EMLSAT00000002846, EMLSAT00000002846-698693 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002846
Unique Name	EMLSAT00000002846-698693
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s163	supercontig	LSalAtl2s163:891566..895901 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002846 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002846	EMLSAG00000002846-685612	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000012653	EMLSAE00000012653-721581	Lepeophtheirus salmonis	exon
EMLSAE00000012654	EMLSAE00000012654-721582	Lepeophtheirus salmonis	exon
EMLSAE00000012655	EMLSAE00000012655-721583	Lepeophtheirus salmonis	exon
EMLSAE00000012656	EMLSAE00000012656-721584	Lepeophtheirus salmonis	exon
EMLSAE00000012657	EMLSAE00000012657-721585	Lepeophtheirus salmonis	exon
EMLSAE00000012658	EMLSAE00000012658-721586	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780015	auto780015	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002846	EMLSAP00000002846	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s163:891566..895901+

protein sequence of EMLSAP00000002846

>EMLSAP00000002846 ID=EMLSAP00000002846|Name=EMLSAP00000002846|organism=Lepeophtheirus salmonis|type=polypeptide|length=572bp
MKASPICLETRPSTLFTPIAHRVRKKFKKMLNKELSHFSEXSRSGNQISE
YICSTFLEKNNEIDISSGGNVTDMAEENDTPDPKCPSPTVPPPPIPLNSS
SCQGNNNNSSVKVSGRLMSRISAKTDVKVKTTLNESEEVPPYGVLTDHEA
ELNKILGGINTWGLNVFKTAELVQDRRVLTCITYNIFKERDLLNTFKIQP
KILVNFLMTLEDHYLSDIPYHNNHHAADVTQSTHILLNSPNLNSVFTPLE
VFAAIFASAIHDVDHPGVTNQYLINTSSELALMYNDESVLENHHLAVAFK
LLQNPDCDIMANLNSKQRQTFRKMVIDMVLATDMSKHMSLLADLKTMVES
KKVAGSGVLLLDNYNDRIQVLQNMVHCSDLSNPTKPLEIYREWVDRIMEE
FFQQGDRERSAGIEISPMCDRDNATIEKSQVGFIDYIVHPLWETWADLVY
PDSQYILETLEENRNWYSSVIPSSPTDLYQNELREGSNEDEEESVRVLDS
SSDYEKEEEEIRNKYLEEEEKEVDLEQKEKGEEEGIKQGQDETYKRGFTI
QVTKSSTDQESPQGSTKIETCL

mRNA from alignment at LSalAtl2s163:891566..895901+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002846-698693 ID=EMLSAT00000002846-698693|Name=EMLSAT00000002846|organism=Lepeophtheirus salmonis|type=mRNA|length=4336bp|location=Sequence derived from alignment at LSalAtl2s163:891566..895901+ (Lepeophtheirus salmonis)
AGCTATTGCTTATTTATAGGTGGTGAACTCTCTCGCACATCATTTCAACT
