EMLSAT00000003038, EMLSAT00000003038-698885 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003038
Unique NameEMLSAT00000003038-698885
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1728supercontigLSalAtl2s1728:22097..26590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003038 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003038EMLSAG00000003038-685804Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013317EMLSAE00000013317-722245Lepeophtheirus salmonisexon
EMLSAE00000013318EMLSAE00000013318-722246Lepeophtheirus salmonisexon
EMLSAE00000013319EMLSAE00000013319-722247Lepeophtheirus salmonisexon
EMLSAE00000013320EMLSAE00000013320-722248Lepeophtheirus salmonisexon
EMLSAE00000013321EMLSAE00000013321-722249Lepeophtheirus salmonisexon
EMLSAE00000013322EMLSAE00000013322-722250Lepeophtheirus salmonisexon
EMLSAE00000013323EMLSAE00000013323-722251Lepeophtheirus salmonisexon
EMLSAE00000013324EMLSAE00000013324-722252Lepeophtheirus salmonisexon
EMLSAE00000013325EMLSAE00000013325-722253Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769551auto769551Lepeophtheirus salmonispolypeptide
EMLSAP00000003038EMLSAP00000003038Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003038

>EMLSAP00000003038 ID=EMLSAP00000003038|Name=EMLSAP00000003038|organism=Lepeophtheirus salmonis|type=polypeptide|length=526bp
MAXQHYSLRWNNHQXHVLSAFDTLLQNEALVDCTLVCEDTSVRAHKVVLS
ACSPYFQKIFTDNVCKHPIIVLKDIKGWEAQCIVDFMYKGETSVPESQLT
SLIKAAESLKVRGLTSSDQYRRRIYSPICNSNSSITSSTRPEEIQPSNKV
PHMSHPFSSTAVESRSTSPTIANSCPRRKQARPRRRSGDSIGNSSLDLSK
TERKSPTNACEDHLPENLSMKRTDSSPAINLVKTETLLEPLSREHESTDD
IKISYHSFSEKSPKYGQIQEQEARVEALQALNYMASGGGIPTHFALNTLP
SXTTNGLLSHHSVRTSTNNAYNENSEKNGFEFQRISIDRSKMSEEEAFEH
AIEMIQTRQMGFRKAADFFSVSKWKLYKTARKRGIYAEIKKQNQAQQSLS
KVPSNVQHFADMGVYKQLKKKSHLTKEIIFPHLPSDSDTMKAYKSPNNNN
NISTSNNNTDYTTNIIELQKKLFVTHHKHQQKSSETHVNEELLLEEEEEE
EGVLVINHRDCQDEDDDLDFDREDST
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mRNA from alignment at LSalAtl2s1728:22097..26590+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003038-698885 ID=EMLSAT00000003038-698885|Name=EMLSAT00000003038|organism=Lepeophtheirus salmonis|type=mRNA|length=4494bp|location=Sequence derived from alignment at LSalAtl2s1728:22097..26590+ (Lepeophtheirus salmonis)
