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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s173 | supercontig | LSalAtl2s173:1463937..1472697 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003076 >EMLSAP00000003076 ID=EMLSAP00000003076|Name=EMLSAP00000003076|organism=Lepeophtheirus salmonis|type=polypeptide|length=1176bp
MPPPCKRPPEDKDRQFIIGKRFQSKHRKEKGHNPSIIMATETWSHGSIVK
VYMKDFMQYGEATFEPGPCLNVILGPNGSGKSTIVNAICLGVGGKAKFLD
RAKDPREFIREGTESSELKIELFNDSGSNWTITRKWSTRDSRTHWLLNGA
SVLQKNIEALTKELRIQVENLCQFLPQDRVQGFSKMDAKTLLDSTIEAVG
EDALKQKHERLKLLQKEYEEFEDQYRSKQELLAQSKSQMERMDGDVKNYH
EKQKVDEKIGLYKKKRVWLLYAQKKEEVREMDEEKKTIEASIKKQENTEI
KPVRNSINKIKSSIETVDNEIRKKLENIRSHVNESKNYSNKIENLQVEYS
NCDLVLEEFLSRVSERESKIESIQKEINNLKSMANDEQEEEFKREFHEAN
QELISIAQEESNLEINIKSVDRERDRLDREISLKQEEIKRLNDVGSLKIT
KLQSSFADGKEAVSGLRWLKSMSLRGKFYDPIILTINVYDPSHAFYFENS
INIRDLVAFGAEETEDVSEILRFLRKEKNLKVNVIHMSPNVNMNSFQPRI
PPESFPPEYNFKGYLSDLFDAPLPVKAYLLKQYQFHNTAVFGSVKPSIIN
KIVHELKISAFFCGKRTTNIIRRLIELNKSLFHGIQKHGNAKIALDLEKM
KSQPLSDQLKSEQIKLQELENSIECLRTEIDAKKAEAKKCMNEANEYLLE
LEKLTGNRRISEELKGLWEEHDVPNDVDKIEEDIDGLETESACIGNINRS
VVEEYLRLKETVTYLEDNISTKETETNNRREDIESLKSEWIGRLTTLVDN
LDSKFRSNFDYMGYAGQIQLKVPDERNNFNDDYGIEIYVKYRENVRLAKL
TPHLQSGGERSVATALYMMSLQELTIVPFRCVDEINQGMDATNERKVFDI
LINTSSREDRSAQYFLLTPKLLPDLSYNEMLRMKLNVSYPRTGCQKLFEI
NDEHKVRPFYEKRMGQEVEANSLGEEWKDYVFRITGGNDKQGFPMKQGVM
TQGRVRLLLKKGHSCYRQRRTGERKRKSVRGCIVDSNLSVLSLAIVKKGE
KEIPGLTENIVPRRLGPKRASKIRKLFNLTKGDNVCQFVIKRPLPVKDGK
KLKYKSPKIQRLVTPTVLQRKRHRVALKRRRTEKNRQAAAEYAKILAQRQ
KEAKEAKELRRKRSASIRETRNSTHK back to topmRNA from alignment at LSalAtl2s173:1463937..1472697+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003076-698923 ID=EMLSAT00000003076-698923|Name=EMLSAT00000003076|organism=Lepeophtheirus salmonis|type=mRNA|length=8761bp|location=Sequence derived from alignment at LSalAtl2s173:1463937..1472697+ (Lepeophtheirus salmonis)
CTAGCCTCTGTGGTCCCCTATTTTTTTTACAATGGGACACGGGTCTAATG
CCCCCGCCCTGTAAACGACCCCCTGAGGATAAGGATCGACAATTCATAAT
CGGGAAAAGATTTCAAAGGTATAAAAATATAGTAAGAGCTGGAAAAACTT
TCAGAAGGGGAGTAGCTACAGAATCATGGCCCGTGGGTTGTTATCGACAC
TTTAGAGATTCATACATTGGGATCCACAATTTGTGGACAATTGTTGTACG
TAAGATAATAGTAGAACAAGAGACATGGTGACGTCATATTGTTACAATAT
