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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s178 | supercontig | LSalAtl2s178:234011..239421 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003242 >EMLSAP00000003242 ID=EMLSAP00000003242|Name=EMLSAP00000003242|organism=Lepeophtheirus salmonis|type=polypeptide|length=1341bp
MEATTLLENEDYPLAFIRPRHKMRISKEDESQDSSSTAATPWRLLERMKT
VSVALVVCLNVGVDPPDVTKTSPCACIEAWIDPTLLNPTRALNLIGSALL
RQYERWQPRARYRQSLDPTVDEVRRLAMALRKNARDERVLFHYNGHGVPK
PTANGEIWVFNRNYTQYIPLSLYDLQTWMGSPSIFVYDCSNAGIIVIAFE
QFARQHEKEYMEQVNSQGINSSSIPAPPGSPRNCIQLAACSANELLPMNP
ELPADLFTSXLTTPVKIVLRWFILQNKGKITPNVTLDMLDKIPGQLNDRR
TMLGELNWIFTAITDTIAWNTLSRDLFQKLFRQDLLVASLFRNFLLAERI
MRSYDCTPVSQPKLPPTHQHPMWQAWDLAVDMSLSQLPGIIDQKKSYVSS
SFFEEQLTAFQVWLKYGRDNRKPPEQLPIVLQVLLSQDHRLRALDLLSRF
LDLGPWAVNLALCVGIFPYVLRLLQSSARELRPLLVSIWTKILAXDSSCQ
ADLARENCHNYFLLVLKDPIMMPEHRTGAAFVLASMVYNYKIGQRQAEHG
NLISICLEQLDDHEPVLRQWLAIALGRVWDNHEPAKWRGARDNVHERLYE
LLNDPFPEVRTAAVFALGTFIHSTNDYTPNTHAESLDHKIALYLLNTVAE
DASPMVRMELVVAIQWLVYAFEVNFINVIKGEKQQNAAVNKMPQTSNTLT
PNMKRVSRIXASASSPSLDRLVQQTSKVSITSSTPSAISSYGGVYCKIYA
GLVSLSIDPFDDVASMANQLLQYLKCRERERNSSKNLKDSSSSSSFSXPA
TRKVSATPIMQSSICEGKSSSSVPSSPANSNNSFLSAAKLESKAPSSSRK
VKRRSSGEGVAGVDVIAGSNNYNTLPRNGRQHHPATPNSLQHLDLLSSSP
TNTSMTTLVEKPCLSTEFVEWSSTYFSNELMKSDCTNTEPDLESPYHWER
DWLNKRNDSIRFKASEQSQKFTYGVRNGNGGKIEEQLSVIRFSEPAYSLK
FHPFNNYLAVGSKSIVNIYDIGTGAKVSSLSFSQNKSSRVTAIEYINAHE
KAMLIAGSDDGSVRIWRDFDVEPALVTAWFAMPDLCSTTSKRVTGPLYGS
KHGNSNGNNGGIKICWESVNRCLIAGGGDSRAIRLWDAEKELKIHEWTXS
PETYVTHISCXDSTPWVYAVGFSDGSIRIMDKRLSTSCTQIYREHNXAIL
DLKLRGGIDGHSSPGSMVAGAGDGXIRFYEPRALSSCRTVQISDGGPRAS
GGNHSISSLSIHERAQIAASWTSSQVCSIHSLLSNGPQINAIKYYDGILG
QRLVNVKSLQFHPHLMTLGVYARGASTTDSSITSFGFRSSS back to topmRNA from alignment at LSalAtl2s178:234011..239421+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003242-699089 ID=EMLSAT00000003242-699089|Name=EMLSAT00000003242|organism=Lepeophtheirus salmonis|type=mRNA|length=5411bp|location=Sequence derived from alignment at LSalAtl2s178:234011..239421+ (Lepeophtheirus salmonis)