TTTAGTTTTGTATTGTAGCTTGAATGTGCAAGATATCCATTCGCAACACA
AAAAAAATATTTGAAAAATTCTCCAACAATTTACAGTTCATTATTACTTT
ACTTTTTTTTGTTAATTGAAGTCAATCCAGACTTTATTTTATAAAAATAA
AGCTTTATCAATCACAATGAAGGCTTCACCGATTTGCCTAGAGACCCGGC
CCTCCACTCTATTTACTCCGATAGCTCACCGTGTAAGAAAAAAAGTATGT
TATTATTTATTCTGCATATTATAAGTTTTAATGCATAAATTTCTATTTAA
TTCAATGCAAGGAACATTTTTTACTTTTGCATAATGTCTCTTTTTTTAAA
GAGTCAATTTAGAAAAGGATTATAAAAATCCTCTCTTGACATAGTTTTCC
TAGATTAAGTAAATTGCAATATTTGCAAAAACAATTTAGACATTTATATT
TCCCCTTCTGAACAATTACCTAAATTAGTTATCAAGCGGGAGTAACTCAT
AAGTACAACACATTAAGTACATTAAGTCTGGATTGTATCGGTTCGAGTTT
GAATATTGTATGGTGTTTCATTTTTAGTAATAAAACCCACCATTTATTTC
TGAAATAAGATAAATTAATCTTAGTTTGTAGCAGTATTGACAAACTTAAA
CAGTCTTGATATATCTGTAAACTACCAATTAGCCTAACAGCTATACTTTG
TAATTATATTTGTTGAAGCCCATTTAGTGAAGATACCCTGATGAATATCG
TTATACAAACCCCCTCATTTTTAAGATCGATTGGAGTTATAAAGTCCACT
CATTTATATGTTTTACAACTATATAAAAAAATCAATTACCCAGAATATTT
AGGGGTATTTTTTATACACAAATTCTTTGTTACAATCATATTGTGTAACT
AATAGTAATAGACAGTCCCCAAAATGAGGAAGCATATGAACAACAACGGG
ACTTTGGTTGTATCTTAATATCTACGAATCTTCCTTCAATAGTTATATAA
ACCTTCACATTTTCTTATCTATACGTAATATATAACTAATAACAATAGTA
GTCAGACGTGATGATTGCTCAAGAAAAGATGGGGGGTACTTGGCTCCTTT
TATAAAATATATTTCTTATTTTTTTAAGGCAACTGGCGCCACTTCAATCA
TAAATATTCTTTGTGGTGTGTATTATAATTCATTGAGTATGTTGTACATT
GTCGAGGATTGTTAAAGCATAGTATAATATAATATACGTATTAAGTAATT
TTTTCCCCACTTTTTAACAAAAATAAATATTTATTATATTTTTAACGATT
CATTCTACTTTTCTGTACATATAACATTATTTTGAGGTTGTCTGTGCTGT
TATTATACCCATAAATGGTATAATTTGGGTCTTTTCCTTCTTCTTTTTTT
TTCTTATGGATACATTTTTTTTACAATATTAGATTAGGTATTATAATACT
TATGTGTTTTGAGTCTTTCTTTTTCTGACGCCAGACCAAAATTAAATATA
AAAGCAATAACAATAAATTATTACAACTCTCGTTATCATCTCTGTAGCAT
TGTATGGATGTGTCATAGAGGATTAGGAGACCTTATGCTATTCCATCATG
ACCATATTTAGTAGGGAATTGCATTTTAAACAGCAATACATAGATGAGAG
CCGAACCCAATATTATTTAGATATTATTTATGATGATGAATTGATATTTT
TGTTCCGTATTTATCACTCACTCAATCCCTCTTTTTTATTATTTGATTAC
AGTTCAAAAAGATGCTAAACAAGGAGCTGAGTCACTTTTCAGAGASCAGC
CGCTCAGGGAATCAAATCTCCGAGTATATTTGCTCCACTTTTCTTGAGAA
AAACAATGAAATTGACATATCATCAGGTGGTAACGTCACTGACATGGCGG
AGGAAAATGACACACCGGATCCAAAGTGTCCCTCTCCTACCGTCCCGCCT
CCACCTATCCCCCTTAATTCGTCCTCATGTCAAGGAAATAACAACAATTC
ATCCGTCAAAGTAAGTGGTCGGCTCATGTCGCGGATCAGTGCTAAAACGG
ATGTCAAGGTCAAAACAACGCTCAATGAGAGTGAAGAAGTTCCTCCCTAT
GGTGTATTAACGGATCATGAAGCGGAGTTAAATAAGATCCTTGGAGGGAT
CAACACTTGGGGACTGAATGTATTTAAAACTGCTGAGTTAGTCCAGGATC
