EMLSAT00000002749, EMLSAT00000002749-698596 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002749
Unique NameEMLSAT00000002749-698596
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1597supercontigLSalAtl2s1597:54416..57167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002749 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002749EMLSAG00000002749-685515Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012196EMLSAE00000012196-721124Lepeophtheirus salmonisexon
EMLSAE00000012197EMLSAE00000012197-721125Lepeophtheirus salmonisexon
EMLSAE00000012198EMLSAE00000012198-721126Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770814auto770814Lepeophtheirus salmonispolypeptide
EMLSAP00000002749EMLSAP00000002749Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002749

>EMLSAP00000002749 ID=EMLSAP00000002749|Name=EMLSAP00000002749|organism=Lepeophtheirus salmonis|type=polypeptide|length=231bp
MVFLKVQGQCFWRDAQNLADLHKEIIENKDLHFYDWDNCQFYSYGKPLRD
VEASFAPNSTVEAVWGLVGGKGGFGSMLRALGAQIEKTTNKDACRDLSGR
RLRDINDEEKLKDWIAKQGDREREAAEKKEGKLEKLRRIANGETKHEFHD
PDYEKSREETAXKXHEXFAHAISLKKVELLPKVSSDALKRKSGEKESSGP
VAKKRGAVFIGVDISDSDLESSSDEEDDNST
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mRNA from alignment at LSalAtl2s1597:54416..57167-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002749-698596 ID=EMLSAT00000002749-698596|Name=EMLSAT00000002749|organism=Lepeophtheirus salmonis|type=mRNA|length=2752bp|location=Sequence derived from alignment at LSalAtl2s1597:54416..57167- (Lepeophtheirus salmonis)
ATGGTTTTTCTAAAGGTCCAAGGTCAATGTTTCTGGAGAGACGCACAAAA
TTTGGCGGATCTTCACAAGGAGATAATTGAAAACAAGGATCTCCATTTCT
ACGTAAGTCAAAAAAGTACTTATAATAAATAATTAAAAGTAGTCTTGGAG
CGTACTTTCAAACTTATTATAATTTATATTATTAATTATGTTTAATTACA
AATTCTTTTATAGGACTGGGATAACTGTCAATTTTATAGTTATGGAAAAC
CTCTTCGTGACGTGGAAGCGAGTTTTGCTCCCAACAGTACTGTTGAGGCA
GTTTGGGGACTTGTTGGAGGAAAAGGAGGCTTTGGGTCCATGTTGAGAGC
CCTTGGAGCTCAAATCGAAAAAACCACAAATAAAGATGCTTGCCGTGATC
TATCTGGAAGAAGACTCAGGGTATTATTCTTAAGTCGTTTTTTCAATGAT
TGTGATTATTAAATGTGTTTACATTTAATTTAAAACAACCTATTTCAAAT
TCGGATTATATAGAGTTTAGTTGAATGACTTATCCAGTTGATTCCACTTT
ATTTGGTCCAACTGTGGAAAACATAATTTAATGTTAGCCTAATTTGATCG
AAACTGAGTAGTATAATGAATTTAAATTGCACTTTTTAAGGAAAGGTAAA
