EMLSAT00000003140, EMLSAT00000003140-698987 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003140
Unique NameEMLSAT00000003140-698987
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:502723..505157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003140 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003140EMLSAG00000003140-685906Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013779EMLSAE00000013779-722707Lepeophtheirus salmonisexon
EMLSAE00000013780EMLSAE00000013780-722708Lepeophtheirus salmonisexon
EMLSAE00000013781EMLSAE00000013781-722709Lepeophtheirus salmonisexon
EMLSAE00000013782EMLSAE00000013782-722710Lepeophtheirus salmonisexon
EMLSAE00000013783EMLSAE00000013783-722711Lepeophtheirus salmonisexon
EMLSAE00000013784EMLSAE00000013784-722712Lepeophtheirus salmonisexon
EMLSAE00000013785EMLSAE00000013785-722713Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778227auto778227Lepeophtheirus salmonispolypeptide
EMLSAP00000003140EMLSAP00000003140Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003140

>EMLSAP00000003140 ID=EMLSAP00000003140|Name=EMLSAP00000003140|organism=Lepeophtheirus salmonis|type=polypeptide|length=465bp
MIAKRLLFLGLVYILIDSGKTEEPSTTLFNWINYIQSLPTPIYSPDPFDS
KPCFDDVDEIQHWNEDGILSGVLSNGSVLQISTNDIDIKKASGNATLTNG
DFEIDGYFTNGCFKGLVRYYRIYDTDYIGEGRKIVKALIGITYMKERGIP
YSGSTWRFLRGTLEPDLFAYMIMSGENIDGARTPISSEDYKNMFSGGNVI
MLYPDFQTAMQGKFYQGDLVEGKLVTIPEVIQNYEGLMEIVTSKPFGELY
KRDVASHKKFSIQPFLKDPYEAKNCEIRRSIIENAGDGVFSKRFLKNGTA
IGYFKGVKLREKDIEPITIWNVFTGSLDRSKYLIQYGENDEYLDVPEEYG
KVSQYNATTAHKVNHSRKPNAGYFDCNHPRFGEVLCLYTQKDLDEGDEVF
VKYAITISRDTVDRMLKAGFLASRMYTGKSKDEMQKSFKPYVKMLTNFNH
EHPIQEIIEDMLGFH
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mRNA from alignment at LSalAtl2s175:502723..505157-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003140-698987 ID=EMLSAT00000003140-698987|Name=EMLSAT00000003140|organism=Lepeophtheirus salmonis|type=mRNA|length=2435bp|location=Sequence derived from alignment at LSalAtl2s175:502723..505157- (Lepeophtheirus salmonis)
ATGATAGCTAAACGTTTACTATTCTTGGGCTTAGTGTATATTTTGATAGA
TTCTGGGAAGACTGAAGAGCCAAGTACTACACTGTTCAATTGGATAAACT
ATATCCAGTCTTTACCAACGCCTATTTATTCTCCAGATCCCTTGTGAGTT
ATGAAATGCAAACAATATTTATCAAAATAGAAAAATTATTATCTTTACAT
TGTGGTAGTGATCGATAAAATATATGAATTGATCTTAAAAATAGTTAAAT
