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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001806 | Small GTPase superfamily | PRINTS | PR00449 | RASTRNSFRMNG | coord: 37..58
score: 34.32
coord: 238..260
score: 26.19 |
| IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 81..260
e-value: 1.2E-9
score: 37.6 |
| IPR020849 | Small GTPase superfamily, Ras type | SMART | SM00173 | RAS | coord: 34..263
e-value: 1.6E-6
score: -17.2 |
| IPR020849 | Small GTPase superfamily, Ras type | PANTHER | PTHR24070 | FAMILY NOT NAMED | coord: 34..268 |
| IPR003579 | Small GTPase superfamily, Rab type | SMART | SM00175 | RAB | coord: 37..263
e-value: 6.3E-4
score: -60.7 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 81..132
e-value: 3.1E-17
score: 61.8
coord: 220..262
e-value: 3.1E-17
score: 61.8 |
| None | No IPR available | PANTHER | PTHR24070:SF64 | SUBFAMILY NOT NAMED | coord: 34..268 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 32..133
coord: 218..260 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000002685 ID=EMLSAP00000002685|Name=EMLSAP00000002685|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
MDWQXSTPSDVHNPPSKLISSNRYGDPTYSPDGSNLVKLIILGAPGVGKT
SIIQVMKIIFDDQDVFNAYIIFQQFVWGYGLRDATAYILVFDLICPDSFE
YVTQLYSQISESRGLEHIPIIVIGNKADKVEMSLSSWRTDKHNRRKHHEE
NDYFHNYEGFSSSSAKYSEYHYQSHDHKHPSLQKSSSNHRSTRMSKYASK
HFSYGSVLQHQSVGGWGKEAFFDKDIAEKVMVEWKATYRECAAKDPESVT
ELFKAIMDLVAESQYGNDLNCKLDKKCAIL back to top
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