CGATCATCGAAAACAAATTTGTTAAATCAAATTTCGTATAAAATTATATA GTTTTCAGTGCAAAGTATATTGAATAAAGGCTTGATGTAGTCGTGAGATT TTAAATTATCATTACAATTCATAGGCGAAAAATATTGAATAAGACTTTTT ATATATTCAGTTTTTTATATTCTTATATATCTCCCATTTTCTACATCTTG AATAGGAATCTAACTTCTTTGAAAAAGTGAAAACAATTTAGGGTTGTGAA AAAAAGATAATCTTTTGTCGGTATTAATAAAAACGTTGCAACTTTTTGTT ATGACATTTTGATAACTTTCTCTATTTTACCTGAGTTTTCGCTGGCGCGT TCAGGTCTAAAATTTCTTAAAATATTTTAATGATTTACATAAGAACTCAG TCGTTAATTATTGTTGGAGTAGATTATTCCAACGATCAATTTCAAGAAAA ATGGTTTAAGTGTTTGTAAACATAGTTAGTTAATTTGTTTTGAATTAAAA GTGTTCTTAGTTCATTTCTAAATAAGTGGTAAGAGTAAAATGACGTTAAT TTTTCATAATAGTAGATTAATTGAAACAGCTTACTGAATCAGACTTTATA AAATAAAAATTTTAATTAATTAATTTGAAAATGTTGCTTCTTTAATTATT TTTTAGAGTTAATATGGCTTYACAGCATTATAGTCTACGCTGGAACAATC ATCAAARCCATGTATTAAGTGCATTTGACACACTTTTGCAAAATGAGGCT TTAGTTGATTGTACATTGGTCTGTGAAGATACATCAGTCAGAGCTCATAA AGTTGTTCTCAGTGCTTGCAGGTAGATTTTTTGTTACTTTAATTCATTGA ATGGAACCAATTACTCCAAATATTAACTGATTTATAACGTATTATTTAAT GGTATAATTTCTATAGACAATGCAATATGTTTTGCTCAAAACTAAATATG ACTATCATCACATTATAAAATTTCTCTTTTATTTTTTAGTCCCTATTTCC AAAAAATATTCACTGATAATGTGTGTAAGCACCCAATCATTGTCCTTAAA GACATAAAAGGATGGGAAGCTCAATGTATAGTCGACTTTATGTATAAAGG GGAAACTTCGGTACCAGAATCTCAACTCACAAGTCTTATAAAAGCAGCTG AGTCCTTAAAAGTAAGGGGCCTTACATCGTCTGACCAATATCGTCGTAGG ATTTATAGCCCAATCTGTAATTCAAATTCGTCTATTACATCATCCACACG CCCAGAAGAAATTCAACCCTCAAATAAAGTTCCCCACATGTCACATCCTT TCTCTTCAACAGCAGTCGAATCTCGAAGTACTTCGCCAACAATCGCAAAC TCCTGCCCTAGAAGAAAACAAGCGAGACCAAGGCGTCGATCAGGTGACTC AATTGGTAATTCTAGCTTAGATTTATCCAAAACGGAAAGAAAGTCTCCAA CAAATGCTTGCGAAGATCATTTACCCGAAAATCTTAGTATGAAACGTACA GATTCGTCYCCAGCCATTAATTTGGTAATAAAATTGAACTTAATCGGTTT AATATGTAAAATTTAATCATACTTTTTATTATTGTCAGGTGAAAACAGAA ACCCTCTTAGAACCACTTTCACGTGAACATGAAAGTACAGATGATATTAA AATATCTTACCATTCATTCTCTGAGAAATCGCCTAAGTATGGGCAAATTC AAGAGCAAGAAGCACGAGTTGAAGCCTTACAAGTGATATTTTTGAATATA TTTAAACGTTGTTATATTTAATATTATTTTTTTGGCAGGCACTAAATTAT ATGGCATCAGGTGGTGGAATMCCTACTCATTTTGCTTTGAATACACTTCC GTCTMCTACCACTAATGGCCTTCTTAGTCATCATTCAGTGAGAACGAGCA CCAATAATGCATATAACGGTATTTATTCAATATAATTGAGATAAAATGTT ATATTCCATAAACATAAAAATAATTTATTTTATTTTTACAATTTAACTTA ACATTAAAACTTTTTTAAATAATTATTGCTGTACAGAAATTTTTCTTTAT ACAAACAATTTATAAAAACATTTCATGGTGTATATTATTTAAAATATTCT AGCTATATTTTCCCTTTTTCCATTTTGTAATTAGTGTCTATTATATTTAC AGTTTATTAGGTAAATAATTATATTGAATCTAAGCAGATATCTTGATTAT TTTCATTTGATTATTTGGGAAAATACAAAAACTAAGCTTATGGCTTCTAA TTGTAAATGTTGTAGTTTTTCTATCATGTTATAGGGTCAATAATTGTTAG