ATATACTTTTACATTTTGACAAAGGACTTCTTTGTTATTCAATGACTGTG
TGTGTTTCACAATCAAAAGACTTCCTCGTGCTAGAGACATAAAATTTGAC
TGTTGACAACACACTATCTGATAAATTCACTGATGTCATCTATTTTTGTT
ACTTTCTAGTGATAGCAAACCATGTTTTGATGACGTTGATGAAATTCAGC
ATTGGAATGAAGACGGTATTCTCTCAGGAGTACTGTCAAATGGAAGTGTA
CTTCAAGTAAGTTTTGAAAATGATAATAATTCAAATTTATGACTACAACT
ATATCAATCACATTTCTTCATTAGATTTCTACAAATGATATTGATATCAA
AAAGGCTTCGGGGAACGCTACACTCACAAATGGAGATTTTGAAATTGATG
GATACTTTACAAATGGTTGTTTCAAGGGACTAGTTCGCTACTACCGAATC
TATGATACAGATTATATTGGTGAAGGAAGAAAAATTGTGAAAGCTTTGAT
AGGTATAACCTATATGAAGGAAAGAGGTATACCTTATTCTGGATCAACAT
GGCGTTTTTTGAGAGGAACTTTGGAGCCTGATTTATTTGCTTATATGATA
ATGAGTGGTGAAAATATAGATGGAGCAAGAACACCCATATCATCAGAGGA
TTATAAAAATATGTTTAGTGGGGGAAATGTGATAATGCTGTATCCAGACT
TCCAAACAGCTATGCAAGGAAAGTTTTATCAAGGAGATTTGGTGGAAGGA
AAATTGGTATGAGTTGAATTAAAGTATTACTTTTACATGATAAATTTACA
AATACATGTCTTCATTTCTAGGTCACTATACCTGAAGTCATACAAAATTA
TGAGGGATTGATGGAAATAGTTACATCAAAGCCATTTGGGGAGTTGTATA
AAAGGGATGTTGCCTCACATAAAAAGTTTTCAATTCAACCCTTCCTAAAA
GGTACGCCATATTCTGACAGTCTCCCAAATATTGTATTTCAGGAATCAAT
TTGAACCATTCCAGGATCTATTTTTACGTTAATACACTTATCGTGTCCAT
AGTAGTACATAACGTTACCCTACTTATGTATATATAAATCAGCTGTTGAT
TGTTCTACATTATCTACCCTAATCAATATTCAGAACGTTGACTGCTTAAA
ATAGAAATTAACTCTAATCAAGCTGTTATATAAGAATAGCTTCTAAATTT
TTGAATAGAAAAATGCCAAAAATTGGTTGGTGGCAAAGCAATCCTTCCCA
ACTACACGACCTAATTTTTGCCCATTTTTCTATTTCTCTTTGGATACAAG
GCTGCAAGATATAATAAAAATAACACAGTAGACACGAACCGTGAGGGGTG
TATAGGACAAGCGACAATCTAAATTTTTGAAATTTCTACTAATAAAGTTT
ACGCTATCCATCCACCCCCAACTACCCCTCACTTGCTTCCAACATAGTTA
CATATCGAGTCCTTTGTTTATAGATCCATATGAGGCAAAGAATTGTGAAA
TTCGCCGCTCAATTATTGAAAATGCAGGGGATGGTGTCTTTTCCAAGAGG
TTTCTGAAGAACGGTACTGCTATTGGATATTTCAAGGGAGTAAAATTAAG
AGAAAAAGATATAGAGCCCATTACTATTTGGAATGTCTTTACTGGTTCAC
TAGATAGATCCAAATACTTAATTCAATATGGAGAGAATGATGAATATTTG
GATGTTCCTGAAGAATATGGAAAAGTTAGTCAGTATAACGTAAGTTAACT
AGACGATTACAAAATAAATATAACATGTATTTAGTTAAATTCTTACCCAG
GCAACGACTGCACATAAAGTGAATCATTCCCGAAAACCAAACGCCGGATA
TTTTGATTGTAATCATCCTCGTTTCGGTGAAGTTTTATGTCTTTATACAC
AGAAGGTATGTAAAAAACTCTTCAAATAAAAAATATTAATTTTCATCCGT
TAATTTGTAGGACCTTGATGAAGGGGATGAGGTATTTGTAAAATATGCAA
TAACAATAAGTCGAGACACAGTTGATAGAATGCTTAAGGCTGGATTTCTT
GCCAGCCGAATGTATACAGGAAAGTCAAAAGATGAAATGCAAAAATCTTT
TAAACCATATGTAAAAATGCTTACAAATTTCAATCATGAGCATCCAATCC
AGGAAATAATTGAGGATATGCTCGGATTTCATTGA
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