLSAP00000002685Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002685

>EMLSAP00000002685 ID=EMLSAP00000002685|Name=EMLSAP00000002685|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
MDWQXSTPSDVHNPPSKLISSNRYGDPTYSPDGSNLVKLIILGAPGVGKT
SIIQVMKIIFDDQDVFNAYIIFQQFVWGYGLRDATAYILVFDLICPDSFE
YVTQLYSQISESRGLEHIPIIVIGNKADKVEMSLSSWRTDKHNRRKHHEE
NDYFHNYEGFSSSSAKYSEYHYQSHDHKHPSLQKSSSNHRSTRMSKYASK
HFSYGSVLQHQSVGGWGKEAFFDKDIAEKVMVEWKATYRECAAKDPESVT
ELFKAIMDLVAESQYGNDLNCKLDKKCAIL
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mRNA from alignment at LSalAtl2s154:743810..744965-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002685-698532 ID=EMLSAT00000002685-698532|Name=EMLSAT00000002685|organism=Lepeophtheirus salmonis|type=mRNA|length=1156bp|location=Sequence derived from alignment at LSalAtl2s154:743810..744965- (Lepeophtheirus salmonis)
ATGGATTGGCAAMTATCCACTCCTTCAGATGTACATAATCCACCCTCGAA
ATTGATTTCGAGTAATCGATATGGGGATCCAACCTATAGTCCTGACGGTT
CCAATCTTGTGAAACTCATTATATTAGGTGCTCCTGGAGTAGGAAAGACA
TCCATTATTCAAGTAATGAAAATTATTTTTGATGATCAAGATGTATTTAA
TGCTTATATTATATTTCAGCAATTTGTTTGGGGTACTTTTGAGCCTTCTT
ATTATCCAACAGGACGCAAAGAGACTTATTATCCTTCAGTGATTTTGCAT
GAGCAGCACTATGAGTTGAAAATTGTAGACATCCCTGATTTGCCCTTTTT
TCCGGTGAATTCCTTCTATAATTTATCAGATTTACAAAGAAAGATCACCA
CATCAAATAATTTATAAATAATAACTTTTTAAATCAACAATTTTCTGAGA
TTACAAAGAATTAACAATTATATTTTTTTATTATTTTTATATACTTTAAT
GGTGTTCTTTCTTTGATAATGATCGCCTTATTTTAAACAAAATAGGCTAT
GGACTAAGAGATGCAACGGCCTATATTCTTGTATTTGATCTCATCTGTCC
TGATAGCTTTGAGTACGTTACTCAACTATATTCACAAATCAGTGAATCTC
GTGGCCTAGAACATATACCAATCATTGTCATAGGAAACAAAGCCGACAAG
GTAGAGATGTCTCTCTCATCCTGGAGAACAGATAAACATAACCGCAGGAA
ACATCATGAAGAAAATGACTATTTCCACAATTACGAGGGATTTTCCTCCT
CTTCAGCTAAATACTCTGAGTATCATTACCAATCCCATGATCATAAGCAT
CCAAGCCTTCAAAAATCATCGTCCAATCATCGGTCTACAAGAATGTCCAA
GTATGCTTCCAAACATTTCAGCTATGGTTCCGTATTACAACACCAGAGTG
TGGGTGGCTGGGGAAAGGAAGCATTCTTTGATAAGGATATTGCAGAAAAG
GTCATGGTCGAATGGAAAGCAACGTATAGAGAATGTGCAGCGAAGGATCC
AGAATCAGTGACGGAACTATTCAAAGCCATAATGGACTTGGTAGCCGAGT
CACAATATGGAAATGATTTAAATTGTAAATTGGATAAAAAGTGTGCTATT
TTATAG
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