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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s173 | supercontig | LSalAtl2s173:1520085..1527818 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003084 >EMLSAP00000003084 ID=EMLSAP00000003084|Name=EMLSAP00000003084|organism=Lepeophtheirus salmonis|type=polypeptide|length=1930bp
MPGHVKLGKPGEPDPDPAPFLVVSMEMKREDMLKPYDPKKSVWVPDGKGG
YIAGLLESSSGDKTTVALGHEKKTFKSEEVGQVNPPKFEKCEDMANLTYL
NDASVFHNLKTRFQAKLIYTYSGLFCIVVNPYKRYPIYTARVVKMYLGKR
RNEVPPHLWAITEXXYRNMLQNLKNQSMLITGESGAGKTENTKKVISYLA
MVASSGKKTSTKKVSLEDQIVATNPILESYGNAKTSRNDNSSRFGKFIRI
HFTSSGKLAGCDIESYLLEKSRITQQQEVERSYHIFYQLLQPFVPDMKSK
CCLGDDIYDYSYVSQGKVTVASIDDNEELEYTFSAFDIIGFGEQETWECF
QLTSAVMNMGEVHFKQKGRDDQAEPDDMTYPNKIGELMGVNADELMKSFC
KPKIKVGTEWVTKGQTCNQATNGVGGIARAIFDRLFKWLILKCNDTLIDR
SMKKSNFVAVLDIAGFEIFEYNGFEQISINFVNEKLQQFFNHHMFVVEQE
EYVTEGIDWAMVDFGMDLAAAIIMFEKPMGIWAILEEESLFPKATDKSFE
EKLKAQHLGKSXPFAKPQSKTDKNAHFAIIHYAGIVSYNVTGWLEKNKDP
VNDTVVDVLKRASNELLVFLWREHPGQSNPPDDKGKKKKKGGGGKTVSSV
YLVQLSELMHTLHSTEPHFIRCIVPNTHKKPIEVEPPLIMHQLTCNGVLE
GIRICMRGFPNRMLYPEYKSRYQILGASEIATASDNKTGVTALMNKISFD
CEKYRLGHTKVFFRAGALAALEEARDEIVLKLVRWMQGEIFGNVKRKEYK
KKFDQRELLKVIQRNFRKYQVLRNWGWFIMIQKTRPLIGQVNIEEELRLL
ETKANDAFGAYQEALNVTKDLEXANIQIDEEKKQLTKQLESEQGNLSQYQ
DRQTKALKLKVSADSDLVVAQQNLAKAEQDRIEMTADRKKLEGQVGLVKK
DIEDLELAIQKVEQEKTNRDHILHTLNEEVAEQDEVINKLNKEKKHIADN
QSKASEDLVQADEKVSHLNSIKAKLESTLDELESSVDREKRTRAEIEKSR
RKVEGELKICQESVSDLEHSKKELENCILRKEKDASSLNHKLEDEQSIVS
KLQKSIKENQGRVEELEEELEAERQARAKAERQRSDLARELEELGERLDE
AGGATSAQMELNKKRENEVNKLRRDIEEANIQQESILSNLKKKHQDAIQE
MTEQIDQLNKMKSKIEKDKTKIQHEIADARAATDEICRAKASSEKSNKNL
ICQLNDVNKKVEEANMTLGDFESHKRKLAAENGDLLRIAGDINNNVNMLQ
KMKFSLQSALEDAKHNADDEARERCLLLGKFKNLEHEVDGLRENLEEEIS
ARDDLNRQINKCEGEANLWRTKYESEAVAKAEELEMSKMKLQARLTEAES
TIENLNCKLSQVEKSKGKLHLEIEEMSISLDQAQILNNQMEKKARQFDKI
VQEWKGKVDGLSMDLDVSQKECRNASSELFRVKSAYEESVSQLDEVRREN
KTLSNEIKDIMDQISEGGRSIHEIDKIRKRLEAEKIELQAALEEAEGALE
QEENKVLRAQLELTQVRQEIERRIAEKEEEFQGIKKNQGKAVEGMQAALE
QESKGKAEALRMKKKLESDVGELEMSLEHSNANNLETQKSIKKYQQQIRE
NQSKLEDEQRAKENARDALVVSERKSHAMQNALEEARTLLEQADRNRRIN
EQELSDVNESLSDATVQNQAIAAAKRKLESEMQTLQADLDEMAVEARLCD