TTTTCATCTATTCTCTACACATTTAGTATTTAATGCGTAGAACTCGAGGA
AAAATAGAAGGTTTCAATTAGGAAAAGAGTGAGTGAGAGAGAGAGGCACA
CACACACAAACATATATAGAAAGAGAGGGAGAGAGAAAGAAAGGAAGTAA
GGAAAAAGAAGTGACGGAAAAGTAATTTTATAAAATTAAATAAAACTATT
AATTACTGCTTAAAGTGAGGTATTAGTCTGGCAAAGCTGAACCCATCTAG
CCAAGCAACATTCCCATGTGGATCCGAGTCATTGTGGATGATTAAACATG
TCGACGACTTGTTGTCTGAATTTGGAATTCAGCGGAGGAGCGGAATCGTT
ACTAAATTCAAGTTACAGTGAGAAGAGAGGGATTTTCGGAGTGGAGGTGG
AGATTTCATCTGATTCAGTTGGATCCGGGATTACTCTTGCAGATCTTTTG
CTCTGGATTAAAAAGAATCTCTTGATCGAAGAGAAAGTATCTTTATTTCT
GCGAAAGGGAACAGTGCGGCCCGGGATCCTTGTGCTCATCAACCAAGAGG
ATTGGGAACTCTGTGAGAAAGAAGAAACCCTACTGAAATCCCAGGATCAA
ATTTCTTTTATTTCCACTCTGCACGGTGGATAAGAAGGTCCGTCACCCTC
CTTGAATTCTCATAACTCCTTATTCTAGTACTTTTAAGTTTTATCGCACT
CCAAATCCTCCAATTTTAAAATGGAAGCAACAACACTGTTAGAAAATGAG
GATTATCCATTGGCTTTCATTCGACCAAGACATAAGATGCGGATTTCGAA
AGAAGACGAGTCTCAAGATTCCTCCTCAACTGCCGCTACTCCTTGGAGAC
TCCTTGAACGAATGAAAACTGTGAGTGTTGCTCTTGTGGTATGCCTCAAT
GTCGGGGTGGATCCTCCGGATGTGACGAAAACCTCCCCTTGTGCTTGTAT
TGAGGCATGGATTGATCCAACTCTTCTCAATCCAACAAGAGCACTTAATC
TCATTGGATCTGCTCTTCTAAGACAATATGAACGTTGGCAACCCAGGGCT
AGGTATAGACAATCTTTGGACCCAACTGTGGACGAAGTCCGACGCCTAGC
TATGGCTCTACGTAAAAACGCTAGGGATGAAAGAGTTCTTTTTCATTATA
ATGGTCATGGGGTCCCGAAACCAACGGCAAACGGAGAGATTTGGGTTTTT
AATCGGAATTACACTCAGTATATTCCCCTGAGTCTCTACGATCTTCAAAC
ATGGATGGGCTCCCCATCTATATTTGTCTATGATTGTTCTAATGCGGGTA
TAATTGTTATTGCTTTTGAACAGTTTGCACGCCAGCACGAGAAGGAATAT
ATGGAGCAGGTAATATTAATGCTTCTAATATGTCATGCTTTAAGTTAAAT
ACGCCTTTTCTTGTTTTTTCATCTTCAAATTGTCACTTCATTTATTTATT
AGTAACTATCTCTTTCATTGAAAAAGAAACTTCATCATTCAGTAGCAAGT
TTATATAAAAATATTGTTTTTTAAATAAATATTTGCTTAGTATACTAAAT
GAAATAACACATGCTCAGATGAAACTACTAAAAATGAATGTTAGTACGTA
TAATCTAATATTCTTATATGAAGACACAAATTAATATTAACTTAATACTA
ACAACGCTTTTATCATGCTTCCAGGTAAATTCTCAAGGAATCAATTCCTC
TTCAATTCCAGCACCCCCAGGGTCTCCTAGAAACTGTATTCAGTTAGCTG
