EMLSAT00000003182, EMLSAT00000003182-699029 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003182
Unique NameEMLSAT00000003182-699029
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s176supercontigLSalAtl2s176:391877..393735 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003182 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003182EMLSAG00000003182-685948Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013931EMLSAE00000013931-722859Lepeophtheirus salmonisexon
EMLSAE00000013932EMLSAE00000013932-722860Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777207auto777207Lepeophtheirus salmonispolypeptide
EMLSAP00000003182EMLSAP00000003182Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003182

>EMLSAP00000003182 ID=EMLSAP00000003182|Name=EMLSAP00000003182|organism=Lepeophtheirus salmonis|type=polypeptide|length=107bp
MLVNENSLITAVEKLQKLSCILRKANELKNAVADFEEDEKRKKAFQTNVD
GMISYYGDIYESCTYNSHLYYFTTTFVQFHEAGSHHGFQATLKKLKRIYN
FAESGVN
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mRNA from alignment at LSalAtl2s176:391877..393735+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003182-699029 ID=EMLSAT00000003182-699029|Name=EMLSAT00000003182|organism=Lepeophtheirus salmonis|type=mRNA|length=1859bp|location=Sequence derived from alignment at LSalAtl2s176:391877..393735+ (Lepeophtheirus salmonis)
GAAGAGCGCGCCCTATCTTCAAAACATATAACCTCAAATTTGACATTATT
TAATATTTATTAATATAAATAAATGATTAAATTTAATCGGCAATCTAAAT
CTATTAATTTCTATATAATTGATAAGGATATGTATTCGTTGACTCCAATG
AATGTATAGTAATACTTATTATTTATCAACATTTGCATCCTGGGCAACCT
CGTAGAAAACCGTCTCCCTATAGAACTAATCAACCTATTATTATTTATTT
TACTAGGACTAGTATCATAGATTAGTTTAACGTTTCGATAGTTGTTCAAA
ATACCTCGAAAGGCTAAAGTTAAAGGTAATCATGAGAATAAGGCTGGGCA
ATCGCGCATACCAAAAAACATCACTATTCAAACTAAGCAAGAGATACTAG
CGGGGTTTGAAAGTGGAAAGAAAGTAATGGAGTTGGCTCGTTCCCACGAT
CTTCATGAATCCACGATAAGGATCATAAGAAAAAATAAACACCAGATTGA
GCTTACTGGCAATATTAATAAAACTGAACCTTTTTTTTTACGATTGGATT
ACTCATCCGACAAAAAAGGATTCAGTCTTACCTCTCACAATGCTCAAAAT
AAAGCTATTGCTAGTATATTTGAGAGTATTAAAAATGAAGAATAATCAGA
TAGTGCTTCGTGTTTAAATTTTGACGCCAGCGAGCCTTGGTTGAGAAAAT
TCCTTCAGAAATTCAATATACAATATCTAATACCGTAAGAAAAAGCTACG
AATACGACGGATGTAAAGGATCTATTTGAAACCGTTAACCATGAAGAAAT
TCCCTATCCATGGATAAAATCAGAAAATTGAATCAGATCCAATAGAAATG
TTAGTGAATGAAAATAGTTTAATTACAGCGGTTGAAAAGCTACAAAAACT
TTCGTGTATATTGAGAAAAGCTAATGAACTAAAAAATGCAGTTGCAGACT
TTGAGGAAGACGAAAAACGAAAGAAAGCCTTTCAAACAAATGTTGATGGA
ATGATTAGTTATTACGGGGACATTTATGAGGTACTACAAAAATAAATATG
AAAATTAAATAATATTGGTCAACTTCATAATTTTTTTAAATTTACAAGAT
ATTTCAGGCTCTGTGCATCTTCTTGAAAGTTGAGGGCCCAAAGACTTTGA
TATATATATATATAATTACATATTGTTATATGTTGAATGACCAACAGTCC
TAATTTTCCCGGACATCTTCTGTTTTACATCCTGTTGAGAACGTCCGGAA
GACGTTATATAAATTCAGGAAATGACCGGATTATTATGGGTTAAGTCGAT
TTTACCAATATAAAAAGATTACATGTTTGTGCAAAACAAGACGGTTCCCT
AATTTAATGTACAGTATGTATTTTCTCTAATAATATAAAAATATTAAATA
AGTAATTTTAAATATTAAAAAAATCAAAATCAATTTTTTTATGAAAAAAA
TCTAAGATAATAAATAAGAATCAAAATTTATAATTAAATTTTACTCATTT
AAAAATATTTACCCTCTTTTTCTAAAAACGACACTATATGGCCGATTCAT
GTCCTTTTTTAATGTAAATTCTCAAAAAAGTGGGGTGACAATGGAGCCTT
CTCATGTATTTATACCTAATAAAAATATATAGTGATGTAGCCACACTTAC
ATAATTAATTAATTAATTTATATATTATCTTTGCATTTATAATACTAATT
ATATTTACTTATTGTTAGTCATGTACGTATAATTCTCATCTGTATTATTT
TACGACTACGTTTGTGCAATTCCATGAAGCTGGTAGTCATCATGGATTTC
AGGCAACTTTGAAAAAATTAAAAAGAATATACAACTTTGCTGAGTCTGGA
GTAAATTAA
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