GCCGCGTTCTCACATGCATTACCTATAACATCTTCAAAGAAAGGGATTTG
TTAAACACTTTTAAAATTCAACCCAAGATACTGGTCAATTTCCTTATGAC
CCTGGAGGATCACTATCTGAGTGACATTCCATATCACAACAATCACCATG
CAGCTGATGTAACTCAATCCACGCACATTCTTCTCAATTCTCCTAATCTT
AACGTGAGTCCCTCTTATCTTTCTATCCATTTATTCGGGTTAATTCATTA
ATTAATCATTTGCAGTCTGTATTCACACCTCTCGAAGTCTTTGCCGCTAT
TTTTGCATCTGCGATACATGACGTAGACCATCCCGGAGTAACAAATCAGT
ATCTCATTAATACAAGTAAGTCTAATCAATGGTCCTACATAGTATATACA
TATTAACTATGTACCTATAATTCTCATTTATTAATAATTATTGTTATTCT
TAAAGGCTCTGAATTAGCTCTTATGTACAATGATGAATCTGTGTTGGAGA
ATCACCATTTGGCCGTCGCATTCAAACTTCTTCAAAATCCTGATTGTGAT
ATTATGGCGAATCTGAATAGTAAACAGAGACAAACATTCAGAAAAATGGT
CATAGACATGGTAYTAGCCACAGATATGTCCAAGCACATGTCACTCCTCG
CAGATTTGAAAACCATGGTAGAGTCCAAAAAAGTTGCGGGTTCTGGAGTT
CTTTTATTAGATAATTATAATGATCGCATACAAGTAAGTTTATCCAAACT
TTACTCTCACTGAATAAGAGATCAACATTTTTACTTCCAAACTTGATTAG
GTCCTACAAAACATGGTTCATTGTTCCGACCTTTCAAATCCTACCAAACC
TCTAGAAATATACCGTGAATGGGTAGATCGTATTATGGAAGAGTTTTTCC
AACAAGGAGATCGAGAACGTTCAGCGGGTATTGAGATATCCCCCATGTGT
GATAGGGATAACGCAACTATTGAGAAATCTCAAGTCGGGTTCATTGACTA
TATCGTACATCCTCTATGGGAAACATGGGCTGATCTCGTTTATCCTGACT
CACAGTATATATTAGAGACTCTAGAAGAGAATCGCAATTGGTATAGTTCC
GTGATTCCATCTTCTCCTACAGATTTATATCAGGTAAGATATCGTGTTTG
TTAGTATTATGCTAAAGTATGAGTGCCTCATTTTTGTTCTCATTTAATAG
AATGAACTACGTGAAGGAAGTAATGAGGATGAGGAGGAGTCGGTACGAGT
CTTAGATTCATCCTCAGACTATGAAAAAGAGGAGGAAGAAATCCGAAATA
AGTATTTAGAAGAAGAGGAAAAAGAAGTCGATTTAGAGCAGAAAGAGAAA
GGGGAAGAAGAAGGGATCAAACAAGGACAGGATGAGACCTACAAACGGGG
ATTCACAATACAAGTTACAAAGTCTTCTACGGATCAAGAGAGTCCACAAG
GTTCAACAAAGATAGAGACGTGTCTATAGGGTCTACCTGTAGTGAAGGAT
CTGTTAACATTTTTCAAAACATTTGGAAATAACGCAGATAGAAAGGAATA
ATTTTAACAAATTAATGATACTGACAGATCCTTCATTAATAGCTCGCTTC
TTCGTACAAGAACTCTGAAGGGTGCTGCGACTTCAGAAGCATCCTCTTAA
ATGTATATTTATCTCTCCAATAACTACATAGTTACATATTTATATACAAA
CTACATACATACAAAAAGTGTCAATTAAGTTCATTTATAGATATTGTACA
CCCATAATTATCTTATTTTTACTATTATTCTTTCGTTATTATCCTTTTAT
ATGTATATGTTCCTTTAGTCTAAATGATGATTTCATTATTATATATTTAT
CTTTTTATGGTCCCCTCTCCCTCTCTTTAAGTCTTAGTAAGAGACACACA
TACCCCTTTCACATGAATTCATACTTATATATACTTATATATATATCTAT
ATTTTTAAATTGTTTCTCTTCTACTATAAGCTCAAATTTTATGAAAACAT
GATGTTATATTTTTCTTAAATATTGTTTTTGACTGATGGAAAATGTAGTT
TGAAAAAAAAAAAAAAATACATTAAATGATCGAGAA

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