CTTGTTCAGCAAACGAGCTTCTGCCAATGAATCCGGAGCTTCCTGCAGAC
TTGTTTACGTCTTMCTTGACAACACCRGTTAAAATAGTTCTCCGTTGGTT
TATATTACAAAATAAAGGGAAAATTACTCCTAATGTAACTCTCGACATGT
TAGATAAAATACCTGGCCAATTAAATGATCGTCGTACTATGTTAGGCGAA
CTAAATTGGATTTTTACAGCTATAACTGACACCATTGCTTGGAATACTCT
TAGTCGTGACCTATTTCAGAAACTTTTTCGTCAGGATTTATTGGTTGCGT
CCCTGTTTAGAAATTTTCTTTTAGCAGAAAGGATAATGCGATCCTATGAT
TGCACTCCAGTTTCTCAACCTAAGCTKCCTCCCACACATCAGCATCCTAT
GTGGCAGGCTTGGGACTTGGCAGTAGATATGTCCCTGTCACAGTTACCTG
GCATTATTGATCAAAAGAAATCTTACGTATCCTCTTCCTTCTTTGAAGAA
CAACTGACTGCTTTTCAAGTATGGTTGAAATATGGTCGAGATAATCGTAA
ACCTCCTGAACAATTACCTATTGTCCTCCAAGTCCTCTTAAGTCAAGATC
ACCGTTTGAGAGCTTTAGATTTGCTCAGTCGGTTTTTGGATTTGGGGCCA
TGGGCTGTGAACTTGGCATTATGTGTGGGAATATTTCCATATGTACTCCG
TCTTCTGCAATCATCTGCAAGAGAGCTTCGACCTTTATTAGTATCTATAT
GGACAAAAATATTGGCTGMTGATTCTTCTTGTCAAGCAGATCTTGCACGG
GAGAACTGCCATAATTATTTTCTGCTTGTTCTCAAAGATCCAATCATGAT
GCCTGAACATCGCACAGGTGCTGCATTTGTGCTTGCATCTATGGTCTATA
ATTATAAAATTGGGCAGAGACAAGCAGAACATGGAAATCTTATATCAATT
TGCTTAGAACAACTGGATGATCATGAACCCGTTTTGAGGCAATGGTTAGC
CATTGCCCTTGGTAGAGTATGGGATAATCATGAACCAGCTAAATGGAGAG
GAGCTAGAGATAACGTGCATGAAAGATTGTACGAATTACTCAACGATCCT
TTTCCAGAAGTTCGTACCGCTGCGGTATTTGCTCTAGGTAATTTTTGCAC
CTCTCTCAATCTCTATTTATGTATAATAATTAATACTAGTCTCCCTCGTT
TTATGGGTATTTTTTTATTATTGCACTTTTTGTCTTTTCTGCTAAAACTT
CATCTGGAAAATAATGCAAGTTTAGTTTTTAAAAAAAAAGTTCCCCCCCC
CCCTAGCACRCTAATATACAAAAGTAAATACTAATATTATAATTTGTACT
ATCATTTTTTCAGGAACGTTTATTCATTCCACAAATGATTATACTCCAAA
TACCCATGCTGAAAGTTTGGATCACAAAATTGCCCTATACCTCCTGAATA
CTGTTGCTGAAGACGCAAGCCCAATGGTTCGTATGGAATTGGTTGTTGCA
ATTCAATGGCTTGTTTATGCCTTTGAAGTTAATTTTATCAATGTTATTAA
AGGGGAAAAACAGCAAAATGCTGCCGTCAATAAAATGCCCCAAACTAGCA
ATACTCTCACTCCTAATATGAAAAGAGTTTCACGAATTKAAGCCAGTGCT
TCCTCACCTTCTTTGGATCGACTTGTTCAACAAACTTCTAAAGTTTCTAT
AACCTCAAGGTTTGTGCTATTATTACTGTTATAATGTTTTTGATACAAAT
AATATGATTTATTTCATAGCACTCCAAGTGCTATATCTAGTTATGGTGGT
GTATATTGTAAAATTTATGCTGGACTTGTGAGTCTATCAATTGATCCTTT
