EMLSAT00000003224, EMLSAT00000003224-699071 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003224
Unique NameEMLSAT00000003224-699071
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s177supercontigLSalAtl2s177:512114..513783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003224 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003224EMLSAG00000003224-685990Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014116EMLSAE00000014116-723044Lepeophtheirus salmonisexon
EMLSAE00000014117EMLSAE00000014117-723045Lepeophtheirus salmonisexon
EMLSAE00000014118EMLSAE00000014118-723046Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778298auto778298Lepeophtheirus salmonispolypeptide
EMLSAP00000003224EMLSAP00000003224Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003224

>EMLSAP00000003224 ID=EMLSAP00000003224|Name=EMLSAP00000003224|organism=Lepeophtheirus salmonis|type=polypeptide|length=507bp
MAXIRYIIFFVISVLFLILGIILSYLKDDIFRNVFRRFMMLQENSPSIAF
WKDIPFPLELKAFLWNVSNPEEVKNGLEAPKLTEIGPFVFREYRNKSGIH
WNHLNGTVSYRQTRHWVFDASSSLPLDTLVTILNVPAAAVSKNFFHMNPI
LRPAASLFLLAIKEKLFVTQEAGDIIFNGYKDPLLTEASKFHPMPGVQDK
FAIFYKRNNSADFDGVFNIYTGELGLDKFGTVAKWNYKNSTGLFPSPCGD
LRGGVDYLPPFEDNKEELEIYSTDLCRPLRVELKNRASKTDSHVSVHEYH
LNSTIFYGNSSLNPSNKCYEGGNSLPSGVFNASSCHFGAPIFISNPHFFE
ADPFYSSQFKDGSMQPNVSKHESYLKIEPITGLLMEVHIKSQFNVYLRHV
PMIEMFSNINNTYFPIAWFDYSMKVGPEMSLKIWIXSNLPFIFIVAGLSI
LSLGLGNIILGAIFLRAAIVAEKKGNENNRLIIDDAITQESVEDDQVSDH
LVDRSQS
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mRNA from alignment at LSalAtl2s177:512114..513783-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003224-699071 ID=EMLSAT00000003224-699071|Name=EMLSAT00000003224|organism=Lepeophtheirus salmonis|type=mRNA|length=1670bp|location=Sequence derived from alignment at LSalAtl2s177:512114..513783- (Lepeophtheirus salmonis)
ATGGCTCSAATACGATATATTATATTTTTTGTAATATCTGTATTATTCCT AATCCTTGGCATTATTCTCTCCTATCTTAAAGATGACATTTTTCGTAATG TATTCCGTCGATTTATGATGCTTCAGGAAAATTCGCCCAGTATCGCATTT TGGAAGGATATTCCGTTTCCATTAGAACTAAAAGCATTCCTTTGGAACGT CTCCAATCCAGAGGAAGTTAAAAATGGTAACTTGTTCTAGCCCTGATTTT TACCAATGGAATTTCCGATTTAATTATTTATTAATTCTTATTTCATTGTA CCAGGATTGGAAGCACCCAAACTAACTGAAATTGGCCCTTTTGTGTTTCG TGAATATCGTAACAAGTCCGGAATACATTGGAATCATTTAAATGGTACCG TCTCATACAGACAAACGAGACATTGGGTATTTGATGCTAGTTCAAGTTTG CCCCTTGATACTCTTGTTACAATTTTAAACGTTCCAGCAGCTGCAGTCTC CAAAAACTTTTTCCATATGAATCCCATTCTACGGCCTGCTGCATCTTTAT TTCTTTTAGCGATCAAGGAAAAATTATTTGTTACACAAGAAGCTGGTGAT ATCATTTTTAATGGTAAGGATTTTTTTTTAACATATATAAATTGTGCACC GTTTTAGATTATTCTTTCCCCCTTTTTTTAGGTTATAAGGATCCTCTTTT AACGGAAGCTTCTAAATTTCACCCCATGCCTGGTGTTCAGGACAAATTTG CTATATTTTATAAGCGTAACAACTCTGCAGATTTTGATGGAGTATTCAAT ATTTATACAGGAGAGTTAGGGTTAGATAAGTTTGGAACTGTGGCTAAATG GAATTATAAAAACTCAACAGGGTTATTTCCATCACCTTGTGGAGATTTAA GAGGAGGTGTTGATTATCTTCCTCCTTTTGAAGATAATAAGGAAGAACTG GAAATTTATTCAACTGATTTATGTAGGCCTTTACGGGTCGAGTTAAAAAA TAGAGCTTCCAAGACTGATAGTCATGTCTCTGTGCATGAATACCATCTTA ACAGTACTATTTTTTACGGTAATTCTTCTCTTAATCCAAGTAATAAATGC TATGAAGGAGGGAATTCCCTTCCCAGTGGTGTATTTAATGCCTCTTCTTG TCACTTTGGAGCTCCGATTTTTATCTCTAATCCTCATTTCTTTGAAGCGG ATCCTTTCTATAGTAGTCAATTCAAAGATGGAAGCATGCAACCTAACGTT TCAAAGCATGAATCATATCTTAAAATTGAACCTATAACTGGTTTACTCAT GGAAGTACATATTAAGAGTCAATTCAATGTGTACCTTCGACATGTTCCTA TGATTGAAATGTTCTCCAATATCAATAATACATACTTTCCCATAGCATGG TTTGATTATTCTATGAAAGTTGGACCCGAAATGTCGTTAAAAATATGGAT AMTAAGTAATCTTCCTTTCATATTTATAGTAGCAGGATTGTCTATCTTAT CTCTTGGTCTTGGAAATATAATACTTGGTGCTATTTTCTTAAGGGCTGCA ATAGTGGCAGAAAAGAAGGGAAATGAAAATAATCGTTTAATTATTGATGA TGCTATTACACAGGAAAGTGTTGAGGATGATCAAGTTTCTGATCATTTGG TGGATAGGTCACAAAGTTAG
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