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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s164 | supercontig | LSalAtl2s164:1240..6494 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002856 >EMLSAP00000002856 ID=EMLSAP00000002856|Name=EMLSAP00000002856|organism=Lepeophtheirus salmonis|type=polypeptide|length=409bp
FFADLNSPYSAKRGEVLQVNATVFNKVEGPLPMKLSIEASEEYSVVNKSE
EFICVNPGGNVPIDLYIKLNKLGKVNLTVKAEIVEDESCGGVSKESVGYA
DTLVKSINVRPEGFPKEVVKSYFLCGEQKDLALEDTILPETNLVDDSVRA
WFGISGDIMAPAVKNLDGLVALPTGCGEQTMIRMVPNIYLLDYLKSIGKS
LPSLESKAKGYIQTGYDRQNRKFRHRDGGYSIWGPKSSEEEGSMWLTAYV
VKAFSQASKYIDVDMKLLQKSVKWIIKRQDFETGCFHNEGYAYSVNSPRE
TLTSHVLVTLFEAKYTADLGDSIDSKVIHKALRCIKVSQTEKDTEESGDS
PDESIEEMDDLKKLDQDGESLYAQSLKTYAIHLLETKPDLKKKLEKNLKR
SKEWAFSKI back to topmRNA from alignment at LSalAtl2s164:1240..6494+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002856-698703 ID=EMLSAT00000002856-698703|Name=EMLSAT00000002856|organism=Lepeophtheirus salmonis|type=mRNA|length=5255bp|location=Sequence derived from alignment at LSalAtl2s164:1240..6494+ (Lepeophtheirus salmonis)
TTCTTTGCTGACCTTAACTCTCCTTACTCTGCAAAACGTGGCGAAGTTTT
ACAGGTCAATGCTACAGTGTTCAATAAAGTTGAAGGGCCTTTGCCTATGA
AGTTGAGCATTGAAGCGTCTGAAGAATATTCAGTTGTCAATAAATCAGAA
GAATTTATATGTGTAAATCCTGGTGGAAACGTTCCTATTGATTTATACAT
TAAGCTCAACAAATTAGGCAAGGTCAATTTGACAGTCAAAGCTGAAATTG
TTGAAGACGAGTCCTGTGGTGGTGTTTCAAAAGAATCTGTTGGGTACGCT
GATACTCTAGTTAAATCAATTAATGTCCGTCCAGAAGGATTCCCTAAGGA
AGTTGTAAAATCTTACTTTTTATGTGGTGAACAGAAAGACTTGGCCCTAG
AAGATACGATCTTACCTGAAACGAATCTTGTCGATGACTCTGTTCGAGCA
TGGTTTGGAATCTCAGGAGACATCATGGCCCCTGCAGTTAAGAACTTGGA
TGGACTTGTTGCTCTTCCTACTGGTTGTGGAGAGCAAACAATGATACGAA
TGGTGCCGAATATATACTTATTGGATTATCTAAAATCAATTGGAAAGTCT
TTACCATCACTTGAATCAAAAGCAAAGGGATATATTCAGACAGGTTACGA
TCGTCAGAATAGAAAATTCCGTCATAGGGATGGAGGCTATTCTATTTGGG
GTCCTAAGAGCAGTGAAGAAGAAGGCTCAATGTGGCTTACAGCGTATGTT
GTAAAGGCATTTTCCCAAGCATCTAAATATATTGATGTAGATATGAAACT
TTTGCAAAAATCAGTTAAATGGATAATAAAAAGACAAGACTTCGAAACTG
GATGTTTCCATAATGAGGGTTATGCCTATTCTGTCAATTCTCCTCGAGAG
ACTCTTACATCCCATGTCTTAGTTACATTATTTGAGGCTAAATATACTGC
AGACTTGGGAGATTCCATCGATTCCAAAGTAATTCATAAAGCTCTCAGAT
GCATTAAAGTATCTCAAACTGAAAAGGATACAGAAGAAAGTGGGGATTCT
