EMLSAG00000003163, EMLSAG00000003163-685929 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003163
Unique NameEMLSAG00000003163-685929
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000003163 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:48381:49134:-1 gene:EMLSAG00000003163 transcript:EMLSAT00000003163 description:"maker-LSalAtl2s1767-snap-gene-0.4")

HSP 1 Score: 345.125 bits (884), Expect = 2.560e-122
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET 169
            MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET
Sbjct:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET 169          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7")

HSP 1 Score: 240.736 bits (613), Expect = 2.973e-81
Identity = 117/168 (69.64%), Postives = 132/168 (78.57%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
            MNSF+LV+IA F QGINGKIT+TECVDDSE +CQRQEGSCYIPS Q  CP TCG+CKAKCKDY  DC LE  QC ++ET  +ECPKTCATCDVCEDLID  +C EGLSDC + YMRYACRKTCLYC DP ND GN +FCK H   G+C +N     MCK++C ICD E
Sbjct:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPE 168          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5")

HSP 1 Score: 234.958 bits (598), Expect = 6.872e-79
Identity = 116/168 (69.05%), Postives = 131/168 (77.98%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
            MNSF+LVL+A F QGINGKI+ TECVDDSE  C+ QE  C+IPS+Q  CP TCGVC A+CKDYK DC +E  QC Y+ TF  ECPKTCA CDVCEDLID  IC E L DC + YMRYACRKTCLYC+D  NDVG+  FC + K+SGSCENNEVV  MCKKTCNIC+ E
Sbjct:    1 MNSFYLVLMACFFQGINGKISATECVDDSEQSCKSQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDCTNAYMRYACRKTCLYCIDSCNDVGSEDFCNIQKLSGSCENNEVVKKMCKKTCNICEFE 168          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010892 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362:18120:-1 gene:EMLSAG00000010892 transcript:EMLSAT00000010892 description:"maker-LSalAtl2s726-augustus-gene-0.6")

HSP 1 Score: 214.157 bits (544), Expect = 9.447e-71
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
            M SF+LVLIA F+QGINGK  DTEC DDS+ +C+ QE  C+IPS+Q  CP TC VC+A+CKDY D+C  EN QC  + T   ECPKTCATCDVCEDLID  IC   L DCH+ YMRYACRKTCLYC+DP N+VGN  FCK+H  +  CE N+V   MC+K+CN C+ E
Sbjct:    1 MKSFYLVLIACFIQGINGKKYDTECEDDSQHVCENQESRCFIPSVQFNCPKTCSVCEAQCKDYNDNCYQENFQCGNNVTISNECPKTCATCDVCEDLIDTSICQTSLKDCHNNYMRYACRKTCLYCLDPCNNVGNDDFCKLHTTNRICEKNDVFKKMCRKSCNFCELE 168          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1")

HSP 1 Score: 167.162 bits (422), Expect = 1.871e-52
Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
            M S +LVLIA F +GING + + EC+DDS+  C+ +E  C+ P  Q+ CP TCGVC   CKDY   C  E+ Q   +     ECPKTCA CD+CEDLID  IC   LS+C  K M+YACRK+C YC D  NDVG+  FC +H   G CE NE V  MC+K+C +C+ E
Sbjct:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIE 168          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000003732 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:16746:17193:1 gene:EMLSAG00000003732 transcript:EMLSAT00000003732 description:"maker-LSalAtl2s2000-augustus-gene-0.2")

HSP 1 Score: 125.176 bits (313), Expect = 7.409e-37
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 0
Query:   59 KCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICD 166
            KCKDY ++C  E  QC  +ET   EC KTCA  DVCEDLID  IC + L DC++ YM+YACRKTCLYC+DP NDVGN  FCK+HK +G+ ++NE    +C+K+CN C+
Sbjct:    1 KCKDYINNCYGEFSQCGSNETISKECLKTCAKXDVCEDLIDTSICEKSLKDCNNNYMKYACRKTCLYCLDPCNDVGNADFCKIHKDNGAFKSNEAFKIICRKSCNFCE 108          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000007568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191:5850:1 gene:EMLSAG00000007568 transcript:EMLSAT00000007568 description:"maker-LSalAtl2s4372-snap-gene-0.1")

HSP 1 Score: 119.013 bits (297), Expect = 4.222e-34
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   24 ECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENN 151
            +C+D  E+ C+  +  C+  SIQ  CP TCGVC A CKDY  +C  E   C  +     ECPKTCA CDVCEDLID  IC   LS+C    M+YACRK+C +C D  NDVG+   C  H   G CE N
Sbjct:    2 DCLDSPESNCRSXKDQCFDSSIQFVCPQTCGVCNAICKDYNSNCLTEESXCILNNNXLDECPKTCAKCDVCEDLIDSSICETKLSECAQNQMKYACRKSCKHCEDKCNDVGSHDLCSEHVRRGDCEKN 129          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 79.7221 bits (195), Expect = 4.792e-19
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 0
Query:   18 GKITDTECVDDSET---LCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKY-MRYACRKTCLYCMDPYNDVG-NGAFCKMHKISGSCENNEVVIHMCKKT 161
            G IT+ EC +       L +  + +C IPS Q  CP  CGVC+A+CKD+   C   +  C      Q  CPK+CA+CD CED+I P +C +    C     + YACR+TC  C D  ND     + C + +  G C N+ + I+  KK 
Sbjct:   20 GLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYC-NDPININFMKKA 166          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2")

