EMLSAT00000002913, EMLSAT00000002913-698760 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002913
Unique NameEMLSAT00000002913-698760
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s167supercontigLSalAtl2s167:477975..481013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002913 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002913EMLSAG00000002913-685679Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012910EMLSAE00000012910-721838Lepeophtheirus salmonisexon
EMLSAE00000012911EMLSAE00000012911-721839Lepeophtheirus salmonisexon
EMLSAE00000012912EMLSAE00000012912-721840Lepeophtheirus salmonisexon
EMLSAE00000012913EMLSAE00000012913-721841Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778018auto778018Lepeophtheirus salmonispolypeptide
EMLSAP00000002913EMLSAP00000002913Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002913

>EMLSAP00000002913 ID=EMLSAP00000002913|Name=EMLSAP00000002913|organism=Lepeophtheirus salmonis|type=polypeptide|length=188bp
MLEQYQSASLLASVIALLTYFGIFISNAEEYHNRSTNLFTSCETCCCKVK
SQLLPCRTLVSCSKEIQRERLRPADKLPANGVLHFTHHHKLLKIIVADIS
QNYDGSAWAKNGLLMVTSTLIKLCKAKPMKPINDAKCHNIQLLPSDTFYS
IYCPSWQLYFHTGSREISGMPIHDLALEKCFLIAKYFK
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mRNA from alignment at LSalAtl2s167:477975..481013+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002913-698760 ID=EMLSAT00000002913-698760|Name=EMLSAT00000002913|organism=Lepeophtheirus salmonis|type=mRNA|length=3039bp|location=Sequence derived from alignment at LSalAtl2s167:477975..481013+ (Lepeophtheirus salmonis)
ATGTTGGAACAGTATCAAAGCGCCTCTTTGCTCGCCTCGGTGTATATCAT
ACTCGTTTGGGTCTCCAGCATTATCAACAAAAGCAAAAAAACTCACTTCC
CCTTAGAAACTTTTTTTTTTAGTATTGCACTTTTAACTTATTTTGGCATT
TTCATATCCAACGCGGAGGAGTATCACAATAGGTCCACGAATTTGTTTAC
TTCCTGCGAGACATGCTGCTGTAAAGTAAAAAGTCAGCTTTTGCCTTGTA
GAACACTAGTCAGTTGTTCAAAAGAGATACAAAGAGAGCGTCTACGACCA
GCTGATAAACTACCTGGTTAGTTCAAAAGTCGTCCACGATTAGCGCAGCC
ACCCTGTACTTGAAAGGCCGAAATGGGTATCAAAGAATTGCCAATCGACC
TTAGAGATATCTGATGACAATGATGGCTTTTTGCGGATGTATCCCTTTTG
TCAACACCAATAATTGCAAGTCTCTTTTTGATACCTTGGAATTTTAATGT
TCTTGCTAAATTAGAAGATATAAAACTTATGAGTGAACTTTTGTCAAACA
TGACTTGTGCAGAAGCAAAATATGCCGTATTGAAATAAATTTTAAATAAA
TAACGTACTCATTGATGAAGAGATCACCAGATTTCTCCCCCCCCCCCCCR
RCAATCTCCTTACTATCTCCACTAGTTTTATAATGTATGTACTGTGATAG
TTGTATTTATATATTTATACGKMMACAGGSTKGATACTGGAGGGCCGTAT
GACCTTTGTAATAAAGTTTTAGACATAGTTAGTCTCCTTCACACCTTTCC
CTCGTTAAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCACATTT
AATATGCTCTTTTAAAGATGTATTCTTAAATGAACTACATTTCCAAAGCT
GATGAGACCCGCCCGAACCTAAAAAACAAAGTGTATCATTTACACTAACT
TGTAATACGTTCCTTTTCGACGAATGTTCAAGCTTGACTCCAGTCTCACC
CACTCTGACTGCAATCTCCAAATGTTCATTAATTTTATTTATGGTAGAAC
AAGAACAATCATTGGAGCTCACAAAATGCTCCCACCCTTCTCTCAATATC
CTTGGAAGTCTATTTTAAATAATTGGGATCACAAATCATCTGGTGATCTC
TTCATCAATGAGTACGTTATTTATTTCGAAAGACCTTTTACAGATGATAA
AATGTCATAAAACTGACTAAGATCTCTTTAGTTATTCTTACAAGGAAGTA
AATCAATGAATTCTTGAACGTGCACGTTGATAACCGATCTGCTCTTACGT
TCCCTTGCATGTTTCAACTCTGCTTCTTGTTCATATATATGTGGGGGTAC
ACAAAAGAGAAGATCATAATCATAATTAACAGTCAGTGTTATTCCCACCA
TTTTCATTGAGCCGAAGGACAGGGTGGGTGCCGACAGGTACTCCTGTTCT
ACAAAATGATACCTTGAATAAAAGCTAAGGCAAATGGTGTGGAGTTCCTG
TTTCAACAAGACTTGGCCCCCTCTCAGAAGGTCTGGTAGACCCAAAACTT
GTTTAAAGTWTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATCGTTTACTTT
AACGCCCTCATATTTTAAGATATTGGTTTGTATATAATTATGGTGGCACT
TATTAGGGCAAGGATATTATTGTTCTCAAGGAATTGCTTCTCAGCTATAA
TTATGCTGGAGTTGAGAACATGGAATCATTATTAGTTGGCAAGACAAATC
ATTTTAAGTAATAAGCTATTTATTTTTTTAATTCAGCGAATGGTGTCTTG
CATTTCACTCATCATCACAAACTCCTAAAAATTATTGTAGCTGATATTTC
CCAGAATTATGATGGAAGTGCATGGGCCAAAAATGGACTTCTAATGGTTA
CATCCACTCTCATCAAACTTTGTAAAGCCAAACCCATGAAACCAATCAAT
GATGCCAAATGCCATAATATTCAACTCCTTCCTTCAGATACATTTTATTC
CATTTATTGTCCATCCTGGCAATTGTATTTTCATACGGGCTCTAGGGAAA
TTGTAAAAAAGAGACTTAATAATAGTTTAATAGCCCACTATTGGGGAAAA
TTGTTATCAAATCAAAAATAAAGTCAGGAATGCCCATTCATGACTTGGCT
CTGGAAAAATGCTTCCTTATTGCCAAGTACTTTAAATAA
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