EKASKSMIDAARLADELRSEQDHAQSLEKSRKLLEAQAKDMQTRLDEAES
NALKGGKKAMNKMETRIRELESEMDAENRRLADSQKNLRKSERRIKELTF
AGDEDRKNHERMQSLIDQLQGRIKSYKKQIEEAEEIAALNLAKFRKTQAV
LGDAESRADISEQALAKAKVRGRSVSIGPQ back to topmRNA from alignment at LSalAtl2s173:1520085..1527818+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003084-698931 ID=EMLSAT00000003084-698931|Name=EMLSAT00000003084|organism=Lepeophtheirus salmonis|type=mRNA|length=7734bp|location=Sequence derived from alignment at LSalAtl2s173:1520085..1527818+ (Lepeophtheirus salmonis)
AAAAAGCTTGCCTATAGTCTGCTTTGATTTTTATTGAACATATATAAACC
CCTGGCCTTTCATTACAGGCATCAGTCTTCTTTTTGTTGACTTCAGTGTC
CAAACGAAAAAGGTAAATCAATATTTTCTACTCAAAATCATTTCTTACAC
TAGAGRAAAGAATTAGATTTATTTAATCCATTATTACTTTACTTTTGGAA
AAATTAAATACATAGACAAATTAAATTAAATTATTACTTATTTTGAAAAG
TTATATTTTTATTAAATCCGTTAAAAAACTGTTTTTTCCGTAAAATTTTC
TTTGTTCATCTAATTATCTACGTTATTAATGATTCATATCTTTTTCATGT
ACGATAACTCAGCATTCTAAGTCAATATGCCCGGTCATGTAAAACTAGGA
AAGCCCGGTGAGCCGGATCCAGATCCAGCTCCCTTTCTAGTCGTCTCCAT
GGAGATGAAGAGAGAGGACATGCTCAAGCCCTACGATCCAAAGAAGTCTG
TCTGGGTCCCTGATGGCAAGGGTGGATACATTGCGGGTTTACTTGAGAGT
AGTAGTGGCGACAAGACCACTGTTGCCCTTGGTCATGAGGTAATTAAGCA
CGTAGCCATTTAAAGAGGAAATTCATTATGTGCTTGGTGCAGATTCTATT
TTGCTCTCTGTGTGCTTTCATTCTTTTTGAAAAATGAGGTTCCATTTTTG
TTTGCTGGACTCAAACACAGATTTCATGTCATAATTGCAAGGACATTTTT
GGTTGAGCAACAATTATTAAAATACACTTTTATCAGCAATATTATTAGTA
TGATGACATGAAAACAATTCCCGCAAATTGCAATTTTTCAGAAATGTAAT
TTTGATATTGGAAAAAATATTAAAATATTTTTTGTTTTTTTTAATTAATT
GTTTTATCACAAAAGTTGCAAATGTTTAAAAAAAATCCAGAAACATGTTT
TCTTCAATCAATTAAAAATACTTTTTAGAAATAGACCATTAAAATAAAGA
AGAAAAAAAACATTTTAAAAAACAGAAAAAGTTTTTACCTAAATAAATGG
TTATATCACAAAAAATGCAAATATTTTATAGGAATGCAATATTAAAATGA
AAAAAAAAAGAAAAAAAACTTTGCAAATGAACAAAAATCCAGGAAAGTTT
TTAATAAAATTCTATAATGTTATGAAAGAAACTGCAAATATTTTTTTGAG
AAATCATGCTAAAATGAAAAACAACCCCAAAATATTTAAAATATCATAAA
ACACACACTCAAAATCATTTTTCCCCCCTTTAAAGCTTATTTTTTGGCTC
TACAGCAACTCAATATTTACTAAAAACCCACTTTTTTCTTTCTGACTGCT
TAGATTCATTGGTAGTCTAAGTGTTCTATTTTAATACACAAGTGTCAAAC
ATGGTTGAATAGGATTTTCCTCTTTTTTATGATAAGCAAAATATTTAGCT
TACAAGTTTACATTATCTCAGTGATAATTTTTATATGACTAAAAACCCTT
CTACATAGTAAAAGGACACCATGCACTTTTTTGTTACAAATAATGTGTCA
