EMLSAT00000003163, EMLSAT00000003163-699010 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003163
Unique NameEMLSAT00000003163-699010
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1767supercontigLSalAtl2s1767:48381..49134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003163 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003163EMLSAG00000003163-685929Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013865EMLSAE00000013865-722793Lepeophtheirus salmonisexon
EMLSAE00000013866EMLSAE00000013866-722794Lepeophtheirus salmonisexon
EMLSAE00000013867EMLSAE00000013867-722795Lepeophtheirus salmonisexon
EMLSAE00000013868EMLSAE00000013868-722796Lepeophtheirus salmonisexon
EMLSAE00000013869EMLSAE00000013869-722797Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770593auto770593Lepeophtheirus salmonispolypeptide
EMLSAP00000003163EMLSAP00000003163Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003163

>EMLSAP00000003163 ID=EMLSAP00000003163|Name=EMLSAP00000003163|organism=Lepeophtheirus salmonis|type=polypeptide|length=169bp
MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCP
VTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDP
LICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCEN
NEVVIHMCKKTCNICDEET
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mRNA from alignment at LSalAtl2s1767:48381..49134-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003163-699010 ID=EMLSAT00000003163-699010|Name=EMLSAT00000003163|organism=Lepeophtheirus salmonis|type=mRNA|length=754bp|location=Sequence derived from alignment at LSalAtl2s1767:48381..49134- (Lepeophtheirus salmonis)
ATGAACTCTTTTCATTTAGTTTTAATCGCATTTTTCTTGCAAGGAATTAA
TGGAAAAATAACAGGTAAAATTTGAATCATTTAAAAGAATAAGCAATCTA
TATTAATTATCCTTTACTTAGACACGGAGTGCGTGGATGACAGTGAAACA
CTTTGTCAAAGACAGGAAGGTAGTTGCTATATTCCATCCATTCAACATAG
ATGTCCAGTAACGTGTGGAGTATGTAAGGGTAAGCATTGTTTATTATAAG
TAGAAATTAAATGAAAAGTTATATCCTATACTTTTCCGTGTATTTTTCAT
TTATTTTATTAGCAAAATGCAAGGATTATAAAGATGATTGCCCTCTTGAA
AACGAACAATGCGATTATGATGAAACTTTTCAGACTGAATGCCCAAAAAC
TTGCGCTACGTGTGATGGTAAATTATTATTTATATAATAAGGACGATTTA
AATTATTAAAATCTATTTTTTAGTATGTGAGGATTTGATAGACCCATTAA
TTTGTAATGAAGGTTTAAGTGATTGTCACCATAAATATATGAGATATGCT
TGCAGAAAAACATGTCTGTATTGCAGTAAGTTAACAACGTAATTTTGTTG
GTAAATATCACTTTTTAAAATTTTAGTGGATCCATATAATGACGTTGGTA
ATGGTGCCTTTTGTAAAATGCACAAAATTAGTGGAAGCTGTGAAAACAAT
GAAGTTGTTATACATATGTGTAAAAAAACTTGTAATATTTGCGATGAAGA
AACA
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