GACGTCACTTTAGCGGGGTTTTTTCCCAGCTATTCTCTTGACTATAACTA
TTCTATTCAAAATCTGAAATCAGATCAAAACACGGTGAATGAATCCGCCG
TTCACGGACAATCAATGAAGTACTTAATGACCGAAATGCATCTTCCTCGT
TGAATTTTAGTAAACATAGAAAAGAAAAAGGCCATAATCCATCAATAATC
ATGGCAACAGAGACATGGAGCCATGGCTCAATTGTTAAGGTTTATATGAA
GGATTTTATGCAGTATGGTGAGGCGACATTTGAGCCAGGGCCTTGTCTAA
ATGTGATTCTCGGACCAAATGGAAGTGGTAAATCAACCATTGTGAATGCT
ATCTGCTTAGGTATTAGTTATTATTAATATTCAAGTTTCCATTCTCGTAT
CTAAAACGGTCTTACTTTTTTTTAGGTGTTGGAGGTAAAGCCAAATTCCT
GGATCGGGCCAAAGATCCACGGGAGTTTATAAGAGAAGGGACTGAATCAT
CAGAATTAAAAATAGAACTCTTTAACGACTCGGGTTCTAATTGGACAATT
ACGAGAAAATGGTCGACCAGAGACTCACGTACCCATTGGTTATTAAACGG
CGCATCTGTTCTACAAAAGAATATTGAGGCACTGACAAAGGAGCTCCGCA
TACAAGTGGAGAATCTGTGTCAATTTCTACCTCAAGATAGAGTCCAGGGG
TTTTCCAAAATGGATGCAAAAACCCTGTTGGACTCCACCATTGAAGCAGT
GGGAGAGGATGCTCTAAAGCAGAAACATGAAAGGTAGGTTCATTGATTTT
GAATAGTCTACATTTGTCATTTCTTTTTAAATTTCCCTCATGACAGATTG
AAGCTATTACAAAAAGAGTATGAAGAGTTTGAGGATCAATATAGGTCCAA
GCAAGAGCTTTTAGCTCAAAGTAAATCTCAGATGGAACGAATGGATGGAG
ACGTGAAAAATTACCATGAGAAGCAAAAAGTGGATGAAAAAATCGGGTTG
TACAAGAAAAAAAGGGTTTGGCTTCTGTATGCACAAAAAAAGGAAGAAGT
TCGTGAGATGGATGAAGAAAAAAAGACGATTGAGGCCTCGATTAAGAAAC
AAGAGAACACTGAAATCAAGCCAGTGAGAAACTCAATCAATAAAATAAAA
TCATCCATAGAAACTGTCGATAACGAAATTCGAAAGAAGCTGGAAAATAT
CCGAAGTCATGTAAATGAATCGAAAAATTACTCTAATAAAATAGAAAATC
TTCAAGTTGAATATAGCAATTGTGATCTAGTACTTGAAGAATTTCTTTCT
CGTGTATCTGAGAGGGAATCTAAAATTGAGAGCATTCAAAAAGAAATAAA
CAATTTAAAGAGCATGGCCAATGATGAGCAAGAAGAAGAATTCAAACGTG
AATTTCACGAAGCAAATCAGGAATTGATAAGTATAGCACAAGAGGAGTCC
AATCTTGAGATCAATATAAAAAGTGTTGATAGGGAACGAGACCGTCTTGA
TAGAGAAATTAGTCTAAAACAAGAGGAAATCAAAAGACTCAATGACGTAG
GGTCTCTCAAGATTACGAAGTTACAATCTAGTTTTGCTGATGGGAAAGAG
GCTGTCTCAGGTCTTCGTTGGTTAAAATCCATGAGCCTTAGAGGAAAATT
TTATGATCCTATCATATTGACCATCAACGTATATGACCCCTCTCATGCAT
TTTACTTTGAGAATTCCATAAATATTCGAGACTTGGTAGCTTTTGGTGCG
GAGGAAACAGAGGATGTAAGTGAGATCCTTCGATTTTTACGAAAAGAAAA
AAACTTAAAAGTGAATGTGATTCACATGAGTCCTAACGTAAATATGAATA
GCTTTCAACCTCGAATTCCACCCGAGTCCTTTCCTCCAGAGTATAATTTC
AAAGGGTATCTTTCGGATTTATTTGATGCACCCCTTCCAGTTAAAGGTAT
TTTATATCAAGGTTTTAAGATATATGACCCATTTCTATGCTTAATTCATT
TTAATTTCAGCATATCTGTTAAAACAGTATCAATTTCACAACACGGCTGT
CTTTGGATCCGTTAAACCTTCCATAATTAACAAAATAGTTCATGAACTCA
