EMLSAT00000002878, EMLSAT00000002878-698725 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002878
Unique NameEMLSAT00000002878-698725
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1665supercontigLSalAtl2s1665:17512..18051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002878 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002878EMLSAG00000002878-685644Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012770EMLSAE00000012770-721698Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769321auto769321Lepeophtheirus salmonispolypeptide
EMLSAP00000002878EMLSAP00000002878Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002878

>EMLSAP00000002878 ID=EMLSAP00000002878|Name=EMLSAP00000002878|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MNKMFHRLEYNIVLSETTILDPRFKKLAFNDTTAFDETVQRITSRAARFS
HPSPMSEGQEGTEEKQERRQESDVWRLFEERLTGDSTRRNPLSDSIMEVR
SYLEEPLFQRSADPLNWWESRASVYPRLTYLMKWRLCIVATSIPSERIFS
KPGQIITDRRSQIRPSMVKQLVFLNANLQ
back to top

mRNA from alignment at LSalAtl2s1665:17512..18051-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002878-698725 ID=EMLSAT00000002878-698725|Name=EMLSAT00000002878|organism=Lepeophtheirus salmonis|type=mRNA|length=540bp|location=Sequence derived from alignment at LSalAtl2s1665:17512..18051- (Lepeophtheirus salmonis)
ATGAACAAAATGTTCCATCGATTAGAATATAACATTGTTTTGTCAGAAAC
GACAATTCTTGATCCACGATTTAAGAAGCTGGCATTCAATGACACTACAG
CATTTGATGAAACTGTTCAGAGAATAACTTCTAGAGCAGCAAGGTTCAGC
CATCCAAGTCCAATGTCAGAGGGTCAAGAAGGAACAGAAGAGAAGCAAGA
GAGACGACAAGAATCTGATGTTTGGAGGTTATTCGAAGAACGACTAACTG
GAGACTCCACAAGAAGGAATCCTTTATCAGATTCCATCATGGAGGTGAGA
TCCTACCTTGAGGAGCCCCTTTTCCAAAGAAGTGCTGACCCACTAAATTG
GTGGGAAAGTAGAGCTTCCGTCTACCCACGCCTCACATATCTGATGAAAT
GGAGACTCTGCATTGTTGCAACATCTATCCCCTCCGAGAGAATCTTCTCT
AAGCCCGGTCAGATTATCACTGACAGAAGAAGCCAAATCCGTCCCTCAAT
GGTGAAGCAATTGGTGTTTTTAAATGCCAATCTTCAGTAG
back to top
Add to Basket