GTGGCTATTGTTGGACATAATATCTGTACCAAGTTATGTGGTGTTGTAGT
TTTTATAGAGATCCTAATGTTCCACTTTATTACCCATAGAAAAAAACCTT
CAAATCTGAAGAGGTTGGACAAGTCAACCCTCCCAAGTTCGAAAAGTGTG
AAGACATGGCTAACTTGACTTATCTCAATGACGCCTCTGTTTTCCACAAC
TTGAAGACCCGTTTTCAAGCCAAACTTATTTATACCTACTCTGGTTTGTT
CTGTATTGTTGTCAACCCCTACAAAAGGTACCCCATCTACACTGCAAGAG
TCGTCAAAATGTACTTGGGTAAGAGGAGGAATGAAGTTCCTCCCCATCTT
TGGGCCATTACTGAGKCTSCCTACCGTAACATGTTGCAAAATCTCAAGAA
TCAATCTATGTTGATTACTGGTGAGTCTGGAGCAGGAAAAACTGAGAATA
CCAAGAAAGTAATTTCCTACTTGGCAATGGTTGCCTCTTCTGGAAAGAAA
ACCTCAACTAAGAAGGTTTCCCTTGAGGACCAAATCGTTGCCACTAACCC
CATCCTAGAGTCTTACGGTAATGCCAAGACTTCAAGAAACGACAATTCCT
CCCGTTTCGGTAAATTCATCAGAATCCACTTCACTAGCTCTGGTAAATTG
GCTGGTTGTGACATCGAGTCCTACCTTTTGGAAAAGTCTCGTATTACCCA
ACAACAAGAAGTTGAGAGATCATACCACATCTTTTACCAACTTTTGCAAC
CTTTTGTTCCTGATATGAAGAGCAAGTGTTGCTTGGGTGACGACATTTAT
GATTACAGCTACGTCTCCCAAGGTAAAGTTACAGTCGCTTCCATCGATGA
CAACGAAGAATTAGAATATACCTTCTCTGCATTTGACATCATTGGTTTTG
GTGAACAAGAGACCTGGGAATGTTTCCAACTCACTTCTGCTGTCATGAAC
ATGGGTGAAGTTCACTTCAAACAAAAGGGTCGTGATGACCAAGCTGAGCC
TGATGATATGACCTACCCCAACAAGATCGGTGAACTTATGGGTGTGAATG
CTGATGAGTTGATGAAGTCCTTCTGTAAGCCCAAGATTAAGGTCGGTACT
GAATGGGTAACCAAGGGTCAAACTTGTAATCAGGCCACCAACGGTGTCGG
TGGMATTGCCAGAGCTATCTTTGATCGTCTCTTCAAGTGGCTAATCCTCA
AGTGTAACGACACGCTAATTGATCGCTCCATGAAAAAATCCAACTTTGTC
GCTGTATTGGACATTGCTGGTTTCGAAATCTTTGAGTACAACGGCTTTGA
ACAAATCTCTATCAACTTTGTCAATGAAAAACTTCAACAATTTTTCAACC
ATCACATGTTTGTTGTTGAACAAGAAGAATATGTAACTGAAGGTATTGAC
TGGGCTATGGTTGACTTTGGTATGGACTTGGCTGCTGCCATCATTATGTT
TGAGAAGCCCATGGGTATCTGGGCTATTCTTGAAGAAGAATCTCTCTTCC
CCAAGGCCACTGACAAGTCCTTTGAAGAAAAATTGAAGGCTCAGCATTTG
GGCAAGTCTKCTCCATTTGCCAAGCCCCAATCTAAAACTGACAAGAATGC
TCACTTTGCCATCATTCATTACGCTGGTATTGTATCCTACAACGTCACTG
GATGGCTCGAGAAGAACAAGGATCCCGTCAACGACACTGTTGTTGATGTA
TTGAAGAGAGCATCCAATGAATTGCTCGTCTTTTTGTGGAGAGAACATCC
TGGACAATCCAATCCTCCAGATGATAAGGGCAAGAAGAAGAAGAAGGGTG
GCGGTGGCAAAACTGTCTCATCTGTCTACCTTGTTCAATTGAGTGAGCTC
ATGCACACTCTTCATAGCACTGAACCTCACTTCATCCGTTGTATTGTCCC
CAACACCCACAAGAAGCCCATTGAGGTTGAACCTCCACTTATTATGCACC
AACTTACATGTAACGGTGTATTGGAAGGMATTCGTATTTGTATGAGAGGT
TTCCCCAACAGAATGCTCTACCCTGAATATAAATCGAGATACCAAATCCT
TGGAGCGTCTGAAATTGCCACAGCTAGCGACAACAAAACTGGTGTTACCG