AAATAAGTGCATTTTTTTGTGGAAAGAGAACGGTATAATACAATTGTCTC
TGCATATACGTCCGAATGCTCCTCAACGAGTTTCACTGCTCACCCTCGCA
ATTGGATTCAAATGAGTGTTGATAGCTCAAGGATCAAGGTGTTGGAAGAT
GCTAGAAGACAATTAGAGGATGATAAGCTAAGAATACTTGATTCTACTCG
ACAAGATCATCAAAGTTTAAAAGAGAAAAGAAAGATGAAAGAGGAAACTA
CGGAGAGGGTCTCGAAGCTTAATCAAAAAATTAAGTTACATCAAACAACA
TCGGAATAAACTAAGAATGAAGGAAAAAAATACTCGCTGCACTAATGGAT
AATAGTGAGGAGAGCTCAGAGGAAGAAAGAGTTCAAAGGGAATCCCGTTC
TCAAAAGACTAATATCATTCGACGATTAATTGAATTGAATAAAAGTCTCT
TTCATGGGATTCAAAAGCATGGGAATGCAAAAATTGCTCTGGACTTGGAA
AAAATGAAGTCACAGCCCTTATCGGACCAACTAAAATCTGAACAAATAAA
GCTTCAAGAACTTGAAAACAGCATCGAGTGTTTGAGGACTGAAATTGATG
CAAAAAAGGCTGAGGCGAAAAAATGCATGAATGAAGCTAATGAATATCTT
CTGGAATTGGAAAAACTTACTGGGAATCGTCGAATAAGTGAAGAGCTAAA
AGGGCTTTGGGAAGAACATGATGTGCCGAATGATGTTGACAAAATAGAAG
AGGATATAGACGGACTGGAAACAGAGTCTGCTTGCATAGGAAACATAAAT
CGGTCTGTAGTGGAAGAATATTTACGGTTAAAGGAGACTGTTACGTATTT
AGAGGACAATATTTCAACTAAAGAAACCGAAACAAACAATAGACGAGAGG
ATATTGAGTCTCTAAAATCAGAATGGATAGGAAGACTTACTACTCTGGTT
GATAACTTGGATTCAAAATTTAGATCCAACTTTGACTACATGGGATATGC
AGGACAAATACAACTCAAAGTTCCTGATGAAAGGAATAACTTTAACGATG
ATTACGGTATAGAAATATATGTTAAATATAGAGAAAACGTTCGACTTGCT
AAACTAACTCCTCACTTACAATCTGGTGGGGAGAGAAGTGTTGCAACTGC
TTTATATATGATGTCGCTTCAAGAATTGACCATAGTCCCATTTCGATGCG
TGGATGAAATAAATCAAGGAATGGACGCTACCAATGAAAGGAAGGTTTTT
GATATCCTTATTAATACCTCAAGTAGAGAAGACCGCTCTGCTCAGTATTT
CCTCCTCACGCCCAAACTCCTACCAGACCTCAGCTACAATGAAATGGTGA
AAATCCACGTCGTATATAATGGAACTCACATGCTTCAATATCCAGGTATG
AGTGCTGGGAAGTTTCTGCAGAAGGCTCTTCTTCAAAGAGCATAAAGATG
TATTTTTCTTTAATTGTTGACAGTTTATTATTGATATTATTATAAATCAG
AGTATACATACGATAAATGTATAATGTATAGTTATTTATTGAAGTTTGAT
GATCCTAACTAACCTTTAAAAATTATATTTGGTCTAGTAAAAAAAAAAAA
TTAGCCATTGGTTGAATACATGATTATCACTCTAATGATGTATATATTAA
TTTAAATAATGTACTTTATAATGATATTAGAAGAAAGAGAGAGAGAGATA
GGGCTCTACTGTACTAAATATAAAAAGGTTCTTTATCAAGTCGTCTAAAA
TACAAAGCCCTTATTTTCAAAATTAATCTTTAATTAACAATTTTGTGAGA
TTTTTTTTCTTTTTCTTGAAATACTTTCTAACTCGTGTACGCAATCACTG
ATGAAATCATCATGATCCAAACAGAATATTTAATTATTGCCAATACCCAG
AACAGGCGTCCTTAGGCATAATATGGAGGCTTGCGAATAACGATTCCTTG
ATCCCCTAAAGCAAGACCAAGATCTTCACACGTCATAGTATATCTTCTAT
CCCCACCCTTTTTGGGATMTTTTTCCTTTCCKCCTCCCCCTCTCATTTTG
CAATGTTGAAGAGCATCGTTGGCTKCATCCGATATGAACNTTTTGTGCTG
CAAGGGAGATAAGTCGTACGATCCTGGGATCATCCGTCTCAAATCCTGCT