TGATGATGTAGCCTCAATGGCAAATCAGCTCCTTCAATACCTCAAATGCC
GTGAACGTGAGAGAAATTCTTCTAAAAATTTAAAGGATTCTTCCTCCAGC
TCATCATTTTCTKCTCCTGCTACTCGTAAAGTTTCAGCTACTCCAATAAT
GCAGAGTAGTATTTGCGAGGGGAAATCCTCATCCAGTGTTCCTTCATCTC
CAGCTAACTCGAATAACTCATTTCTGTCAGCAGCAAAACTAGAAAGTAAA
GCTCCTTCGTCCTCGAGAAAAGTGAAACGAAGGAGCTCAGGCGAAGGGGT
CGCCGGAGTAGATGTAATTGCTGGCTCTAATAACTACAACACACTTCCAA
GAAATGGTCGACAACACCACCCCGCAACTCCAAATTCATTACAGGTACTT
GAATTTGTAATATTGTTGTATTTTGATTTAATTATATTTGTATAATTTTT
TTAAATAGCATCTCGATTTACTTTCCTCATCTCCAACAAATACATCTATG
ACAACTCTCGTAGAGAAACCATGTTTATCGACAGAGTTTGTGGAGTGGTC
CTCAACCTATTTTTCCAATGAATTGATGAAAAGTGATTGTACAAATACTG
AGCCTGATTTAGAGTCACCATATCACTGGGAAAGGGATTGGCTAAACAAA
CGAAATGATTCTATTCGCTTTAAGGCTTCTGAACAATCTCAAAAGTTTAC
TTACGGAGTTCGTAATGGAAATGGGGGTAAAATTGAGGAACAATTGTCTG
TGATACGATTTTCTGAGCCTGCATATTCTCTTAAATTTCATCCCTTTAAT
AATTATCTGGCTGTTGGTTCAAAATCAATTGTCAACATTTATGATATAGG
GACTGGAGCTAAAGTATCTTCCCTTTCATTCAGTCAAAATAAGTCGAGTC
GTGTCACTGCCATAGAATATATCAATGCTCATGAGAAAGCTATGCTCATT
GCTGGGTCGGATGACGGATCTGTGCGTATTTGGCGAGACTTTGATGTAGA
GCCCGCTCTAGTTACTGCATGGTTCGCTATGCCAGATTTGTGTAGTACTA
CATCCAAACGTGTAACTGGACCTTTGTATGGAAGTAAACATGGCAATTCA
AATGGCAATAATGGAGGGATTAAAATTTGTTGGGAATCTGTTAATCGTTG
TCTAATTGCTGGTGGCGGAGATTCCCGTGCTATTCGGCTATGGGATGCAG
AAAAAGAGCTTAAAATTCATGAGTGGACGGMATCTCCGGAAACTTATGTC
ACTCATATATCTTGTKCCGATTCTACTCCTTGGGTATATGCTGTAGGCTT
TAGTGATGGCTCAATTCGAATAATGGACAAGCGACTCTCCACTTCTTGTA
CTCAGATATATCGTGAGCATAATKCAGCCATTTTGGATTTAAAGCTTCGG
GGTGGTATCGACGGACATTCTTCACCGGGTAGTATGGTAGCTGGGGCTGG
AGATGGGYTCATTCGCTTTTATGAACCTCGCGCTCTCTCTTCATGTCGAA
CAGTTCAAATTAGTGATGGAGGCCCTCGAGCATCGGGCGGAAATCACTCA
ATTTCGTCCCTTAGTATACATGAGAGAGCTCAAATTGCTGCATCTTGGAC
ATCGTCTCAAGTCTGTTCAATACATTCACTCCTTTCCAACGGACCTCAAA
TCAATGCTATAAAGTACTATGACGGTATTCTAGGTCAAAGACTCGTCAAC
GTTAAGTCCCTCCAGTTCCATCCTCATCTTATGACTTTAGGAGTCTATGC
GAGGGGAGCATCTACTACGGACTCCTCTATTACATCCTTCGGTTTTCGTA
GTTCTTCCTGA back to top
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