EMLSAT00000002990, EMLSAT00000002990-698837 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002990
Unique NameEMLSAT00000002990-698837
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:441946..442434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002990 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002990EMLSAG00000002990-685756Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013161EMLSAE00000013161-722089Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777714auto777714Lepeophtheirus salmonispolypeptide
EMLSAP00000002990EMLSAP00000002990Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002990

>EMLSAP00000002990 ID=EMLSAP00000002990|Name=EMLSAP00000002990|organism=Lepeophtheirus salmonis|type=polypeptide|length=162bp
MVFGDEGTGGDEDSTSKKYEKKFSSDSDAGSENSQHEEEEDSWPTAPPLD
YFDSIKGYEMVSFDAVSVPPPPSVLPPAFSLLNHNNKDTNLDPSSSPPAP
PAHQPXGDAYPTGQDVSTKVGLIHLSDFETRLTENQARSALLSHIASSXX
XLWKNRGKKYDH
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mRNA from alignment at LSalAtl2s170:441946..442434+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002990-698837 ID=EMLSAT00000002990-698837|Name=EMLSAT00000002990|organism=Lepeophtheirus salmonis|type=mRNA|length=489bp|location=Sequence derived from alignment at LSalAtl2s170:441946..442434+ (Lepeophtheirus salmonis)
ATGGTTTTCGGTGATGAGGGAACTGGTGGGGACGAGGATTCGACATCCAA
AAAGTATGAAAAAAAGTTTTCCTCGGACTCTGATGCAGGCTCAGAGAACT
CACAACATGAAGAGGAGGAGGACTCCTGGCCTACTGCACCTCCCCTTGAC
TACTTTGATTCCATTAAAGGCTACGAAATGGTGTCATTTGACGCCGTGAG
TGTTCCACCTCCTCCCTCAGTACTTCCTCCAGCATTTTCTCTCCTCAACC
ACAATAACAAAGACACTAACTTAGATCCGTCCTCTTCACCMCCAGCACCT
CCAGCACACCAACCAKCAGGGGACGCCTATCCCACTGGACAAGATGTATC
GACAAAAGTGGGTCTCATCCACTTATCCGATTTTGAAACTCGTCTCACTG
AGAATCAAGCACGCTCTGCACTCCTTTCGCATATTGCCTCCTCCCNNNNN
NTGCTATGGAAAAACCGCGGCAAAAAATATGATCATTAA
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