GATGATAAATAGTGTTGAGTTACAGCATCTGGGATGGTAGGTGTATAGTC
CTCCAATTGCATGAGGAAGTCTGAGATGGGAGGTCCTTGAGTGGTAAACT
GTGTATTGCTTGTAACTCCATTTACGGGCCCGTTAGAAGGGGGATTGAGT
CCATTCAAATTATTTGACATGCTAAAACGATAAACAAAATATTGAATTAA
GCATAAAAGACAAACAAACATATATGCGAACAAGGAATCAATCACAAATT
TTATTCATAAACAATAACGACTTGATAAAATATTTAATTAAAAAAGAAAA
GCAGGTCAAACAAGTGGTATATTCCACAAACACTTGTTCTTAATTAATTT
TTATAAATTGAATGTTTTTTTCAACTGCTGAATCGTGTCCTCCGGAGAAA
TGACTGTAAATCCCTTGGTCCTTGGGTCCTCAAAGATTTCATAATCGTTT
CCACCAGGAGATGTCTTATCACCGAAAAAATAAATGTCTTTAAAACCATC
CATATCACAGACTCTTTTTAAACAAAATCGTTTATCCCAATTCTCTGGGA
AGACGTCAATAGAGATTTGCCCTCCAAGAGAGACTTGAATTCCCTTGAAT
CGACTCATGAGAGCATTTGCTAGACCCTGGCGAATCCCTTCTTTTTTGTC
TAGCTCAAAGAATTGAAGGCGGTGTTCATGGGAGACGGAGCGACCAGGGG
GAGATATGTTGATGAGTCCATTTCGGAACTCTACGAAATTTCCTCTTTTG
ACGGGAAGGCGAATTTTAGAGAGATAATCCAGGGCAAAGTTGATTATGTC
TGAAAGAAAAAAAAGGAGTACAAATGAAGGAAAGGCTTTTCAAGTGGATC
AACTACAAGACCTTGACATTTGTCCTCTCCAAGGGCATTGGAAATGGACT
CTTTCGTCACACATTCCCCATTTTTGTAGCCAACGAGTCCATTTTCAGCA
AAAACATAGTCCCATGAGGTAATGAGTTTTGATTCGTCCCCTTGAGCGAT
TTGCTCGGCTATTTTAGACAAATCCGATCCTCCCACGATCCCTACAGTAA
ACTCCGGCTTCAAAACCTCATCATAAAAGGATTGTGTCTCTTTGGTGATC
GTTAAACGACTTTGCGTCAAAGTTCCATCCACATCAAAGAGAATCAAGGT
GCTCTTCCGACTCATTTTCAACAGACAACGATCTCCTTACAGTTGACACC
CAATTGACAAACTAAGCCACTTATGAGTTATGAAAGAACTACGTAAGAAT
AGCGGGAGAGCTGAGAGAGCTCTGCTCTCACTTTGACTTCATAAGGATTG
TAATGCGAGCGATTCCATCCAAGCTCTACTATTAAAATACGTACCTGTGC
TCAAATTATTAATGTTATTAAATCATCATCAATATTATTTTATCACAATT
ATATTACGCTGGATGACGTCATGAGCATCTTGTATAACACGCGTCAGCTA
CATCCATTATAATTCATACAGCTAACTCTAGCATTTAGCTAATTCCTCGC
TTCATCTAATATCCATCGTTAGTCAGGAAGGATTTTCAGTTCTCATCACT
GAAAGTTTTCTAGCGTAGAGTAGGACGTCATTGGGACCCACAAAAAAGGA
ATAAACTATTCATAATAATTGAAAAGCCTAAATTTATTGGTAATAATTAA
AGAATCAATGAACAAAATAAATTTAAATGACTCCATTCAGTATTTTTTAT
GCAACAAACTTACAGAAACAAATGCGCCCAACGACGTCACCAGAAACAGA
GGGAATGAATTTATAAATCTGCTGCGTTTGCCCTAGGGTTTCCTTGTTGT
CTAATCTTTTCCAAATATAACATTGATTGTTCATCCCCTTTTATCAAGTG
GGGATTTGCTTTTCTTCATCATATATAGTAGATATTAACTGAATATACTG
TATTAATGTCATATTTTATCAAAAGCGCAGCAATACATTCGCAAATACTT
AGTGAATGTTCAAGATGGCTAGTTGTATCCTGCTAACATATACACAGCGT
GATGTCGCCAGTAGCAGAAGTACCATATCTTCCGTTAGATACTAATATAG
TAAATCCACTCTTAATGTTTATAATGCATAAATAAATTGATTGATTAGGT
ATAATGAAAATGACATTTTTAAGTCATTAATAGAAAGCAAGGACAATTAA
