EMLSAT00000003212, EMLSAT00000003212-699059 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003212
Unique NameEMLSAT00000003212-699059
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s177supercontigLSalAtl2s177:349359..351240 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003212 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003212EMLSAG00000003212-685978Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014052EMLSAE00000014052-722980Lepeophtheirus salmonisexon
EMLSAE00000014053EMLSAE00000014053-722981Lepeophtheirus salmonisexon
EMLSAE00000014054EMLSAE00000014054-722982Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776695auto776695Lepeophtheirus salmonispolypeptide
EMLSAP00000003212EMLSAP00000003212Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003212

>EMLSAP00000003212 ID=EMLSAP00000003212|Name=EMLSAP00000003212|organism=Lepeophtheirus salmonis|type=polypeptide|length=119bp
MGRIFLEHLGGSRLFSCGHCDTFLTNKSELISTRFTGATGRAFLFKKVVN
LSYSEVQDRVMLTGRHMVRDVFCKKCDSKLGWMYEFATEENQRYKEGRVI
LERALVSECAGFEEHHVKN
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mRNA from alignment at LSalAtl2s177:349359..351240+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003212-699059 ID=EMLSAT00000003212-699059|Name=EMLSAT00000003212|organism=Lepeophtheirus salmonis|type=mRNA|length=1882bp|location=Sequence derived from alignment at LSalAtl2s177:349359..351240+ (Lepeophtheirus salmonis)
CATATTCTTTCTGTCACTTTTTCCTTGGTTCATTTTCATATATATTTCAT ATATTACTATTATTATTATATGTTTACTTATTACAACTTTCATAGTAAAT ACAATATTATACTTACCGTCAGTCAGAAGTGTTTCTTTGTTTCAAAGCTA TGGGTCGGATATTCTTAGAGCATTTGGGGGGATCCCGATTATTCTCTTGT GGGCATTGTGACACTTTTCTCACTAATAAATCTGAATTGATATCTACAAG GTTTACTGGAGCTACAGGAAGAGCCTTTTTATTCAAAAAGGTCGTTAATC TCAGTTATAGGTAATGAGTCAGCGTTTTTGTACCCTTAATCCTTGAGATT TATGTTGCGTATCAGTTATCAACAAAGATTTATCATGTTTGTTATTAATA ATGAGCATTAGATCATATGAATTATTGTTGACTAAATTAGAACAACCAAA ATTAATTCAATTTTCAATTTATTATATAGTGAAGTGCAGGATCGAGTCAT GTTGACGGGTCGTCATATGGTTCGAGATGTATTTTGTAAGAAATGTGATA GCAAATTGGGTTGGATGTATGAGTTCGCAACTGAAGAGAATCAAAGATAC AAAGAAGGTCGTGTGATTCTTGAAAGAGCTCTGGTCTCAGAATGTGCTGG ATTTGAAGAGCATCACGTCAAGAACTGAGAAGTGCATACTGACATACGTT TGTGTACATACATATCTTCCTTCCTCTCATATAAAATCTATTTCCCTTCA ACAATTTTACAAATTTATCTCTGACACAATACTTGCATTTAACCCTTATC TATATATATGTACAGTGAGAGAGAGGTATCCTATCTATTAATTGTTTTCA ATGATATTTCGGAACCATCCAAGTGTCATGAGTGATTTATTTATTAATTT TATAATTGACATTTCAATTAATTTCATGTCTCCATGTTTAAGGGAATTTT TGATGAAATTTAGGATTATTCATCTGTGAAACAATTAAAGCCGTATAGTC AAACTAGCACTCTGTAACTAATTAAATATTAACTACATTGTGAGAGTTAT TTTTTTTTTTTTTAAATTACTTCATTTACCAAGCTTATCCCCATCGCCAA TTTTTGTGATTTTCCGTAAAATGAAGACTTTAGCTTGCAAATTCTAAAAA AATAAATACAATATTACCTCAATGACTCAAAGGTTAACTTTGTGCGTTCT TCGTTCCGAATCGGTATTTGAAGTTGATCCCCACATGAACCATGCTAGGA AAACATTTCTTCAAATGGGAGTAGAAGTAATCATATTCATGCCTTATAGT ATAGCTTGTTATAAGTGTCCCACCTAACTTGACTGACAAAAAGTAACTTT TCTTTCTATCTTTGCATGTAAATTTTTAATTTATTTGAACTTGAATGATC TATGGCTTTTTAACCATTTTTCGTTGTTGTTTTTTGTGTGTATGTGATGT TCTTGTATTTTCTTTCTCTGAGTAAATTCTAACAATATGTACTTATTACT TAGTTAATAATAACTGTCTAGTTTTTATCAATGTTACTCTTTGTATTAAA TCTTTAAATACAAATGTGTAAATATTATTATATTCAAAAATGTTATGTTG TGCAAACCTTGTTAATTTTTTTTATATATATTTTGATCATCATTATTTTG CTACCTTATTGTGTTCTTTGTTAGATTTTTAAAAAATATAGAAAGTTTCG TTAAAAATTAAAGTTGTAAAAATATACAAAATATGTAGACACCACTTGTA AGATTCAATTTAAGTTATGTTTTTTTTTTTTTCAGAATACTTCATTTTTT CGAGATCCAAAATCATCCTATAAACCATTTGTATAAATATAGAACTCAAA CAAACTTCTTTGTGTCTAATCTCCAAGAAAAT
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