CCAGATGAATCCATAGAGGAGATGGATGACCTTAAAAAATTAGACCAAGA
TGGTGAATCACTTTATGCTCAATCCCTCAAGACTTATGCCATTCATCTTC
TTGAAACCAAGCCTGACTTAAAAAAGAAATTGGAGAAGAATTTGAAGAGA
TCAAAGGAGTGGGCCTTTTCAAAGATCTAATGAAGGAATCGAAAACAAAT
GATAAAGGATATCTGTATTGGCAAACAAATAACTCTCTCTCAAGATCTGT
GGAAATGACTGCCTACAATGTCATGACTCTACTCTTCAATGATGAGCTTA
TTGATGCACTTAGTGCCATTCGATGGATATCCGGACACAGAAATGGAAGA
GGTGGGTTTATTTCGACCCAAGATACAGTGATTGCGCTTCAGGCCATCAG
CATGTACTCAACTATGGTGTATGAAAATGACACAAGTTTGAACATTCAAT
TCTCTAACAAAACCTCTGAAATTGATACTTTTGATATTGATGAGGATAAC
AAGCTGTTGTTTAATAGAATTAAAATCGACAATCTTCACGACTTAAAGGT
AAACTCATTTTTATTTTATTTTATTTGAATCTGCAGTAACTAATATATGA
ATATATATATATAGGTCAATAGTACTGGCAAGGGCTGCTACACATTCTCC
ACAATAGTCCGTTACAACGTGAAGGAAGAAAAGGACGAAAATGCCAAGTT
TCTCATTSGAGCCGAAGCCAATAAAACAACTCTTCATATTTGTTCAAGTT
ATATTGGTGATAAATTAGAAACAAATATGGTTCTACTAGAAGTAGAGCTT
CTCAGTGGTTATGACATAGTTGAAAGCTCCTTGGAAGTCCTTTTAAATGA
GCTTGAGTCGGGTGTGGAGAAGTACGAAATTAACAAAGACGAAAGAAAAT
TTGTTCTTTATTTTAATGGATTAAAAAAAGAGGAGAATCATTGTTGGAAC
TTTGAAGTGAAAGAAGTCAGCCAAGTGGAAAATCTTAGACCCGCTCTTAT
CAAAATTTTTGACTACTATTCTCAAGAAGATGTATTTACAACCACATATA
ATATTGAATGATTTTTCAATCAATCATGTAGAAATGAACTTATTCACGCT
GTAGTCACATAATCAGGGAAATGAGTTCTTATATTAATTATTATTATATA
CAAATTTTATCTGTAAAAAAAAGAGAGATTTAATATGCATGCCATTATTC
CCCTAAAGAACTTATTTATTTCTTCTAAATCCTGTCACGATTAAAATCCA
GTAATTAAATTCAGTTTACAGTCTTGTTTCAAAACTGATTTGACAGTGCA
CTCCTTTAAATTAGTGTTACAATTATAAATATTTTTTGTAATCAAGCTAC
AAATAAAGTCGCCGAGCTCTGATTTCAGAAGAAAAAAAGTATTATATTTT
ACACTTAGTATGATAAATATATATTGACATTTTATGTTATTAAAAATAAA
ATAAACATAGGATGATATACCAATATTGATTTTCGTAACATGGAGCTAAA
ACAAGAAAAAGAGTCCACTAAACATTTTTTAAACGGTATAAATATGAAGG
TTGAAGTATGTACTCTAATTAATGTCTTCCTTGTAGACAATTATGACTTA
AATATGTTATGATTATAAACGCTTGATTGAGTGTTGATGAAACTTAAATA
AATAATATCAATCAAAATTAGTTACCCATTAAAAAAGGATCAGTCATTTA
AAAAAAAAAAAAGATGTTTAAAGAACGATTTGATTTTGAGTTATGAATTT
AATATAAAAGGATTTAGATAAACCCTTAATAGTTTTTAAACTTTCTATAC
TCTCTAATGAACCATTCAAATTCCTGAAAGCAAAAAAAGAAACAAAAATT
AGCAAACATGGGAGCACCACCCCATAACATTANNNNNNNNNNTCTCTTAT
ATAAATGGTCTGATACTATCACTTACCTATACATATGAATAACCATAGCT
GACTTAGGACCAATAGCTGGCAAAGCCTGGAGTACTCTCATATTGCCTGA
ATTCAAAATTTTTAATACATTTTCGTTATGACTTTCTTGAGACTGAACGC
TCCAATTTTCAGCTACATTCATGGGATGCTGGATTTCACTGTTCCTTTTC
AAATTTTTTTCCTGAAGACMCACACTTCTTCTTCTACTAGACTCATATTT