GTCTTCATATTAGAATGAATGATAATGCTATATTATGCATGAAATATGTG
AAAAGGCCAAAGTTAGCTATAAAAAGCAGTTGGTAATATTGATGACAGAG
GCGGAAGCTCAACTAAACTTCCTTTCTGCACGTGAACCCCTTGGCGGTGA
GACGTTATTTCTTTATATACTATATATTTACCTTATGTGAATTTGTTTTA
TATATCTTTAATTATAGCTAAGGATGAAGCTGAACGTGTCTTATCCCCGA
ACGGGTTGCCAAAAGCTCTTCGAAATAAACGATGAACATAAGGTGAGTTA
GTCCGAGGGGAGGGGGTGAATGGAAGTCCTTATTTATGTATGATTGTAGG
TCCGACCTTTTTACGAGAAGCGTATGGGCCAAGAAGTTGAGGCCAACTCT
CTTGGAGAAGAATGGAAGGACTATGTCTTTCGCATTACTGGTGGAAACGA
TAAGCAAGGTTTCCCCATGAAGCAGGGTGTTATGACCCAGGGTCGCGTCC
GTCTTCTTTTGAAGAAGGGTCATTCCTGCTACAGACAGAGACGGTAAATA
TTCCTTACTGTACTGATGATTGGCGGTCATTGATTGTTATGTTTATAGGA
CTGGAGAGCGTAAGCGCAAATCCGTCCGTGGTTGCATCGTGGACAGCAAC
TTGTCTGTTTTGTCCCTTGCAATTGTCAAGAAGGGAGAAAAGGAGATCCC
CGGTCTGACCGAAAACATTGTCCCAAGACGTCTTGGACCCAAAAGAGCAT
CCAAGATCCGCAAGCTCTTCAACTTGACCAAGGGAGACAACGTCTGCCAG
TTTGTGATCAAGCGTCCTCTTCCAGTTAAGGATGGAAAGAAACTTAAATA
CAAGTCTCCCAAGATTCAACGCCTAGTGACCCCTACTGTCTTGCAAAGGA
AGCGTCACAGAGTCGCCCTTAAGCGCCGTCGTACTGAGAAAAATCGTCAG
GCTGCTGCTGAATATGCTAAAATTTTGGCTCAACGTCAAAAGGAGGCAAA
GGAAGCGAAGGAACTTCGTCGTAAGCGCTCAGCTTCCATAAGAGAAACCC
GTAACTCAACCCACAAATAAATATATAAGCGTCTCGTATGTTTTGTTAAA
ACCTCAGAACGTTAATAAAAACGTTAAAAACAGCATGGATATCCTTCTAT
TTCCTTTGCAACAAGTGTCGTGCTCATTTTTGCTTATTAAGTTGGCTCTG
CTGTACTTAATTTTGTTGGTGGTTTTATTGTTTGAAGTTCTGATAAAAAT
TCATGAGTTGTCGAGCACGTGTCTAATGGTACTATGGAATTTTAGTTTAG
TTGTCCGAATTATTCATTAAATTAAGTTAGATTCAAAGCCTTCTTAAACA
ATGGGGGTGTGGATTTTATGATAGGACATTATTTGTTGGTTTTTTTAGTG
ATAAAAGTACTAACATATATGTATTCTTGAAGAAAACCTCCGTAATTTTA
TTTGTAACTATTTTTGAATAGCTTTGTTTAATTTTTTTCGGGTAGATTCA
ACTTTGGACCGAACTGCTTGGTAGCAGTTTTTGGTTAATATATATATATA
TATACAGCTCAATAATCTATGTACATATTTCGGTTAACTATAGGCTTAGT
ATTCATATTTCTGGGAAGAGTTGAGATACTCGAGAAGGGTAACTATAGGT
TAGAGCCTACGTTTAATTAATGCGATGGTGTATGGCACCGATAACTCTTT
ATTATGTTATTATGCGAACTGCGGAAACAGCTACGTCTGTACGGGAACAA
ATTCAGTACATTTTATGTATTTTTCCCATAATGCACTATTATAAAATGGG
GAATCTTGCTTAAGTTGTCGCCGAAGCTAAGTGATCACTGTTTCAGTTTC
CTTTTTGCCTAACCGCTTAATACAGGTTTGACTCTATTTGCGTTCTTGCG
CCTCTGCATTTGGGGGCATTGGTCATAATGAGAAAAACTTTTAAGTTTTA
AGTTCATGGGATAATATTATATTGCTGAAATGGTATTAATTGATAAAAGG
GTATTTTCTGATGAAACAAAAGGAGAAACTTTCTTGTAACTTCAACTTTT
TTACTGATTTG back to top
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