AACATGTATAAAAGACAGGAATACAATTTCTTGTTCATCCCTGGTTNGTC TATTATATTTACAGTTTATTAGGTAAATAATTATATTGAATCTAAGCAGA TATCTTGATTATTTTCATTTGATTATTTGGGAAAATACAAAAACTAAGCT TATGGCTTRTWATTGTAAATGTTGTAGTTTTTCATCATGTTATAGGGTCA ATAATTGTTAGAACATGTATAAAAGACAGGAATACAATTTCTTGTTCATC CCTGGTTGTATATATATATATATATTGGACATCTTATTATTTATAAGAAT ACATTTTGGCTATCATGTAAAAATACTAATGTTTAGTTACACTTTTAATA AAATATTACTAAGCAATCTTATATAGAGTATCGAATAAAATTTTATGTAG GATTTTAAAATTAATAGAAAATAATGATAGTCTGGGAGTACTTAAGAGAT AAATAGTAGTTGGTGTGATTCACCTATTCGGCTAACAACCTGAGGATTTG TGGCCTTTTTTCTGTTTCTTCTTTGAAGAAAGGTCGCGGGATAAATTAAA GGTAATAACCATAACAATGGAAAATATCGATGATTATTTTACAAAAACTA ATATTGATGCTAAATAGTTAAGGTAATGAGTAAGTAGTAAAATTAAATTT TATGTCTCAACTATAATATAAAAAACCAAGTTATTGTAATAATTTTCTTT AAATAAAATAAGTTGATTATTTAATTAATATATACAATGTTGAATAAATA GTAATACACCAACAATAAATATTTTATCAATAATTTGTAATTGAGTCTTG TATATATTAAAACTCTGAAAATTTACATGCAGTCTAAAAATATAAGGCAA TAGTGTAAGGTCATATTACTGTTATTCCAGAGAACAGTGAAAAGAACGGA TTTGAATTTCAACGCATATCGATTGATCGATCTAAAATGTCTGAGGAGGA AGCCTTTGAACATGCTATTGAAATGATACAAACTCGTCAGATGGGATTTC GAAAAGCAGCTGATTTTTTTTCTGTATGTAGTATTAAAAAAATATTTTTA ATCTATATTATTTAATACATAGGTATCTAAATGGAAGCTCTATAAAACTG CAAGAAAAAGAGGAATTTACGCGGAAATAAAAAAACAAAATCAGGCACAA GTATAATAAAAACACTTTATAATATCAAAAAATAATTAACTTTCATATAG CAATCATTATCAAAAGTGCCTTCTAATGTTCAACATTTTGCCGATATGGG AGTATATAAACAATTAAAGAAAAAATCCCATTTGACAAAAGAAATTATTT TTCCACATCTTCCTTCTGACTCTGATACTATGAAGGTGAGTGGCACACTT AGGCTTAATAGAAATATCCCAAAATTCGATACATTTAATCAAAAACTCCA TTAAAGGATTTAAATTTCATTTTATGTTTTTATTATCTAGAAATATAATT AGGAAAAATCATTTCTACCGATCAAATCTAAACATTATATGTATTTTTTT TATTTAATAATTTAAGGCTTATAAATCCCCTAATAATAACAACAACATTT CAACTTCAAATAACAATACCGATTATACAACCAATATAATCGAACTTCAA AAAAAATTATTTGTAACACATCATAAACATCAACAAAAAAGTTCCGAAAC ACATGTAAATGAAGAGTTATTATTGGAAGAAGAGGAGGAAGAGGAAGGAG TTCTTGTAATTAATCATAGAGACTGTCAAGACGAAGATGACGACTTGGAC TTCGATAGAGAAGATTCAACCTAATAATTGATCAATATCAATTCTTGGAT TTATTTTGAAGTATTTTTTGTTATTGTAGATAGATTTACAATAATAGTTG CTTTTAGTACAAAGAGAAAATATTTTCAGGATTACTGTATGTACTAACCT ATGACCATTATGTGGTTCAAATTCCATGAAAGTTGCTCATTCATTTTCAT ATTGGTGTTAATATTTATTTTATATTTATTATTGATTTGTTAAGTTTTTT TATATAACTAGTTTTTACTATTTGATATTCTTTTAAAAAAAAAATATATA TATGAAAAATATGCTTAAACTAAAGCATTTGTGCCTCTAATTATTCAGAA AGAATGTAAGAAAGAACAACAAAAAATAATTTCTACTCAAAATATAAAAA TTGTTGCCACTAATCACTATTTATCAAATATTATTGTAAACGAA
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