CTCTTATGAACAAAATCAGCTTTGACTGTGAAAAGTACAGATTGGGTCAC
ACGAAAGTCTTCTTCAGAGCTGGTGCTCTTGCTGCCCTTGAGGAAGCTAG
AGACGAAATCGTACTTAAGCTTGTGAGATGGATGCAAGGAGAAATCTTTG
GTAACGTCAAGCGTAAGGAATACAAAAAGAAATTCGATCAAAGAGAACTT
CTTAAGGTCATCCAAAGAAACTTCAGAAAATACCAGGTCCTCAGAAACTG
GGGATGGTTTATTATGATTCAGAAAACTCGTCCTCTCATTGGACAAGTTA
ACATTGAAGAAGAATTACGGTTACTTGAAACTAAGGCTAATGATGCTTTC
GGTGCTTATCAAGAAGCCCTTAATGTCACKAAAGATTTGGAGSCTGCCAA
TATTCAAATTGACGAAGAGAAAAAACAACTCACCAAACAACTTGAATCTG
AGCAAGGAAACTTGTCTCAATACCAGGATAGACAAACCAAAGCCCTTAAA
CTCAAGGTTTCTGCTGATTCTGACTTGGTTGTTGCCCAACAAAACTTGGC
TAAGGCTGAACAAGACCGCATTGAAATGACTGCTGATAGAAAGAAGCTCG
AAGGCCAAGTTGGTCTTGTCAAGAAGGACATTGAAGACTTGGAACTTGCC
ATCCAAAAGGTAGAACAAGAAAAAACCAACCGTGACCACATCCTTCATAC
CTTGAATGAAGAAGTTGCCGAACAAGATGAAGTGATCAACAAGCTCAATA
AGGAAAAGAAGCACATTGCTGACAACCAATCTAAGGCATCCGAAGATTTG
GTCCAAGCTGATGAGAAGGTGTCTCACTTGAACTCCATCAAGGCCAAATT
GGAGAGCACTCTTGATGAATTGGAGTCTTCTGTCGACCGTGAAAAGAGAA
CTCGTGCTGAAATCGAAAAATCAAGAAGGAAAGTTGAGGGTGAACTTAAG
ATTTGCCAGGAATCTGTTTCTGATCTTGAACATTCCAAAAAGGAACTTGA
GAACTGCATTCTCCGCAAGGAGAAGGATGCCAGCTCCTTGAACCATAAAC
TCGAGGATGAACAATCAATTGTCTCCAAGTTGCAAAAGTCAATCAAGGAA
AACCAAGGACGTGTCGAAGAGCTCGAAGAGGAACTTGAAGCTGAAAGACA
GGCCAGAGCCAAGGCTGAAAGACAAAGATCTGACTTGGCCAGAGAATTGG
AAGAACTCGGTGAGCGTCTTGATGAGGCTGGAGGMGCTACCTCTGCTCAA
ATGGAGTTGAACAAGAAGAGAGAAAACGAAGTCAACAAATTGAGACGTGA
CATTGAAGAGGCCAACATTCAACAGGAATCTATCCTTAGCAACTTGAAGA
AAAAACACCAAGATGCCATTCAAGAAATGACGGAACAAATCGATCAATTG
AACAAGATGAAATCTAAGATCGAAAAAGACAAGACCAAGATCCAACACGA
AATCGCAGATGCCCGTGCTGCTACTGATGAGATCTGCCGTGCCAAGGCTT
CATCCGAAAAATCTAACAAGAACTTGATCTGCCAACTCAATGATGTCAAC
AAGAAGGTTGAAGAAGCTAACATGACACTGGGTGACTTTGAATCTCACAA
GAGGAAGCTTGCCGCTGAGAACGGTGACTTGTTGAGAATCGCAGGAGACA
TCAACAACAACGTTAACATGTTACAAAAGATGAAGTTCTCTCTCCAATCT
GCTTTGGAAGATGCCAAACACAACGCTGACGATGAAGCCCGAGAGAGATG
CTTGCTTCTTGGAAAGTTCAAGAACCTTGAACATGAAGTGGATGGATTAA
GGGAAAACCTTGAAGAAGAGATTTCTGCTCGTGATGACTTGAACAGACAA
ATCAATAAGTGTGAGGGTGAGGCCAACCTATGGCGCACCAAATACGAATC
CGAAGCTGTTGCTAAGGCCGAAGAATTGGAAATGTCAAAGATGAAGTTGC
AAGCCCGCTTGACAGAAGCTGAGAGTACCATTGAGAACCTCAACTGCAAA
TTGAGTCAAGTCGAAAAGAGCAAGGGCAAACTCCACCTTGAGATTGAAGA
