EMLSAT00000002991, EMLSAT00000002991-698838 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002991
Unique NameEMLSAT00000002991-698838
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:442439..443535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002991 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002991EMLSAG00000002991-685757Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013162EMLSAE00000013162-722090Lepeophtheirus salmonisexon
EMLSAE00000013163EMLSAE00000013163-722091Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777716auto777716Lepeophtheirus salmonispolypeptide
EMLSAP00000002991EMLSAP00000002991Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002991

>EMLSAP00000002991 ID=EMLSAP00000002991|Name=EMLSAP00000002991|organism=Lepeophtheirus salmonis|type=polypeptide|length=238bp
MEYIPAFHYELQSFSEKRETAWTYAPLGKGCLDTLGSYSSGGVTCRDCNG
KGWIRCLNCHGDGWMSDSSGFRERCFYCQHSKHGQGQQDCVKCHSKGKVN
CSTCDGQGQIRCFIQLSISWKVHTAEHIVEQLQLPHDLIRDVSGQVAFEE
EADRVTPVTAFSDDAIKEASAKIVFNTLGPEFDDHKLIRQRHQVRVVPVT
KVSYEWKGKIHLFHVYGYENKIYLPSYPQNCCWGCVLL
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mRNA from alignment at LSalAtl2s170:442439..443535+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002991-698838 ID=EMLSAT00000002991-698838|Name=EMLSAT00000002991|organism=Lepeophtheirus salmonis|type=mRNA|length=1097bp|location=Sequence derived from alignment at LSalAtl2s170:442439..443535+ (Lepeophtheirus salmonis)
ATGGAGTACATTCCCGCCTTTCACTATGAACTCCAATCCTTTTCGGAAAA
GAGGGAAACGGCCTGGACTTATGCACCATTAGGGAAGGGCTGTCTGGACA
CTCTTGGCTCATATAGCTCGGGTGGACTTCCACCTCTACCTTGGGAGATC
CAGGAAGAGCCAACGCAGGACTTTAAAGGTACTTCACTCATCTACTCCTG
AGCCAACTGTTAATATTTACTCATCCCTATTAAACAAACTTTGAAAGGTT
AAGTGTTATTTATTTTCCCCCCAATTTTCCAATGCGCATTGAACACATAA
TTAGCTGTCCATTGCTTATAAATGTAATACTCTTACTCCCTCGAAATTTG
GATAATTTAGATGAGTAAATAATAAAAGCTGGCCCTGTAAATGCATAATA
AACTTCTAGCCATGACGTTATCTTTTTGACAGATGAAGTACGACTTATTC
CCGTGCCGAATACGGCGAGCACAAAATCCTGTCATCGTTGCCGAGGTACA
GGAGGAGTCACCTGTAGAGACTGTAATGGAAAAGGTTGGATCCGGTGCTT
GAATTGTCATGGGGATGGTTGGATGTCCGATTCCTCAGGATTTCGCGAAA
GGTGCTTTTACTGTCAACATTCCAAACATGGGCAAGGCCAACAAGACTGC
GTAAAATGCCATAGTAAAGGGAAAGTCAACTGTTCGACCTGTGATGGTCA
AGGACAAATTCGTTGCTTTATACAACTCTCAATCAGCTGGAAAGTACACA
CCGCGGAGCACATAGTTGAGCAACTCCAACTTCCTCATGATCTCATCCGC
GATGTCTCTGGTCAAGTTGCCTTTGAAGAAGAGGCAGATCGTGTCACCCC
CGTTACGGCATTCAGTGATGATGCCATCAAAGAGGCATCCGCTAAAATCG
TTTTCAATACCCTCGGCCCAGAGTTTGATGATCACAAACTCATTCGACAG
AGACATCAGGTCCGCGTAGTGCCTGTGACAAAGGTGTCCTATGAATGGAA
GGGAAAGATCCATCTCTTTCACGTCTACGGCTATGAAAACAAAATATACT
TACCCAGTTATCCACAGAATTGTTGCTGGGGATGTGTTCTTCTCTAG
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