TTTATCAGACAAGGACTTACGAACGTTTTTAAGAGTTTCCTCCATATATT
TATCGTTTATTATAGCTTGTCGTCGTGTTTTTCTATTTTCAAATAAAATA
GGACTCGAGGGATTAATCCCTAATTCTTTCTCCATCATGGACATAAGCAA
CACATTTTCCTTCTACAATAATGGAAACAAAGTTATTTTTTTCTTTTACT
TCTTACTTAAGCCTCAATAAAATGATAAATGTTTGAAATAATTTGCAAAC
ATTCTCGGTCAATTAAAAATATCTTTATTTAATCATACCTGTACGTGAAT
GTCATTAGTGACATCTTTTAATACAGATCTACTAGTTCTTCGGGAATTCC
TACTTGGAGCTTTCAATGTAATGTCATATTCTGGAGAAGATTCAATTCCC
AAAATATTAGGACTTCTTAATTTGCTTTTTCTTTTCTGGTGAGTTCCTAA
TTGCTGACGCAAGTCTTTTATCTCCTGAATTAAGGGCTGTATATGACGAA
CTATAGTATTTTCACATTCTTCATTATACTGTCGGAATATGGGATCAAAT
CCAGTATTTGAAGTCATAGTCGAACTTAGAGATATATTTGATATTTCAGG
AATATAATTATCTGGCGGTTCTTCAAGACAACTATGCGGATAGGCTTTAA
TTGTAGTCGAAGATAGCCAATTAGAACGATGATCATTCACCAATCTACTA
TTTTGCGGGGTTTTAAAGGGGTAGTAGGACTTTATTGTGGAGTCCCACAT
CCTTGAATTTTGTTTATAAGGTGTACCAGAAACATATTTCTTTTTTAACG
AAATGGATTGTTTTTTTATTCTTTTTGCCCTGTAGGCATAACGAAGGGTA
TTAGCAGTATCTGTTATATCTTTTTCTTTATGACTTACGCATGCTATCAT
AACAGTATAACAGGCCGAAGACTGCAGACATTCTGTAAAATAAAGTAAAA
AATTCAAAAATCAAAATCTAGCCCAGCCTGAATTGATAGAAGTAACTACC
TCTAAGAATTTTGGTCAAAACAGAGTCTCTGAACGGTATATGCGCTTTTT
TCGAACAAAGAGATTCAATCACATTTCCCAGAGCAAGAAGCGATTTGTTG
ATATTGAGTCCTTCAATGAGTGTTTGTCCTGTAGCATGCGTTCGCTTCAG
ACATTCTGATCCGGCTAAATCCACCATATTGATTTTAAAGAAGGCATTCT
CACATTTTATACTTAACGTAAAAATGGCATGAGAGCGAGACGAAGCGCGG
TTGGKCCCCGTAACTCCAATGGACCGTGTTTCTCCTCCTTCCACAAGGAT
CTGCATCACCTCTTGATAGGATTCAACGGGAATGGAGCTGAGAGACAGAA
TGTTGAATTGATGATTTTGGTCTTCCTTCAAAAGGAGCGGCACTCGTTCG
CCCATGAGGAGATCGAAGATCTGCTCGTTGTAAATCTCGAAAAAAGACAC
TTGGAGGGAGGTCTTGTTCCACTGCATTGGATCCGACTTGAGATGCTCCA
AGACCTGATGCACGACTCTGGGAATGGCGCCCTTCTCCTCACCCTCCTCG
CCCTCGTCACTCATACTCTGCAAAGGAATTCAAACAACATGAGAGGAGGT
CCGCTCAACAACCATTTCTACTCCTTACGCCGGGATTCGTGCCCATCGTG
TACGTCTTCCCTGTTCCGGTTTGTCCATACGCAAACACAGTCACGGATGC
TTCATTTCGAAGAGATTCTCTAATGATAGGCTCAAGGTGAGCTTCATAGA
GTTCCCCTTGTCTTTGATCCGCTGGAATCACTCCATCAAATAAAAAGAGT
CCGGAACCTTTGCTGGACTCGAGTGACACACTATTCTCCTCGGGATTCGC
TTGGKGATAGGCAGAGGCTCCACGACAACGAACAAGCACAGAGAGAAGAT
CCATTGAGCAGAGGATTAATCCCTTTCTTTTGGTTTTTCTCTCCAAAGAA
CAAACTAAAACACAAAACAATTGAAATGTCAAATGTTTGGCGGGGCGAGT
TGAAACTTGAAATCGGATTCAAGGCAGGGAGGGACAGCCTAGAGCTTTTT
CTTAG back to top
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