EMLSAT00000003177, EMLSAT00000003177-699024 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003177
Unique NameEMLSAT00000003177-699024
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s176supercontigLSalAtl2s176:362935..364503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003177 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003177EMLSAG00000003177-685943Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013915EMLSAE00000013915-722843Lepeophtheirus salmonisexon
EMLSAE00000013916EMLSAE00000013916-722844Lepeophtheirus salmonisexon
EMLSAE00000013917EMLSAE00000013917-722845Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776883auto776883Lepeophtheirus salmonispolypeptide
EMLSAP00000003177EMLSAP00000003177Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003177

>EMLSAP00000003177 ID=EMLSAP00000003177|Name=EMLSAP00000003177|organism=Lepeophtheirus salmonis|type=polypeptide|length=318bp
MNIEYLIIKWGGKEYRIEDLNENTSVLQLKKLIQERTEVRPERQKLLNMK
LNGKAPGDDILLSTLPTKNGAKIMMMGSLEKDIAATEIVPDDLPYVKNDL
DDHDDGEETSIENRSEYLTKIQHRIDNCEIHLRNELRPGKKLLVLDIDYX
LFDHRSPAENAGELMRPYLHEFLTSAFKDYDIAIWSATSLKWIKEKMRLL
GCDSHTDYKLAFFMDCRHMISVHTQKYGVVEVKPLGVIWGKFPQYKKENT
IMLDDLRRNFLMNPQNGLKIRPFRDAHVNRNSDEELLKLSEYLKVISHLP
DFTTLKHRKWESYLRRYT
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mRNA from alignment at LSalAtl2s176:362935..364503-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003177-699024 ID=EMLSAT00000003177-699024|Name=EMLSAT00000003177|organism=Lepeophtheirus salmonis|type=mRNA|length=1569bp|location=Sequence derived from alignment at LSalAtl2s176:362935..364503- (Lepeophtheirus salmonis)
ATGAATATCGAGTATTTAATTATAAAATGGGGTGGAAAGGAGTATCGAAT
CGAGGATTTGAATGAAAACACATCCGTCCTTCAACTCAAGAAACTCATTC
AAGAAAGAACTGAAGTTCGGCCTGAGCGACAAAAACTTCTTAATATGAAA
CTGAATGGTGCTCATAATGATTGATTATTTATTGTTACAGACTTACATAT
AATAAATTCAATTTTGGGAACATTTTTAATTTTATAATTCAAAGTTCCAT
TAAGTTCAGGATTTTTCATTTTTGTATTACATAATTAAGTAATGCAATTT
GAATTACATAGTAATGTTATTGTCAACTATTTGTTTGAATGTATTAATTA
AGTATGGCATGCACATTGAATGTTTAAGAGTATTTGAATGCTGAGCTCAT
AGGTAACATAGTTTTAAATCCCATTTATTATAGGGAAAGCTCCTGGAGAT
GACATCCTCTTATCAACTCTTCCTACTAAGAATGGAGCCAAGATTATGAT
GATGGGCTCATTAGAAAAGGATATAGCCGCTACTGAAATCGTTCCTGATG
ACTTACCCTACGTCAAAAATGATTTAGATGATCATGACGATGGTGAAGAA
ACATCTATTGAAAATCGCTCAGAGTATTTGACAAAAATTCAGCATAGAAT
AGACAATTGTGAAATTCATTTAAGAAATGAACTTAGACCAGGGAAAAAAC
TTTTAGTCTTGGATATAGACTATMCTCTTTTTGATCATCGTTCGCCCGCT
GAAAATGCTGGTGAGCTCATGCGGCCCTATCTTCATGAATTTCTTACGTC
TGCTTTTAAGGATTATGATATTGCAATATGGTCTGCTACGTCCCTCAAAT
GGATTAAAGAAAAGATGAGGTTACTGGGATGCGACTCTCATACCGACTAT
AAGCTTGCTTTTTTTATGGATTGCCGGCATATGATCTCAGTCCATACTCA
AAAATATGGAGTCGTTGAAGTAAGTTGATCCTTACATAACATGATTTTCT
CTGCTTTTGAGAAGCTTGTAGTTGTTCTTCATCATTTTTAGATATTGTAT
CCTTTATGATGGTTTTTTGCACAGCTCTTATTCATTAAATTGAGGGAAGA
TATTAAAATTAGTAGAGTGGAAAATATTGAATAACATAATACTGGAATTA
TTTTGACTAGCTGTGTGTCATTTTATGCCTATATTTATTTTTGTATCACT
TGTTATGTCATTACTCTGCATAACATGTCTGTATTTTTTAACACTTGTGT
GCTTCTTAAATTACTACTTCAATCCGATTATATTTTTCATTTATTTGTTT
CACAGGTGAAACCCCTAGGAGTAATATGGGGTAAGTTTCCTCAATATAAA
AAAGAAAACACGATCATGTTGGATGATCTAAGAAGAAATTTTCTTATGAA
TCCACAAAATGGTCTCAAAATTCGCCCATTTCGTGATGCACATGTAAATC
GAAATTCTGATGAGGAATTGTTGAAGCTCTCTGAATATTTGAAAGTCATT
TCTCACCTACCTGATTTCACAACTCTCAAACATCGAAAATGGGAGTCTTA
TCTTCGACGTTATACATAA
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