EMLSAT00000003154, EMLSAT00000003154-699001 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003154
Unique NameEMLSAT00000003154-699001
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:77921..80187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003154 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003154EMLSAG00000003154-685920Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013833EMLSAE00000013833-722761Lepeophtheirus salmonisexon
EMLSAE00000013834EMLSAE00000013834-722762Lepeophtheirus salmonisexon
EMLSAE00000013835EMLSAE00000013835-722763Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771540auto771540Lepeophtheirus salmonispolypeptide
EMLSAP00000003154EMLSAP00000003154Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003154

>EMLSAP00000003154 ID=EMLSAP00000003154|Name=EMLSAP00000003154|organism=Lepeophtheirus salmonis|type=polypeptide|length=449bp
MMEVLKNIGVLFYIVNPYESLFEKPEDLPKPDWISRAIPYLYGSILLESI
VYTALGRKNGPRFNDGINSITHGSYLLIRNAIIKGITNIPYIYIYEHYRI
YGLPWDSVWTWLITMVAIDFCYYWVHRASHEVGFLWSAHQVHHSSEDYVL
TTALRQSVFQEFGATVFYLPMAFFIPPSHKLVHDQFNLLYQFWIHTELIK
DLGPLNYIFNIPRHHMVHHGANRYCIDKNYAGFLIIWDRMFGTFEDLRTD
EEIVYGLVDHPQFFNPIKHQLYYYKLLWNKAATMDNWKDKIYCFVKGPGW
FPGTSWTGDLSCLPEIPKREKYNPSTSFSTKFYIFTHFNVALYVLEVFSR
VESSLSQSVFFGIISLLMVSLTNFGFICDKHPKAWIYEALRCLLFLIGYN
VFGGRNDEGVLSFYPIPRILVNALFIISLISSVFKHFTVQIQPKRTKGE
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mRNA from alignment at LSalAtl2s175:77921..80187+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003154-699001 ID=EMLSAT00000003154-699001|Name=EMLSAT00000003154|organism=Lepeophtheirus salmonis|type=mRNA|length=2267bp|location=Sequence derived from alignment at LSalAtl2s175:77921..80187+ (Lepeophtheirus salmonis)
AATAACTTGAGCAGTGTTTAGCTTAAATGCTCCTTCCTCCATGATTATTG
TATAAGTTCTTTATTTGTGAATAAATCAATAAGATTCTATAAAGATAAGT
ATGATGGAAGGCAAGTAAAGAAAGAGAAAACCTAATCATCTTATAAATAT
CATTATTTTTCTCTATTGTATGAGTAGTTCTACTCTTCTTGAATTGAAGG
AATGATGGAAGTGCTAAAAAATATTGGAGTTTTATTTTATATCGTAAATC
CTTATGAGTCCCTCTTTGAAAAACCTGAGGATTTACCTAAACCAGATTGG
ATATCAAGAGCCATTCCTTATTTATATGGCAGCATCCTACTTGAAAGTAT
TGTATATACTGCCTTAGGACGTAAAAATGGGTAAATATACTGAGATGTTC
GCAAGGGGAAGGGTCAGGAGCTTTAAATCTTGTTCCCTGCAAAATTGTCC
TATACTTATATCTATTTACCATATAAATAAACTAAACTAGCTCCAAACAA
AAATCATGCGAACGCCCATGAGCCATAGGTGGGGGTTTAAATTACTAAGA
GGAGGACCATTTATAAAAATTACTTATTATGTAAATCTATGTATATATAT
TAAATCTTGAGAATCAAGGGGGGCTAACCCCTTGCAAACTCTGCCTTTGA
CATGGACCATGAATATTATACATATTATATCCCTTATGTAATTGAACTAT
TTTTGTTCATATTTCATTATAATTAGTCCTAGGTTCAATGATGGAATCAA
TTCCATTACTCATGGATCATACTTACTCATTCGAAATGCCATCATTAAAG
GAATTACAAATATACCATACATTTATATCTACGAACATTATCGAATTTAT
GGGCTACCTTGGGACTCTGTTTGGACTTGGCTCATAACTATGGTAGCTAT
TGATTTTTGTTATTACTGGGTTCATCGTGCATCCCACGAAGTTGGGTTTC
TGTGGTCTGCACATCAAGTTCACCATAGCTCTGAAGACTATGTTTTGACA
ACTGCCTTGAGACAATCTGTGTTTCAGGTAAAATAAATCAACTACCTTAG
TATTAAAAATACATTTAAAAGTTAGAAATAGTCTTAAATAAATTGGCCAC
ATTACCAACTTATTTTTTAATTAAATAGCAAAATTTAAACATAAACTGTG
TCAACTCATATTCATCATTATGTAACCTATCGCAAATCCAATGATTTATT
TATCTATATTAGGAATTTGGAGCCACGGTGTTCTATTTGCCTATGGCTTT
TTTCATMCCTCCAAGCCATAAACTTGTTCATGATCAATTTAATTTACTCT
ATCAATTCTGGATTCATACTGAGCTGATAAAAGATCTTGGGCCTCTCAAC
TATATTTTTAACATTCCAAGACATCATATGGTTCATCACGGAGCGAATCG
ATACTGTATTGATAAAAATTATGCTGGGTTTCTCATAATCTGGGATAGAA
TGTTTGGAACTTTTGAAGACCTAAGAACGGACGAAGAAATTGTTTATGGG
CTTGTGGACCATCCTCAATTTTTCAACCCCATAAAACATCAATTGTATTA
TTATAAACTACTTTGGAACAAAGCTGCTACAATGGATAACTGGAAAGACA
AAATTTATTGTTTTGTCAAAGGCCCAGGATGGTTTCCAGGAACATCTTGG
ACTGGTGATTTGTCCTGTTTACCTGAAATACCCAAAAGGGAAAAGTACAA
TCCTTCAACATCATTCAGTACCAAGTTCTACATATTTACACATTTCAATG
TGGCTCTTTATGTGCTTGAAGTATTTTCTAGAGTTGAAAGTAGTCTCTCC
CAGTCTGTTTTTTTCGGAATTATTTCTCTTCTCATGGTTTCACTAACTAA
CTTTGGCTTTATTTGTGACAAACATCCTAAGGCATGGATATATGAGGCAC
TAAGGTGTTTATTGTTCTTGATAGGATATAACGTCTTTGGAGGAAGAAAT
GATGAGGGTGTATTGAGTTTTTATCCTATTCCTAGAATCCTAGTAAATGC
TCTATTTATCATCTCTCTCATCTCCTCAGTTTTTAAACATTTTACCGTAC
AAATCCAACCAAAGCGTACTAAAGGGGAATAAGTAGAAGATACTTAATTG
AAATATAATATTAATTTTTTTTTTTTTTTTTTTCACTATATAAGTATTYT
AATTAAGTTTTAATATACAAATTAAACATTTTGCAATTTTGTTTCCTTTG
GGAGAAAGTAAGTCTAAATTTTATTTTGTATGTTTAAATAATGATAATAA
AATTCACTTTTTACTGC
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