EMLSAT00000002980, EMLSAT00000002980-698827 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002980
Unique NameEMLSAT00000002980-698827
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:183891..184860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002980 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002980EMLSAG00000002980-685746Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013135EMLSAE00000013135-722063Lepeophtheirus salmonisexon
EMLSAE00000013136EMLSAE00000013136-722064Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774073auto774073Lepeophtheirus salmonispolypeptide
EMLSAP00000002980EMLSAP00000002980Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002980

>EMLSAP00000002980 ID=EMLSAP00000002980|Name=EMLSAP00000002980|organism=Lepeophtheirus salmonis|type=polypeptide|length=276bp
MTDLNICVLFISQIPPHRILGRIDTTLFPLHLPQYTKEQTIKILSHEVES
AMSGYPSTFYYGXANILVASFFSVTRNVKELLGLAFDHFNTYKEPVDDKS
IGATSMRALFRAFEPKLKALGENVLYRESGGEVVSMKERLKVELPFFXXF
LLXAAYLSSHNPSKSDKRFFVKHHGKQRKTKAMIKAKQRYSSQLTGPKAF
PIDRLLAIFYAIVEDRASPSANILSQISTLVTLQYLVQVGGDLDMPKYKC
VAGLDFIRNLSRTVNFEIVKYLYDYA
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mRNA from alignment at LSalAtl2s170:183891..184860-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002980-698827 ID=EMLSAT00000002980-698827|Name=EMLSAT00000002980|organism=Lepeophtheirus salmonis|type=mRNA|length=970bp|location=Sequence derived from alignment at LSalAtl2s170:183891..184860- (Lepeophtheirus salmonis)
ATAGTATTCGCCTTAGATTCTGCGGATCGCTTGAGATTAACAGATCCAAA
AACCCTCTCTGGGTTTCTCCGCATTCGAGAAATGACGGATTTAAACATAT
GTGTTCTATTTATATCACAAATCCCTCCTCACCGAATTCTTGGACGCATT
GATACTACCCTCTTTCCCCTACACCTTCCCCAGTATACCAAAGAGCAAAC
CATCAAAATTCTTTCTCATGAAGTTGAGAGCGCAATGTCTGGATATCCTA
GCACTTTTTATTATGGCTAKGCTAACATACTTGTAGCGTCCTTCTTTTCC
GTCACACGTAATGTCAAAGAGCTACTTGGGTTAGCATTCGATCATTTTAA
TACGTATAAGGAGCCAGTGGATGATAAATCCATTGGAGCAACGAGTATGA
GGGCTTTATTTCGCGCTTTTGAGCCCAAGTTGAAAGCCCTTGGAGAGAAT
GTATTATATAGGGAGTCGGGAGGAGAGGTTGTATCCATGAAGGAACGACT
AAAAGTAGAGCTTCCCTTCTTCRCCANGTTCCTTCTCWTTGCCGCCTATC
TATCCTCTCACAACCCATCCAAGTCGGATAAACGATTTTTTGTGAAGCAT
CACGGGAAACAGAGTAAGTTTAAAAAAAATGTCTCAATTTATCATATAAA
AACGTATCATTTAACTTCTAGGAAAGACTAAGGCAATGATTAAAGCCAAA
CAAAGGTATTCATCCCAATTGACTGGTCCCAAGGCTTTTCCAATAGATCG
TCTTTTAGCTATATTCTATGCCATTGTTGAGGACAGAGCTTCCCCCTCTG
CGAATATCCTCAGTCAGATATCTACTCTTGTGACACTTCAGTATTTGGTT
CAAGTTGGTGGGGATTTAGATATGCCCAAGTATAAATGTGTTGCAGGGTT
GGATTTTATTCGTAATTTGTCAAGGACTGTTAACTTTGAGATAGTCAAAT
ATTTGTACGATTATGCATGA
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