EMLSAT00000003021, EMLSAT00000003021-698868 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003021
Unique NameEMLSAT00000003021-698868
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s171supercontigLSalAtl2s171:196627..197691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003021 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003021EMLSAG00000003021-685787Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013252EMLSAE00000013252-722180Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774340auto774340Lepeophtheirus salmonispolypeptide
EMLSAP00000003021EMLSAP00000003021Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003021

>EMLSAP00000003021 ID=EMLSAP00000003021|Name=EMLSAP00000003021|organism=Lepeophtheirus salmonis|type=polypeptide|length=354bp
MNESNRMLNISNLSCVYCLNDNNVPTFKRGYLFAILISFGVATVLGNSLI
IVSVLKKRSLHTATNYFITSLAIADFLVGLVVMPFSATYEAMDQRWIFGP
DWCDIWHSMDVLASTASILNLCVISLDRYWAITDPMTYPYKMTGKRAAIL
IVLVWVCSSVISFPAIAWWRLVAENVPPEWKCPFTEDMGYLIFSSTVSFY
GPLTIMVFAYAKIYKAALEHTRSLKLGAKVLAATGGPDSTLRIHRGGGGR
DNSQKSNNNDVHCTLVNRDKNSISFSKKIMKFSKEKKAAKTLGTVMGVFI
ICWLPFFITNIISGLCSDCIANPDFIIQVVTWLGWXNSGMNPAIYAYCSK
DFRR
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mRNA from alignment at LSalAtl2s171:196627..197691+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003021-698868 ID=EMLSAT00000003021-698868|Name=EMLSAT00000003021|organism=Lepeophtheirus salmonis|type=mRNA|length=1065bp|location=Sequence derived from alignment at LSalAtl2s171:196627..197691+ (Lepeophtheirus salmonis)
ATGAATGAATCAAACAGAATGTTAAATATATCAAATCTCAGCTGTGTCTA
TTGTTTAAATGACAATAACGTTCCCACATTTAAACGGGGCTATTTATTTG
CTATTCTAATTAGTTTTGGAGTAGCTACAGTTTTAGGAAACTCTCTCATC
ATAGTATCAGTTTTAAAAAAGAGATCACTTCATACAGCAACGAATTACTT
CATAACATCCCTAGCAATAGCAGATTTTCTTGTTGGTCTCGTTGTAATGC
CATTCTCAGCAACTTACGAAGCCATGGATCAAAGATGGATCTTTGGACCA
GATTGGTGTGATATTTGGCATTCTATGGATGTTCTTGCTTCTACTGCCTC
CATTCTGAATCTCTGTGTCATTAGTTTAGATCGATATTGGGCAATCACGG
ATCCAATGACGTATCCTTATAAAATGACAGGAAAAAGAGCAGCTATACTT
ATTGTTCTTGTATGGGTCTGTAGCTCTGTCATTTCATTTCCAGCCATTGC
TTGGTGGAGACTTGTTGCTGAAAATGTGCCTCCAGAGTGGAAATGTCCAT
TCACAGAAGATATGGGCTATTTGATATTTTCATCAACTGTTTCTTTCTAC
GGGCCCCTTACAATCATGGTATTTGCCTACGCAAAGATATACAAAGCTGC
ACTAGAACACACTCGTAGTTTAAAGTTAGGAGCAAAAGTTTTAGCTGCAA
CGGGAGGACCAGACTCCACATTAAGGATCCATCGAGGAGGTGGAGGGCGG
GATAACTCCCAAAAGTCAAATAATAATGATGTGCATTGTACTTTAGTCAA
TCGTGACAAAAATAGCATCAGTTTCTCAAAGAAGATTATGAAGTTTAGCA
AGGAGAAAAAGGCTGCAAAAACTTTAGGCACAGTGATGGGGGTATTTATT
ATATGCTGGCTACCTTTTTTTATTACGAACATTATATCGGGACTCTGTAG
TGATTGTATTGCTAATCCGGACTTCATTATTCAAGTTGTAACGTGGCTGG
GYTGGYTTAATTCGGGAATGAATCCGGCAATTTATGCTTATTGTAGCAAA
GATTTTAGGAGGTAA
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