HSP 1 Score: 75.8702 bits (185), Expect = 1.173e-17
Identity = 60/171 (35.09%), Postives = 84/171 (49.12%), Query Frame = 0
Query:    6 LVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQC-DYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMD------PYNDVGNGAFCKMHKISGSCEN----NEVVIHMCKKTCNIC 165
            L++I+FFL    G+  D  C D+ E+ C+     C  P    +C  +CG C++ C D    C     +C D D+ F  EC + C  CD CEDL++ L+CNE  + CH++ +RY C  TC  C        PYN       C   K SG C+     N  +   C+KTCN C
Sbjct:    6 LIIISFFLVVAYGQ-GDRMCRDEMES-CETNAYKCMNPEYYFKCKKSCG-CESACTDKSIKCIQNPNKCLDRDQRF--ECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATCRLCEKGCRDNLPYN-----MMCNNFKKSGYCDRKSIYNRFMQSACQKTCNFC 166          
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 75.0998 bits (183), Expect = 1.592e-17
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   41 YIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHH-KYMRYACRKTCLYCMDPYNDVG-NGAFCKMHKISGSCENNEVVIHM---CKKTCNICDEET 169
            Y    Q  CP  CGVC+A C+D    C   +E C   ++ + +CPK+CA+CD CEDLI+  +C+     C     ++YACRKTC  C D  ND   + + C   + +G CE +  +  M   C++TC  C  ET
Sbjct:    4 YCLXXQWMCPEQCGVCQASCRDTGASCLEHSESC-LQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRACRRTCGFCFLET 136          
BLAST of EMLSAG00000003163 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 174.481 bits (441), Expect = 6.679e-53
Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = 0
Query:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNIC 165
            M S +LVLIA F QGING I++T CVD+S+++C   +G C  PSI + CP TCGVCKA CKDY  +C  E+ QC  ++     CPKTCATCD CEDLID  IC    SDC    M+Y CRK+C YC D  NDV +   CK H   G C NNE V  MCKK+C +C
Sbjct:    1 MKSLYLVLIACFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSCKYCEDTCNDVASDELCKSHVSRGDCGNNEAVKRMCKKSCELC 165          
BLAST of EMLSAG00000003163 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 73.9442 bits (180), Expect = 1.419e-13
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 0
Query:    6 LVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMD------PYNDVGNGAFCKMHKISGSCEN----NEVVIHMCKKTCNIC 165
            L++I+FFL  +NG+   T C ++ E+ C+     C  P    +C  +CG C++ C D    C     +C  D   + EC + C  CD CEDL++ ++CN+  + C++  +RY C  TC  C        PYN V     C   K SG C+     N  +   C+KTCN+C
Sbjct:    6 LIIISFFLVVVNGQGNST-CENEMES-CETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNPNKC-LDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRV-----CHNFKKSGFCDRKSIYNRFMKSACQKTCNLC 166          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003163 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003163 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAP000000031632.560e-122100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:4838... [more]
EMLSAP000000108982.973e-8169.64pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203... [more]
EMLSAP000000108996.872e-7969.05pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215... [more]
EMLSAP000000108929.447e-7162.50pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362... [more]
EMLSAP000000062391.871e-5251.19pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295... [more]
EMLSAP000000037327.409e-3757.41pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:1674... [more]
EMLSAP000000075684.222e-3449.22pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191... [more]
EMLSAP000000059754.792e-1936.91pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068... [more]
EMLSAP000000046401.173e-1735.09pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:1527... [more]
EMLSAP000000059741.592e-1737.31pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:... [more]

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BLAST of EMLSAG00000003163 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003163 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003163 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|225712722|gb|ACO12207.1|6.679e-5353.94ZK643.6 precursor [Lepeophtheirus salmonis][more]
gi|290462093|gb|ADD24094.1|1.419e-1332.94protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000003163 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1767supercontigLSalAtl2s1767:48381..49134 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1767-snap-gene-0.4
Biotypeprotein_coding
EvidenceIEA
NoteZK643.6 precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003163 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003163EMLSAT00000003163-699010Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1767:48381..49134-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003163-685929 ID=EMLSAG00000003163-685929|Name=EMLSAG00000003163|organism=Lepeophtheirus salmonis|type=gene|length=754bp|location=Sequence derived from alignment at LSalAtl2s1767:48381..49134- (Lepeophtheirus salmonis)
ATGAACTCTTTTCATTTAGTTTTAATCGCATTTTTCTTGCAAGGAATTAA TGGAAAAATAACAGGTAAAATTTGAATCATTTAAAAGAATAAGCAATCTA TATTAATTATCCTTTACTTAGACACGGAGTGCGTGGATGACAGTGAAACA CTTTGTCAAAGACAGGAAGGTAGTTGCTATATTCCATCCATTCAACATAG ATGTCCAGTAACGTGTGGAGTATGTAAGGGTAAGCATTGTTTATTATAAG TAGAAATTAAATGAAAAGTTATATCCTATACTTTTCCGTGTATTTTTCAT TTATTTTATTAGCAAAATGCAAGGATTATAAAGATGATTGCCCTCTTGAA AACGAACAATGCGATTATGATGAAACTTTTCAGACTGAATGCCCAAAAAC TTGCGCTACGTGTGATGGTAAATTATTATTTATATAATAAGGACGATTTA AATTATTAAAATCTATTTTTTAGTATGTGAGGATTTGATAGACCCATTAA TTTGTAATGAAGGTTTAAGTGATTGTCACCATAAATATATGAGATATGCT TGCAGAAAAACATGTCTGTATTGCAGTAAGTTAACAACGTAATTTTGTTG GTAAATATCACTTTTTAAAATTTTAGTGGATCCATATAATGACGTTGGTA ATGGTGCCTTTTGTAAAATGCACAAAATTAGTGGAAGCTGTGAAAACAAT GAAGTTGTTATACATATGTGTAAAAAAACTTGTAATATTTGCGATGAAGA AACA
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