AATGAGCATCAGCTTGGACCAAGCTCAAATCCTCAACAACCAAATGGAAA
AGAAGGCAAGACAATTCGACAAGATTGTCCAAGAATGGAAGGGCAAGGTT
GATGGATTGAGCATGGATCTTGACGTTTCTCAAAAGGAATGCAGAAATGC
TTCCTCCGAACTCTTCAGAGTGAAATCCGCCTACGAAGAATCCGTCTCTC
AATTGGATGAAGTCAGACGTGAGAACAAGACTTTGAGCAACGAAATTAAG
GACATCATGGACCAAATCAGTGAAGGTGGCAGATCCATCCACGAGATTGA
CAAAATCAGAAAACGCCTTGAAGCCGAAAAGATTGAGCTCCAAGCTGCTT
TGGAAGAAGCTGAAGGTGCCCTTGAACAAGAAGAAAACAAGGTTTTGAGA
GCTCAACTTGAATTGACTCAAGTTAGACAAGAAATTGAGCGCCGCATCGC
TGAGAAGGAAGAAGAATTCCAAGGAATCAAGAAAAACCAAGGCAAGGCCG
TTGAAGGTATGCAAGCTGCTTTGGAACAAGAAAGCAAGGGTAAGGCTGAA
GCTTTGAGAATGAAGAAGAAGCTTGAGTCTGATGTTGGGGAATTGGAAAT
GTCTCTTGAGCACTCCAATGCCAACAACCTCGAAACCCAAAAGTCCATTA
AGAAGTACCAACAACAAATCCGTGAAAACCAATCCAAGTTAGAAGATGAA
CAAAGAGCTAAGGAGAATGCCCGTGACGCTTTGGTCGTTTCTGAGCGCAA
GTCTCATGCCATGCAGAACGCTTTGGAAGAGGCCCGTACTCTCTTGGAAC
AAGCTGACCGCAATAGAAGAATCAATGAACAAGAGCTCTCTGATGTTAAC
GAATCATTAAGTGATGCTACTGTCCAAAATCAAGCTATTGCTGCTGCCAA
GCGCAAGCTTGAATCTGAAATGCAAACTTTGCAAGTAAGTAGTTCAAACC
TTACTCTCAATTCTGTTTTTAAATTATTAACTTTCTTTCTTTAGGCTGAT
CTTGATGAGATGGCAGTCGAAGCTAGACTTTGTGACGAGAAGGCCAGCAA
GTCCATGATTGATGCTGCTCGCCTTGCAGATGAACTTAGATCCGAACAAG
ACCATGCTCAATCCCTTGAAAAATCCCGTAAACTTTTGGAAGCCCAAGCC
AAGGACATGCAAACCCGTCTTGATGAAGCCGAATCCAATGCCCTTAAGGG
AGGAAAGAAGGCCATGAATAAGATGGAGACTCGTATCCGTGAATTAGAAT
CCGAAATGGATGCTGAGAATCGCCGTTTGGCTGACTCTCAAAAGAACTTG
AGAAAATCTGAGAGAAGAATCAAGGAGCTCACCTTTGCCGGTGATGAGGA
TCGCAAGAACCACGAACGTATGCAATCTTTGATTGATCAACTCCAAGGAA
GAATCAAGTCCTACAAGAAGCAGATCGAAGAAGCTGAGGAAATCGCTGCT
TTGAATTTGGCAAAGTTCCGCAAAACTCAAGCTGTCTTGGGTGATGCCGA
GAGCCGTGCTGATATCTCTGAACAAGCCCTTGCCAAGGCTAAGGTTAGAG
GACGTAGTGTCTCCATTGGACCCCAATAAAATGGGCTCACTCCATCTAAT
CATTTTGAGAAAAACTTGATCAAAATGAAATAAACCTTTAAAAAATTAAG
AACAAAAAAATAAATACATAAAACCATTCTCTATATGATTGAAATAAAAT
GCAATAAAGAAGAAATAAAAAAAAAATTCCTTTGTTGTCATCCATCTTCA
ATCCTTATTCCTTTGCTCCACTTCATTTTTGAATGAAAATCCGTTCATTG
AAAAATAGTGTATGTAGATACTAGAGATGGAACGATTCCAAAATATTTAT
CAATACCGATTCCGGTGCAGAATCTGATACAAAAATCCTTGTTTCCCACA
TAACATATAACACAATTAAGTGTCTTCGATTATTTACCTCTCATCAAATA
TTTACTTACCCACAAAAAAATTTCTTTTCAATAATTATAAAAGAAAAAAG
TTGTTATTGCATGTGTTCAGGGGTTGGATCAGGG back to top
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