CATTTGTAAAACTAATATAGATTATCAATAATTTAGCTGATAATCTTAAA
AAAATTAAAAGTAACTAACTTTGTTTATAAATTAATTCATTTCCATTGAA
GAGATTTACTGTTGTTCATTGTGGATATTAAAAAAAAAAAAGTTGTTAAA
AGATTTGCTGAAAGAATTTGAATTATCAGAGTAGTGTTCCACGAACCACA
CTTGTACAGATACTAAAATATCGAAACAAGCTTGCTAATTTCCAAGTTCC
CATTTTATAATTCACAAATTTTAAATGTGATTTTTGTTTAGTTTGAATAT
AACTGAACCAATCACAAGACAAAAGTTGCAGATCNCAATATGGTCTGATT
AAGTGGAATCTAGTGTATTTCATGTTAATAAATGAAGTGTTAAATATATG
ATAAATGCTTCAATCAGTGGCGCAACTAGCTCCCTTTTACGGGGCTCATC
CCCCCCCCCAAAAAAAACGTTTCTGAAGCCCCCACCCATGTTTTTTAATC
ATATATATATACATATACAGGCTCCTCTGTCTAAAATGCACACTTTTTGA
TTAAATAGATATATATATTTAAAAAATATCATCAAATTTGGAAAATTTAA
TTCATAAATACAATTTAGGGATACATTATTTACATTCTTAATCACTATAG
CCGCCTTTTGCCTTAATGACCATGTTCAAAAATATAAAAGTCTCCAGGCG
GAAGAGTCGGGGCTCCATATTTTTGGTTATGACGCTCTTATTTCTCGATT
GATTTCACTTTTTTTGTTAACAATTTCTTTAAACAATTGTTTAAGGAATC
ATTTTATAGTGTTGATAATTTTTGGGGCTAAGCCTCCCCCATCCAAATGA
TGTACACTATCAATGCTTTAATTATATATAAACTATAGCCTGAATGGTTT
TAGTAAGTAGGTTCCATTAATACTATACTGTAGGAGATACAAGGTGTGTG
TCATTTCTACGAACTAACATTATATTCTTTTCTCATGTAAACGGGGGATT
TTATTAAAATTTTATTAATTGAAATTAAAGTCTTTCCCTACTAAATTGGT
GTATTTCATTTTATATTTAGAAAGTATAAGGTTCGAATATAATTAATATT
CATTAGCCGAAACATTTATGAAAAATTATATCATAATTTCCCGATATTCA
TATGATATAAAAACGTATGTTTAAAAATTCATTGAATAATGATATATATG
GTGCATCAACATAAATACATTCTGGAACAAAAATAAAGAAAATCCCAATT
TATTTTTTTACTTCATATATATAGAGCCCAATATTTTATAGACATAACTG
AGTCAATTATAGACTGTGTATTCAAATTTGTGGAATGAGTTGAGATACTG
AAGAACTTTATCTATAGGGAATAACTTTTATTTGACTTATGAGACTTATA
TTGGACCCCAGATATGGTCAATTTTAGAATTTCTTATTTTTTTGTTGTCA
ATTTTGACTAATTAAAGTAAAATTTGCAGCACCCCCAAAAGATGATTTAG
AATAATGCGTTGATTGAAATGGATGATAATTCGTCGAAAAATTATCCAGA
CTTTGAGAAAAATCGTTCTAGCTTGCTTGTGTGTTGACGGACACATATAA
TGAAAAATTGTTGAAATCACATCTTTGTTCTAAAGTTCATATTTCTATTG
GTGTCTTATATAATATAGATAAAATCTAGTTATATAACTGTTAATTTATA
TTTTCTGTTTTTTAGGACATTAATGATGAAGAAAAGCTGAAAGACTGGAT
TGCAAAACAAGGAGATCGAGAAAGGGAAGCTGCTGAAAAGAAAGAGGGAA
AATTAGAAAAGCTACGTAGAATTGCAAATGGTGAAACTAAGCATGAATTT
CATGATCCCGACTATGAAAAATCTCGTGAAGAAACGGCTGRGAAAGWTCA
TGAAGMATTTGCACATGCCATTAGTCTGAAAAAAGTTGAGTTACTTCCCA
AAGTATCATCTGATGCTCTTAAGCGAAAAAGTGGAGAGAAAGAATCAAGT
GGACCAGTCGCCAAAAAAAGAGGAGCTGTTTTCATTGGAGTTGATATTTC
CGATTCAGATCTTGAGTCAAGTTCCGATGAGGAGGATGATAACTCAACAT
AA
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